RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 CCDC114Q96M63 670 aa21.1■□□□□ 0.97
OTUB1-211ENST00000543004 HHIPQ96QV1 700 aa21.1■□□□□ 0.97
OTUB1-211ENST00000543004 MKRN2Q9H000 416 aaKnown RBP21.1■□□□□ 0.97
OTUB1-211ENST00000543004 KLHL8Q9P2G9 620 aaPredicted RBP21.1■□□□□ 0.97
OTUB1-211ENST00000543004 SARDHQ9UL12 918 aa21.1■□□□□ 0.97
OTUB1-211ENST00000543004 KMT2EQ8IZD2 1858 aa21.09■□□□□ 0.97
OTUB1-211ENST00000543004 TARSL2A2RTX5 802 aaKnown RBP21.09■□□□□ 0.97
OTUB1-211ENST00000543004 ATG13O75143 517 aa21.09■□□□□ 0.97
OTUB1-211ENST00000543004 NEBLO76041 1014 aa21.09■□□□□ 0.97
OTUB1-211ENST00000543004 GSRP00390 522 aa21.09■□□□□ 0.97
OTUB1-211ENST00000543004 ZSCAN5DPP0CG00 497 aa21.09■□□□□ 0.97
OTUB1-211ENST00000543004 COILP38432 576 aaPredicted RBP21.09■□□□□ 0.97
OTUB1-211ENST00000543004 METAP1P53582 386 aa21.09■□□□□ 0.97
OTUB1-211ENST00000543004 SNRPD1P62314 119 aaKnown RBP21.09■□□□□ 0.97
OTUB1-211ENST00000543004 E2F5Q15329 346 aa21.09■□□□□ 0.97
OTUB1-211ENST00000543004 ANKRD20A2Q5SQ80 823 aa21.09■□□□□ 0.97
OTUB1-211ENST00000543004 ANKRD20A1Q5TYW2 823 aa21.09■□□□□ 0.97
OTUB1-211ENST00000543004 ANKRD20A3Q5VUR7 823 aa21.09■□□□□ 0.97
OTUB1-211ENST00000543004 CCDC137Q6PK04 289 aaKnown RBP21.09■□□□□ 0.97
OTUB1-211ENST00000543004 PID1Q7Z2X4 250 aa21.09■□□□□ 0.97
OTUB1-211ENST00000543004 BMP8AQ7Z5Y6 402 aa21.09■□□□□ 0.97
OTUB1-211ENST00000543004 KLHL7Q8IXQ5 586 aa21.09■□□□□ 0.97
OTUB1-211ENST00000543004 TAB3Q8N5C8 712 aaPredicted RBP21.09■□□□□ 0.97
OTUB1-211ENST00000543004 GRIN3AQ8TCU5 1115 aa21.09■□□□□ 0.97
OTUB1-211ENST00000543004 GDAP1L1Q96MZ0 367 aa21.09■□□□□ 0.97
OTUB1-211ENST00000543004 SEMA3CQ99985 751 aa21.09■□□□□ 0.97
OTUB1-211ENST00000543004 ZDHHC6Q9H6R6 413 aa21.09■□□□□ 0.97
OTUB1-211ENST00000543004 HOMER3Q9NSC5 361 aa21.09■□□□□ 0.97
OTUB1-211ENST00000543004 DRG1Q9Y295 367 aaKnown RBP21.09■□□□□ 0.97
OTUB1-211ENST00000543004 GOLGA6L10A0A0M3HER8 536 aa21.08■□□□□ 0.97
OTUB1-211ENST00000543004 TCRBV21S2A2A0A5A6 115 aa21.08■□□□□ 0.97
OTUB1-211ENST00000543004 MTSS1O43312 755 aa21.08■□□□□ 0.97
OTUB1-211ENST00000543004 IGSF6O95976 241 aa21.08■□□□□ 0.97
OTUB1-211ENST00000543004 IFNB1P01574 187 aa21.08■□□□□ 0.97
OTUB1-211ENST00000543004 RECQLP46063 649 aaPredicted RBP21.08■□□□□ 0.97
OTUB1-211ENST00000543004 C2orf54Q08AI8 447 aa21.08■□□□□ 0.97
OTUB1-211ENST00000543004 STARD3Q14849 445 aa21.08■□□□□ 0.97
OTUB1-211ENST00000543004 MYLK3Q32MK0 819 aa21.08■□□□□ 0.97
OTUB1-211ENST00000543004 POM121L1PQ3SYA9 428 aa21.08■□□□□ 0.97
OTUB1-211ENST00000543004 BBS5Q8N3I7 341 aa21.08■□□□□ 0.97
OTUB1-211ENST00000543004 SPATA4Q8NEY3 305 aa21.08■□□□□ 0.97
OTUB1-211ENST00000543004 ARRDC2Q8TBH0 407 aa21.08■□□□□ 0.97
OTUB1-211ENST00000543004 NOD2Q9HC29 1040 aa21.08■□□□□ 0.97
OTUB1-211ENST00000543004 WASF2Q9Y6W5 498 aa21.08■□□□□ 0.97
OTUB1-211ENST00000543004 PIGNO95427 931 aa21.07■□□□□ 0.96
OTUB1-211ENST00000543004 NFKB1P19838 968 aa21.07■□□□□ 0.96
OTUB1-211ENST00000543004 NSUN2Q08J23 767 aaKnown RBP eCLIP21.07■□□□□ 0.96
OTUB1-211ENST00000543004 ELAVL3Q14576 367 aaKnown RBP21.07■□□□□ 0.96
OTUB1-211ENST00000543004 ARSIQ5FYB1 569 aa21.07■□□□□ 0.96
OTUB1-211ENST00000543004 DNTTIP2Q5QJE6 756 aaKnown RBP21.07■□□□□ 0.96
OTUB1-211ENST00000543004 SRLQ86TD4 932 aa21.07■□□□□ 0.96
OTUB1-211ENST00000543004 MMAAQ8IVH4 418 aaKnown RBP21.07■□□□□ 0.96
OTUB1-211ENST00000543004 POLR1EQ9GZS1 481 aaKnown RBP21.07■□□□□ 0.96
OTUB1-211ENST00000543004 GLOD4Q9HC38 313 aa21.07■□□□□ 0.96
OTUB1-211ENST00000543004 SPATA6Q9NWH7 488 aaPredicted RBP21.07■□□□□ 0.96
OTUB1-211ENST00000543004 C5orf60A6NFR6 353 aa21.07■□□□□ 0.96
OTUB1-211ENST00000543004 LEFTY1O75610 366 aa21.07■□□□□ 0.96
OTUB1-211ENST00000543004 MMP2P08253 660 aa21.07■□□□□ 0.96
OTUB1-211ENST00000543004 GABRG2P18507 467 aa21.07■□□□□ 0.96
OTUB1-211ENST00000543004 CHRNA3P32297 505 aa21.07■□□□□ 0.96
OTUB1-211ENST00000543004 PXNP49023 591 aaPredicted RBP21.07■□□□□ 0.96
OTUB1-211ENST00000543004 MRPS25P82663 173 aaKnown RBP21.07■□□□□ 0.96
OTUB1-211ENST00000543004 GSTA5Q7RTV2 222 aa21.07■□□□□ 0.96
OTUB1-211ENST00000543004 OR2T3Q8NH03 318 aa21.07■□□□□ 0.96
OTUB1-211ENST00000543004 SPATA22Q8NHS9 363 aa21.07■□□□□ 0.96
OTUB1-211ENST00000543004 HMGB4Q8WW32 186 aa21.07■□□□□ 0.96
OTUB1-211ENST00000543004 OR8D1Q8WZ84 308 aa21.07■□□□□ 0.96
OTUB1-211ENST00000543004 RTP4Q96DX8 246 aa21.07■□□□□ 0.96
OTUB1-211ENST00000543004 SPATA13Q96N96 652 aa21.07■□□□□ 0.96
OTUB1-211ENST00000543004 NUDCD1Q96RS6 583 aa21.07■□□□□ 0.96
OTUB1-211ENST00000543004 GORASP1Q9BQQ3 440 aa21.07■□□□□ 0.96
OTUB1-211ENST00000543004 HEPHQ9BQS7 1158 aa21.07■□□□□ 0.96
OTUB1-211ENST00000543004 RSPH9Q9H1X1 276 aaPredicted RBP21.07■□□□□ 0.96
OTUB1-211ENST00000543004 SCUBE2Q9NQ36 999 aa21.07■□□□□ 0.96
OTUB1-211ENST00000543004 UBP1Q9NZI7 540 aa21.07■□□□□ 0.96
OTUB1-211ENST00000543004 IL36AQ9UHA7 158 aa21.07■□□□□ 0.96
OTUB1-211ENST00000543004 CFAP69A5D8W1 941 aa21.06■□□□□ 0.96
OTUB1-211ENST00000543004 IL1BP01584 269 aa21.06■□□□□ 0.96
OTUB1-211ENST00000543004 NDUFV2P19404 249 aa21.06■□□□□ 0.96
OTUB1-211ENST00000543004 STIP1P31948 543 aaKnown RBP21.06■□□□□ 0.96
OTUB1-211ENST00000543004 HSPA9P38646 679 aaKnown RBP21.06■□□□□ 0.96
OTUB1-211ENST00000543004 CXCL12P48061 93 aa21.06■□□□□ 0.96
OTUB1-211ENST00000543004 TRIP13Q15645 432 aaPredicted RBP21.06■□□□□ 0.96
OTUB1-211ENST00000543004 WHAMMP3Q1A5X7 153 aa21.06■□□□□ 0.96
OTUB1-211ENST00000543004 ALG1LQ6GMV1 187 aa21.06■□□□□ 0.96
OTUB1-211ENST00000543004 ANO7Q6IWH7 933 aa21.06■□□□□ 0.96
OTUB1-211ENST00000543004 NCEH1Q6PIU2 408 aa21.06■□□□□ 0.96
OTUB1-211ENST00000543004 TSSK4Q6SA08 328 aa21.06■□□□□ 0.96
OTUB1-211ENST00000543004 TMPRSS6Q8IU80 811 aa21.06■□□□□ 0.96
OTUB1-211ENST00000543004 CAMK1DQ8IU85 385 aa21.06■□□□□ 0.96
OTUB1-211ENST00000543004 PLPP6Q8IY26 295 aa21.06■□□□□ 0.96
OTUB1-211ENST00000543004 ATL2Q8NHH9 583 aa21.06■□□□□ 0.96
OTUB1-211ENST00000543004 RBM15Q96T37 977 aaKnown RBP eCLIP21.06■□□□□ 0.96
OTUB1-211ENST00000543004 VAT1Q99536 393 aa21.06■□□□□ 0.96
OTUB1-211ENST00000543004 CD93Q9NPY3 652 aa21.06■□□□□ 0.96
OTUB1-211ENST00000543004 AMACRQ9UHK6 382 aa21.06■□□□□ 0.96
OTUB1-211ENST00000543004 PPM1HQ9ULR3 514 aa21.06■□□□□ 0.96
OTUB1-211ENST00000543004 PCDHGC4Q9Y5F7 938 aa21.06■□□□□ 0.96
OTUB1-211ENST00000543004 PLK4O00444 970 aa21.05■□□□□ 0.96
OTUB1-211ENST00000543004 GCATO75600 419 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms