RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 NTRK1P04629 796 aa9.11□□□□□ -0.95
UBC-211ENST00000542416 ALPIP09923 528 aa9.11□□□□□ -0.95
UBC-211ENST00000542416 SERPINH1P50454 418 aaKnown RBP9.11□□□□□ -0.95
UBC-211ENST00000542416 DNA2P51530 1060 aa9.11□□□□□ -0.95
UBC-211ENST00000542416 GEMIN4P57678 1058 aaKnown RBP9.11□□□□□ -0.95
UBC-211ENST00000542416 FGL2Q14314 439 aa9.11□□□□□ -0.95
UBC-211ENST00000542416 ELOCQ15369 112 aa9.11□□□□□ -0.95
UBC-211ENST00000542416 TAF5Q15542 800 aa9.11□□□□□ -0.95
UBC-211ENST00000542416 CARD16Q5EG05 197 aa9.11□□□□□ -0.95
UBC-211ENST00000542416 PRRT3Q5FWE3 981 aa9.11□□□□□ -0.95
UBC-211ENST00000542416 ZNF574Q6ZN55 896 aaPredicted RBP9.11□□□□□ -0.95
UBC-211ENST00000542416 RAB11FIP2Q7L804 512 aa9.11□□□□□ -0.95
UBC-211ENST00000542416 SLC26A9Q7LBE3 791 aa9.11□□□□□ -0.95
UBC-211ENST00000542416 ARHGEF19Q8IW93 802 aa9.11□□□□□ -0.95
UBC-211ENST00000542416 FBXO39Q8N4B4 442 aa9.11□□□□□ -0.95
UBC-211ENST00000542416 CHST14Q8NCH0 376 aa9.11□□□□□ -0.95
UBC-211ENST00000542416 C1orf131Q8NDD1 294 aaKnown RBP9.11□□□□□ -0.95
UBC-211ENST00000542416 ZNF397Q8NF99 534 aaPredicted RBP9.11□□□□□ -0.95
UBC-211ENST00000542416 ISG20Q96AZ6 181 aaKnown RBP9.11□□□□□ -0.95
UBC-211ENST00000542416 TMEM159Q96B96 161 aa9.11□□□□□ -0.95
UBC-211ENST00000542416 KREMEN1Q96MU8 473 aa9.11□□□□□ -0.95
UBC-211ENST00000542416 TMEM74Q96NL1 305 aa9.11□□□□□ -0.95
UBC-211ENST00000542416 CPXM1Q96SM3 734 aa9.11□□□□□ -0.95
UBC-211ENST00000542416 KLF6Q99612 283 aaPredicted RBP9.11□□□□□ -0.95
UBC-211ENST00000542416 CCDC3Q9BQI4 270 aa9.11□□□□□ -0.95
UBC-211ENST00000542416 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.11□□□□□ -0.95
UBC-211ENST00000542416 TKTL2Q9H0I9 626 aa9.11□□□□□ -0.95
UBC-211ENST00000542416 TNKS2Q9H2K2 1166 aa9.11□□□□□ -0.95
UBC-211ENST00000542416 GOLPH3LQ9H4A5 285 aa9.11□□□□□ -0.95
UBC-211ENST00000542416 RETREG1Q9H6L5 497 aa9.11□□□□□ -0.95
UBC-211ENST00000542416 SYNCQ9H7C4 482 aa9.11□□□□□ -0.95
UBC-211ENST00000542416 STARD5Q9NSY2 213 aa9.11□□□□□ -0.95
UBC-211ENST00000542416 WDR70Q9NW82 654 aa9.11□□□□□ -0.95
UBC-211ENST00000542416 ARHGEF38Q9NXL2 777 aa9.11□□□□□ -0.95
UBC-211ENST00000542416 DOLKQ9UPQ8 538 aa9.11□□□□□ -0.95
UBC-211ENST00000542416 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.11□□□□□ -0.95
UBC-211ENST00000542416 WASF2Q9Y6W5 498 aa9.11□□□□□ -0.95
UBC-211ENST00000542416 IGLV3-10A0A075B6K4 115 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 A0A0D9SEW6 157 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 IGLON5A6NGN9 336 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 TMEM110-MUSTN1A8MSY1 372 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 TERTO14746 1132 aaKnown RBP9.1□□□□□ -0.95
UBC-211ENST00000542416 DAB1O75553 588 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 GRAP2O75791 330 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 CNTN5O94779 1100 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 FGFR1OPO95684 399 aaKnown RBP9.1□□□□□ -0.95
UBC-211ENST00000542416 AFPP02771 609 aaKnown RBP9.1□□□□□ -0.95
UBC-211ENST00000542416 JMJD7P0C870 316 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 SLC5A2P31639 672 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 KRT9P35527 623 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 CXCR3P49682 368 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 IRAK1P51617 712 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 ADKP55263 362 aaKnown RBP9.1□□□□□ -0.95
UBC-211ENST00000542416 SLC6A3Q01959 620 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 PPARDQ03181 441 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 PTK2Q05397 1052 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 EIF2B5Q13144 721 aaKnown RBP9.1□□□□□ -0.95
UBC-211ENST00000542416 POLD3Q15054 466 aaPredicted RBP9.1□□□□□ -0.95
UBC-211ENST00000542416 ALFQ53S48 1182 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 ZNF805Q5CZA5 627 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 PERM1Q5SV97 790 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 FAXCQ5TGI0 409 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 OLFML1Q6UWY5 402 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 LINGO4Q6UY18 593 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 JAMLQ86YT9 394 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 TRIM59Q8IWR1 403 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 SLC35F3Q8IY50 421 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 PHACTR4Q8IZ21 702 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 ARL10Q8N8L6 244 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 EXD3Q8N9H8 876 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 PGAP3Q96FM1 320 aaPredicted RBP9.1□□□□□ -0.95
UBC-211ENST00000542416 GFM1Q96RP9 751 aaKnown RBP9.1□□□□□ -0.95
UBC-211ENST00000542416 SPON2Q9BUD6 331 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 OSBPL1AQ9BXW6 950 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 INTS2Q9H0H0 1204 aaKnown RBP9.1□□□□□ -0.95
UBC-211ENST00000542416 SYNDIG1Q9H7V2 258 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 KLF15Q9UIH9 416 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 PCDHGC3Q9UN70 934 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 PCDHB11Q9Y5F2 797 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 AHCTF1Q8WYP5 2266 aa9.1□□□□□ -0.95
UBC-211ENST00000542416 C16orf96A6NNT2 1141 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 PYCARD-AS1I3L0S3 204 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 RAD51BO15315 384 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 YY2O15391 372 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 SPINT1O43278 529 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 EFSO43281 561 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 SUV39H1O43463 412 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 PPFIA2O75334 1257 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 ZNF821O75541 412 aaPredicted RBP9.09□□□□□ -0.95
UBC-211ENST00000542416 GCATO75600 419 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 ENDOD1O94919 500 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 POP4O95707 220 aaKnown RBP9.09□□□□□ -0.95
UBC-211ENST00000542416 LIPCP11150 499 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 CD82P27701 267 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 HTR1BP28222 390 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 CCKBRP32239 447 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 UGT1A5P35504 534 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 SCNN1AP37088 669 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 USP8P40818 1118 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 PEX5P50542 639 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms