RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 HECTD3Q5T447 861 aa10.85□□□□□ -0.67
GABRB3-204ENST00000541819 RASAL3Q86YV0 1011 aa10.85□□□□□ -0.67
GABRB3-204ENST00000541819 RNF208Q9H0X6 261 aa10.85□□□□□ -0.67
GABRB3-204ENST00000541819 CRISPLD1Q9H336 500 aa10.85□□□□□ -0.67
GABRB3-204ENST00000541819 PCDHGA3Q9Y5H0 932 aa10.85□□□□□ -0.67
GABRB3-204ENST00000541819 CCDC162PA2VCL2 907 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 LDOC1O95751 146 aaPredicted RBP10.84□□□□□ -0.67
GABRB3-204ENST00000541819 MLYCDO95822 493 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 RPL14P50914 215 aaKnown RBP10.84□□□□□ -0.67
GABRB3-204ENST00000541819 HERVK_113P62684 666 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 HSPA14Q0VDF9 509 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 PCID2Q5JVF3 399 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 CES3Q6UWW8 571 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 TCP10LQ8TDR4 215 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 AP3S1Q92572 193 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 MGAT4AQ9UM21 535 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 ERGIC3Q9Y282 383 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.84□□□□□ -0.67
GABRB3-204ENST00000541819 TSPOAP1O95153 1857 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 TRDMT1O14717 391 aaKnown RBP10.84□□□□□ -0.67
GABRB3-204ENST00000541819 RIPK2O43353 540 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 TBL1XO60907 577 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 SLC35G4P0C7Q5 338 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 ACAP1Q15027 740 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 PARP6Q2NL67 630 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 LSM12Q3MHD2 195 aaKnown RBP10.84□□□□□ -0.67
GABRB3-204ENST00000541819 PARGQ86W56 976 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 PPP3R2Q96LZ3 170 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 CDRT15Q96T59 188 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 TRIM39Q9HCM9 518 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 TMX2Q9Y320 296 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 CACNB4O00305 520 aaPredicted RBP10.84□□□□□ -0.67
GABRB3-204ENST00000541819 CSDE1O75534 798 aaKnown RBP10.84□□□□□ -0.67
GABRB3-204ENST00000541819 NTRK1P04629 796 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 VIL1P09327 827 aaKnown RBP10.84□□□□□ -0.67
GABRB3-204ENST00000541819 ALADP13716 330 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 FDPSP14324 419 aaKnown RBP10.84□□□□□ -0.67
GABRB3-204ENST00000541819 TGFB2P61812 414 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 SQLEQ14534 574 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 TAF5Q15542 800 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 XKR6Q5GH73 641 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 KYAT3Q6YP21 454 aaKnown RBP10.84□□□□□ -0.67
GABRB3-204ENST00000541819 HIPK1Q86Z02 1210 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 PHF10Q8WUB8 498 aaKnown RBP10.84□□□□□ -0.67
GABRB3-204ENST00000541819 CORO1BQ9BR76 489 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 ALG9Q9H6U8 611 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 NRDE2Q9H7Z3 1164 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 PCDH12Q9NPG4 1184 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.84□□□□□ -0.67
GABRB3-204ENST00000541819 GMPPBQ9Y5P6 360 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 A0A0X1KG70 313 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 BTN3A3O00478 584 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 ATP6V1G2O95670 118 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 VEGFAP15692 232 aaPredicted RBP10.84□□□□□ -0.67
GABRB3-204ENST00000541819 TCF4P15884 667 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 ZNF37AP17032 561 aaPredicted RBP10.84□□□□□ -0.67
GABRB3-204ENST00000541819 ATP5F1P24539 256 aaPredicted RBP10.84□□□□□ -0.67
GABRB3-204ENST00000541819 CYP2C18P33260 490 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 MAPK10P53779 464 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 TNK2Q07912 1038 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 DGCR6Q14129 220 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 KAT5Q92993 513 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 RAD51AP1Q96B01 352 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 ZNF607Q96SK3 696 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 OSGEPQ9NPF4 335 aa10.84□□□□□ -0.67
GABRB3-204ENST00000541819 PSMD11O00231 422 aa10.83□□□□□ -0.67
GABRB3-204ENST00000541819 SERPINB7O75635 380 aa10.83□□□□□ -0.67
GABRB3-204ENST00000541819 FARP2O94887 1054 aaPredicted RBP10.83□□□□□ -0.67
GABRB3-204ENST00000541819 UBOX5O94941 541 aa10.83□□□□□ -0.67
GABRB3-204ENST00000541819 OR5F1O95221 314 aa10.83□□□□□ -0.67
GABRB3-204ENST00000541819 TFPIP10646 304 aa10.83□□□□□ -0.67
GABRB3-204ENST00000541819 CHKAP35790 457 aa10.83□□□□□ -0.67
GABRB3-204ENST00000541819 TTPAP49638 278 aa10.83□□□□□ -0.67
GABRB3-204ENST00000541819 PLK1P53350 603 aa10.83□□□□□ -0.67
GABRB3-204ENST00000541819 USP46P62068 366 aa10.83□□□□□ -0.67
GABRB3-204ENST00000541819 SPIBQ01892 262 aa10.83□□□□□ -0.67
GABRB3-204ENST00000541819 PFKFB4Q16877 469 aa10.83□□□□□ -0.67
GABRB3-204ENST00000541819 GALNT18Q6P9A2 607 aa10.83□□□□□ -0.67
GABRB3-204ENST00000541819 JAZF1Q86VZ6 243 aa10.83□□□□□ -0.67
GABRB3-204ENST00000541819 PEX5LQ8IYB4 626 aa10.83□□□□□ -0.67
GABRB3-204ENST00000541819 BHLHE22Q8NFJ8 381 aaPredicted RBP10.83□□□□□ -0.67
GABRB3-204ENST00000541819 KBTBD8Q8NFY9 601 aa10.83□□□□□ -0.67
GABRB3-204ENST00000541819 SYTL5Q8TDW5 730 aaPredicted RBP10.83□□□□□ -0.67
GABRB3-204ENST00000541819 VCPIP1Q96JH7 1222 aa10.83□□□□□ -0.67
GABRB3-204ENST00000541819 PDLIM2Q96JY6 352 aa10.83□□□□□ -0.67
GABRB3-204ENST00000541819 PRMT6Q96LA8 375 aaPredicted RBP10.83□□□□□ -0.67
GABRB3-204ENST00000541819 TRNT1Q96Q11 434 aaKnown RBP10.83□□□□□ -0.67
GABRB3-204ENST00000541819 ABHD16BQ9H3Z7 469 aa10.83□□□□□ -0.67
GABRB3-204ENST00000541819 EPB41L1Q9H4G0 881 aa10.83□□□□□ -0.67
GABRB3-204ENST00000541819 SPATA31A1Q5TZJ5 1347 aa10.83□□□□□ -0.68
GABRB3-204ENST00000541819 ADORA2AP29274 412 aa10.83□□□□□ -0.68
GABRB3-204ENST00000541819 ERVK-24P63145 666 aa10.83□□□□□ -0.68
GABRB3-204ENST00000541819 PPIDQ08752 370 aaKnown RBP10.83□□□□□ -0.68
GABRB3-204ENST00000541819 SV2AQ7L0J3 742 aa10.83□□□□□ -0.68
GABRB3-204ENST00000541819 SCUBE3Q8IX30 993 aa10.83□□□□□ -0.68
GABRB3-204ENST00000541819 CERKQ8TCT0 537 aa10.83□□□□□ -0.68
GABRB3-204ENST00000541819 MAGEE2Q8TD90 523 aaPredicted RBP10.83□□□□□ -0.68
GABRB3-204ENST00000541819 FNIP1Q8TF40 1166 aa10.83□□□□□ -0.68
GABRB3-204ENST00000541819 IL22Q9GZX6 179 aa10.83□□□□□ -0.68
GABRB3-204ENST00000541819 ING4Q9UNL4 249 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms