RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 SIN3BO75182 1162 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 TCEA3O75764 348 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 ADRB2P07550 413 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 UMPSP11172 480 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 YBX3P16989 372 aaKnown RBP eCLIP15.11■□□□□ 0.015e-7■□□□□ 11.3
SMARCA4-207ENST00000541122 IL2P60568 153 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 MTX3Q5HYI7 312 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 OFCC1Q8IZS5 231 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 TCAIMQ8N3R3 496 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 DNAJB14Q8TBM8 379 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 CCDC59Q9P031 241 aaKnown RBP15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 LTFP02788 710 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 SHMT1P34896 483 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 POLD2P49005 469 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 TAS2R40P59535 323 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 ARPC4P59998 168 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 ENPEPQ07075 957 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 DSELQ8IZU8 1212 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 DNERQ8NFT8 737 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 TNFRSF25Q93038 417 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 FBXO32Q969P5 355 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 NOL11Q9H8H0 719 aaKnown RBP15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 POPDC2Q9HBU9 364 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 FGF10O15520 208 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 SERPINA1P01009 418 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 RHOCP08134 193 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 IRF1P10914 325 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 TPSB2P20231 275 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 TPSAB1Q15661 275 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 PDCD4Q53EL6 469 aaKnown RBP15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 PMF1Q6P1K2 205 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 METTL7BQ6UX53 244 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 UNC93AQ86WB7 457 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 ZFYVE28Q9HCC9 887 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 SMPD3Q9NY59 655 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 TRPM5Q9NZQ8 1165 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 SLC22A2O15244 555 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 RAMP2O60895 175 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 CCNE2O96020 404 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 EGFRP00533 1210 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 C5orf22Q49AR2 442 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 PYDC2Q56P42 97 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 ZNF621Q6ZSS3 439 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 LINC00116Q8NCU8 138 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 CYP2W1Q8TAV3 490 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 KCTD4Q8WVF5 259 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 MAGEB10Q96LZ2 347 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 KLHL32Q96NJ5 620 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 CDK5RAP1Q96SZ6 601 aaKnown RBP15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 SEMA4BQ9NPR2 832 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 CATSPERZQ9NTU4 200 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 JCADQ9P266 1359 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 NOS2P35228 1153 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 GPR15P49685 360 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 SHROOM1Q2M3G4 852 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 GALNT18Q6P9A2 607 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 C4orf32Q8N8J7 132 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 C2orf69Q8N8R5 385 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 GRPEL2Q8TAA5 225 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 CXorf21Q9HAI6 301 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 KLHL1Q9NR64 748 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 SETD4Q9NVD3 440 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 HGFP14210 728 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 CCNB1P14635 433 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 IL1R1P14778 569 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 HIRAP54198 1017 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 RHOAP61586 193 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 PFKFB4Q16877 469 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 ATP13A4Q4VNC1 1196 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 C6orf52Q5T4I8 152 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 PAGE2Q7Z2X7 111 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 SATL1Q86VE3 508 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 SYT12Q8IV01 421 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 REXO5Q96IC2 774 aaKnown RBP15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 PANX3Q96QZ0 392 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 SNRNP25Q9BV90 132 aaKnown RBP15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 XPR1Q9UBH6 696 aa15.1■□□□□ 0.01
SMARCA4-207ENST00000541122 AZIN1O14977 448 aa15.09■□□□□ 0.01
SMARCA4-207ENST00000541122 HMGB3O15347 200 aaKnown RBP15.09■□□□□ 0.01
SMARCA4-207ENST00000541122 KCNQ2O43526 872 aa15.09■□□□□ 0.01
SMARCA4-207ENST00000541122 PSMD10O75832 226 aa15.09■□□□□ 0.01
SMARCA4-207ENST00000541122 TGFB3P10600 412 aa15.09■□□□□ 0.01
SMARCA4-207ENST00000541122 PTGIRP43119 386 aa15.09■□□□□ 0.01
SMARCA4-207ENST00000541122 SMIM11AP58511 58 aa15.09■□□□□ 0.01
SMARCA4-207ENST00000541122 SCUBE3Q8IX30 993 aa15.09■□□□□ 0.01
SMARCA4-207ENST00000541122 SERPINB11Q96P15 392 aa15.09■□□□□ 0.01
SMARCA4-207ENST00000541122 SYT15Q9BQS2 421 aa15.09■□□□□ 0.01
SMARCA4-207ENST00000541122 FAM126AQ9BYI3 521 aaPredicted RBP15.09■□□□□ 0.01
SMARCA4-207ENST00000541122 KLK14Q9P0G3 267 aa15.09■□□□□ 0.01
SMARCA4-207ENST00000541122 G3V2T6 193 aa15.09■□□□□ 0.01
SMARCA4-207ENST00000541122 PLK4O00444 970 aa15.09■□□□□ 0.01
SMARCA4-207ENST00000541122 PEX2P28328 305 aa15.09■□□□□ 0.01
SMARCA4-207ENST00000541122 RAB43Q86YS6 212 aa15.09■□□□□ 0.01
SMARCA4-207ENST00000541122 LRRC49Q8IUZ0 686 aa15.09■□□□□ 0.01
SMARCA4-207ENST00000541122 AHI1Q8N157 1196 aa15.09■□□□□ 0.01
SMARCA4-207ENST00000541122 HM13Q8TCT9 377 aa15.09■□□□□ 0.01
SMARCA4-207ENST00000541122 HELQQ8TDG4 1101 aa15.09■□□□□ 0.01
SMARCA4-207ENST00000541122 WNT8BQ93098 351 aa15.09■□□□□ 0.01
SMARCA4-207ENST00000541122 NARS2Q96I59 477 aaKnown RBP15.09■□□□□ 0.01
SMARCA4-207ENST00000541122 TRMT13Q9NUP7 481 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms