RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 CCDC187A0A096LP49 1063 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 ILVBLA1L0T0 632 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 CPED1A4D0V7 1026 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 GOLGA6L3A6NEY3 463 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 GOLGA6L22H0YM25 854 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 H3BM21 787 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 AREL1O15033 823 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 THAP12O43422 761 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 SLC28A2O43868 658 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 PCDH8O95206 1070 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 SMC2O95347 1197 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 PAK4O96013 591 aaPredicted RBP7.44□□□□□ -1.22
YBX3-209ENST00000540747 AFPP02771 609 aaKnown RBP7.44□□□□□ -1.22
YBX3-209ENST00000540747 RHOCP08134 193 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 KRT10P13645 584 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 KRT5P13647 590 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 JUNDP17535 347 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 ITGB6P18564 788 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 NOS2P35228 1153 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 CSRP3P50461 194 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 ARF5P84085 180 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 SLC6A3Q01959 620 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 CETN1Q12798 172 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 NME3Q13232 169 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 PDE1CQ14123 709 aaPredicted RBP7.44□□□□□ -1.22
YBX3-209ENST00000540747 NR0B2Q15466 257 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 DEFB133Q30KQ1 61 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 CCDC40Q4G0X9 1142 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 C6orf132Q5T0Z8 1188 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 GJB7Q6PEY0 223 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 TRIM65Q6PJ69 517 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 ZNF783Q6ZMS7 281 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 C11orf57Q6ZUT1 292 aaPredicted RBP7.44□□□□□ -1.22
YBX3-209ENST00000540747 B3GNT8Q7Z7M8 397 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 PLPP6Q8IY26 295 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 ELOA2Q8IYF1 753 aaPredicted RBP7.44□□□□□ -1.22
YBX3-209ENST00000540747 RBFAQ8N0V3 343 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 PCDH20Q8N6Y1 951 aaKnown RBP7.44□□□□□ -1.22
YBX3-209ENST00000540747 C1orf131Q8NDD1 294 aaKnown RBP7.44□□□□□ -1.22
YBX3-209ENST00000540747 OR7D4Q8NG98 312 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 WDR48Q8TAF3 677 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 NAT6Q93015 286 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 SMARCE1Q969G3 411 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 CENPTQ96BT3 561 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 CCDC34Q96HJ3 373 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 PPP1R16AQ96I34 528 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 FEM1CQ96JP0 617 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 C1orf74Q96LT6 269 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 TIGD1Q96MW7 591 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 CCNL2Q96S94 520 aaPredicted RBP7.44□□□□□ -1.22
YBX3-209ENST00000540747 LRRC61Q9BV99 259 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 CLPBQ9H078 707 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 ABCG4Q9H172 646 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 UBE2TQ9NPD8 197 aaPredicted RBP7.44□□□□□ -1.22
YBX3-209ENST00000540747 DYRK4Q9NR20 520 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 TMPRSS4Q9NRS4 437 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 RRN3Q9NYV6 651 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 COX16Q9P0S2 106 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 GGT7Q9UJ14 662 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 AJAP1Q9UKB5 411 aaPredicted RBP7.44□□□□□ -1.22
YBX3-209ENST00000540747 MAN1B1Q9UKM7 699 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 NEU3Q9UQ49 428 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 FARP1Q9Y4F1 1045 aaPredicted RBP7.44□□□□□ -1.22
YBX3-209ENST00000540747 DOCK4Q8N1I0 1966 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 IGLON5A6NGN9 336 aa7.43□□□□□ -1.22
YBX3-209ENST00000540747 D6RAR5 112 aa7.43□□□□□ -1.22
YBX3-209ENST00000540747 M0QYT0 321 aa7.43□□□□□ -1.22
YBX3-209ENST00000540747 FPGTO14772 594 aa7.43□□□□□ -1.22
YBX3-209ENST00000540747 TSPAN6O43657 245 aa7.43□□□□□ -1.22
YBX3-209ENST00000540747 TNFSF15O95150 251 aa7.43□□□□□ -1.22
YBX3-209ENST00000540747 CELA2BP08218 269 aaPredicted RBP7.43□□□□□ -1.22
YBX3-209ENST00000540747 CDH5P33151 784 aaPredicted RBP7.43□□□□□ -1.22
YBX3-209ENST00000540747 IGFALSP35858 605 aa7.43□□□□□ -1.22
YBX3-209ENST00000540747 SCNN1AP37088 669 aa7.43□□□□□ -1.22
YBX3-209ENST00000540747 PPP1R2P41236 205 aa7.43□□□□□ -1.22
YBX3-209ENST00000540747 CCNHP51946 323 aaPredicted RBP7.43□□□□□ -1.22
YBX3-209ENST00000540747 APBA1Q02410 837 aa7.43□□□□□ -1.22
YBX3-209ENST00000540747 SLC20A2Q08357 652 aa7.43□□□□□ -1.22
YBX3-209ENST00000540747 SRSF6Q13247 344 aaKnown RBP7.43□□□□□ -1.22
YBX3-209ENST00000540747 MAPK8IP2Q13387 824 aaPredicted RBP7.43□□□□□ -1.22
YBX3-209ENST00000540747 MORC3Q14149 939 aa7.43□□□□□ -1.22
YBX3-209ENST00000540747 CARD16Q5EG05 197 aa7.43□□□□□ -1.22
YBX3-209ENST00000540747 ACBD5Q5T8D3 534 aaPredicted RBP7.43□□□□□ -1.22
YBX3-209ENST00000540747 MANEALQ5VSG8 457 aa7.43□□□□□ -1.22
YBX3-209ENST00000540747 TRNP1Q6NT89 227 aa7.43□□□□□ -1.22
YBX3-209ENST00000540747 DPY19L2P1Q6NXN4 242 aa7.43□□□□□ -1.22
YBX3-209ENST00000540747 CRTC1Q6UUV9 634 aa7.43□□□□□ -1.22
YBX3-209ENST00000540747 XKR5Q6UX68 686 aa7.43□□□□□ -1.22
YBX3-209ENST00000540747 CCDC81Q6ZN84 652 aa7.43□□□□□ -1.22
YBX3-209ENST00000540747 TFAP2DQ7Z6R9 452 aa7.43□□□□□ -1.22
YBX3-209ENST00000540747 PASD1Q8IV76 773 aa7.43□□□□□ -1.22
YBX3-209ENST00000540747 PHACTR4Q8IZ21 702 aa7.43□□□□□ -1.22
YBX3-209ENST00000540747 ARL14Q8N4G2 192 aa7.43□□□□□ -1.22
YBX3-209ENST00000540747 LMX1AQ8TE12 382 aa7.43□□□□□ -1.22
YBX3-209ENST00000540747 NELFBQ8WX92 580 aa7.43□□□□□ -1.22
YBX3-209ENST00000540747 RNF34Q969K3 372 aa7.43□□□□□ -1.22
YBX3-209ENST00000540747 RAB7BQ96AH8 199 aa7.43□□□□□ -1.22
YBX3-209ENST00000540747 ISG20Q96AZ6 181 aaKnown RBP7.43□□□□□ -1.22
YBX3-209ENST00000540747 CCDC3Q9BQI4 270 aa7.43□□□□□ -1.22
YBX3-209ENST00000540747 HEPHQ9BQS7 1158 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms