RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 HTRA1Q92743 480 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 PMEPA1Q969W9 287 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 TMEM117Q9H0C3 514 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 CPNE5Q9HCH3 593 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 PDGFCQ9NRA1 345 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 SMOXQ9NWM0 555 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 UBA2Q9UBT2 640 aaPredicted RBP9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 GJD2Q9UKL4 321 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 SNX13Q9Y5W8 968 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 LCTP09848 1927 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 ZNFX1Q9P2E3 1918 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 ASB14A6NK59 587 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 A8MX80 341 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 E7ESA3 106 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 ERVH48-1M5A8F1 160 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 RNF103O00237 685 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 SOCS2O14508 198 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 IL18RAPO95256 599 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 ARIH2O95376 493 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 CAPN1P07384 714 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 WEE2P0C1S8 567 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 CKMT2P17540 419 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 CYP2B6P20813 491 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 PTGS2P35354 604 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 SLC1A6P48664 564 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 TAS2R40P59535 323 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 PSMC6P62333 389 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 CAP1Q01518 475 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 PTP4A2Q12974 167 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 MAP2K5Q13163 448 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 LY6KQ17RY6 165 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 C6orf10Q5SRN2 563 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 CHST15Q7LFX5 561 aaPredicted RBP9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 SNX32Q86XE0 403 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 IGDCC3Q8IVU1 814 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 TPH2Q8IWU9 490 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 BPIFB6Q8NFQ5 453 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 KAT5Q92993 513 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 SDCCAG3Q96C92 435 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 EFHD1Q9BUP0 239 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 NDFIP2Q9NV92 336 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 RNF186Q9NXI6 227 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 EIF3LQ9Y262 564 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 DOCK3Q8IZD9 2030 aa9.59□□□□□ -0.87
CTNNA1-243ENST00000540387 STX16-NPEPL1H3BU86 382 aa9.59□□□□□ -0.88
CTNNA1-243ENST00000540387 ZNF195O14628 629 aa9.59□□□□□ -0.88
CTNNA1-243ENST00000540387 ZBTB39O15060 712 aa9.59□□□□□ -0.88
CTNNA1-243ENST00000540387 KCNJ13O60928 360 aa9.59□□□□□ -0.88
CTNNA1-243ENST00000540387 GPC4O75487 556 aa9.59□□□□□ -0.88
CTNNA1-243ENST00000540387 ALDH1A2O94788 518 aa9.59□□□□□ -0.88
CTNNA1-243ENST00000540387 MFN2O95140 757 aa9.59□□□□□ -0.88
CTNNA1-243ENST00000540387 SNAI1O95863 264 aaPredicted RBP9.59□□□□□ -0.88
CTNNA1-243ENST00000540387 MYCP01106 439 aaPredicted RBP9.59□□□□□ -0.88
CTNNA1-243ENST00000540387 KRT8P05787 483 aa9.59□□□□□ -0.88
CTNNA1-243ENST00000540387 TCN1P20061 433 aaPredicted RBP9.59□□□□□ -0.88
CTNNA1-243ENST00000540387 GARTP22102 1010 aa9.59□□□□□ -0.88
CTNNA1-243ENST00000540387 PKLRP30613 574 aa9.59□□□□□ -0.88
CTNNA1-243ENST00000540387 DPP6P42658 865 aa9.59□□□□□ -0.88
CTNNA1-243ENST00000540387 UNC5AQ6ZN44 842 aa9.59□□□□□ -0.88
CTNNA1-243ENST00000540387 GALNT7Q86SF2 657 aa9.59□□□□□ -0.88
CTNNA1-243ENST00000540387 SLC4A11Q8NBS3 891 aa9.59□□□□□ -0.88
CTNNA1-243ENST00000540387 FAM156AQ8NDB6 213 aa9.59□□□□□ -0.88
CTNNA1-243ENST00000540387 S100ZQ8WXG8 99 aa9.59□□□□□ -0.88
CTNNA1-243ENST00000540387 CPT1BQ92523 772 aa9.59□□□□□ -0.88
CTNNA1-243ENST00000540387 SNX19Q92543 992 aa9.59□□□□□ -0.88
CTNNA1-243ENST00000540387 VCPIP1Q96JH7 1222 aa9.59□□□□□ -0.88
CTNNA1-243ENST00000540387 NOL11Q9H8H0 719 aaKnown RBP9.59□□□□□ -0.88
CTNNA1-243ENST00000540387 PCDH9Q9HC56 1237 aa9.59□□□□□ -0.88
CTNNA1-243ENST00000540387 WRAP73Q9P2S5 460 aaPredicted RBP9.59□□□□□ -0.88
CTNNA1-243ENST00000540387 RWDD3Q9Y3V2 267 aa9.59□□□□□ -0.88
CTNNA1-243ENST00000540387 RBBP6Q7Z6E9 1792 aaKnown RBP9.58□□□□□ -0.88
CTNNA1-243ENST00000540387 FADS2P1A8MWK0 482 aa9.58□□□□□ -0.88
CTNNA1-243ENST00000540387 SGK1O00141 431 aa9.58□□□□□ -0.88
CTNNA1-243ENST00000540387 RFPL1O75677 317 aa9.58□□□□□ -0.88
CTNNA1-243ENST00000540387 SEC14L2O76054 403 aa9.58□□□□□ -0.88
CTNNA1-243ENST00000540387 ARHGEF15O94989 841 aa9.58□□□□□ -0.88
CTNNA1-243ENST00000540387 CPNE6O95741 557 aa9.58□□□□□ -0.88
CTNNA1-243ENST00000540387 SNRPAP09012 282 aaKnown RBP9.58□□□□□ -0.88
CTNNA1-243ENST00000540387 UBA1P22314 1058 aaKnown RBP9.58□□□□□ -0.88
CTNNA1-243ENST00000540387 SERPINB5P36952 375 aa9.58□□□□□ -0.88
CTNNA1-243ENST00000540387 POLR2IP36954 125 aaKnown RBP9.58□□□□□ -0.88
CTNNA1-243ENST00000540387 B2MP61769 119 aa9.58□□□□□ -0.88
CTNNA1-243ENST00000540387 FCHO2Q0JRZ9 810 aa9.58□□□□□ -0.88
CTNNA1-243ENST00000540387 SLC10A2Q12908 348 aaPredicted RBP9.58□□□□□ -0.88
CTNNA1-243ENST00000540387 SLC13A2Q13183 592 aa9.58□□□□□ -0.88
CTNNA1-243ENST00000540387 POU6F1Q14863 301 aa9.58□□□□□ -0.88
CTNNA1-243ENST00000540387 CDK10Q15131 360 aa9.58□□□□□ -0.88
CTNNA1-243ENST00000540387 FASTKD1Q53R41 847 aaKnown RBP9.58□□□□□ -0.88
CTNNA1-243ENST00000540387 AGAP9Q5VTM2 703 aa9.58□□□□□ -0.88
CTNNA1-243ENST00000540387 HMBOX1Q6NT76 420 aa9.58□□□□□ -0.88
CTNNA1-243ENST00000540387 DRICH1Q6PGQ1 229 aaPredicted RBP9.58□□□□□ -0.88
CTNNA1-243ENST00000540387 ATG14Q6ZNE5 492 aa9.58□□□□□ -0.88
CTNNA1-243ENST00000540387 CHSY3Q70JA7 882 aa9.58□□□□□ -0.88
CTNNA1-243ENST00000540387 FKBP9P1Q75LS8 142 aa9.58□□□□□ -0.88
CTNNA1-243ENST00000540387 TRMT1LQ7Z2T5 733 aaKnown RBP9.58□□□□□ -0.88
CTNNA1-243ENST00000540387 PPIL6Q8IXY8 311 aa9.58□□□□□ -0.88
CTNNA1-243ENST00000540387 ZCCHC7Q8N3Z6 543 aaKnown RBP9.58□□□□□ -0.88
CTNNA1-243ENST00000540387 MFSD4AQ8N468 514 aa9.58□□□□□ -0.88
CTNNA1-243ENST00000540387 TAB3Q8N5C8 712 aaPredicted RBP9.58□□□□□ -0.88
CTNNA1-243ENST00000540387 SNX31Q8N9S9 440 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms