RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 PCDHGA7Q9Y5G6 932 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 CEP350Q5VT06 3117 aa9.79□□□□□ -0.84
CDH13-204ENST00000539548 CCDC160A6NGH7 325 aa9.79□□□□□ -0.84
CDH13-204ENST00000539548 I6L893 689 aaPredicted RBP9.79□□□□□ -0.84
CDH13-204ENST00000539548 XPOTO43592 962 aaKnown RBP9.79□□□□□ -0.84
CDH13-204ENST00000539548 CACNG3O60359 315 aa9.79□□□□□ -0.84
CDH13-204ENST00000539548 PSMC3P17980 439 aa9.79□□□□□ -0.84
CDH13-204ENST00000539548 PTPN1P18031 435 aaKnown RBP9.79□□□□□ -0.84
CDH13-204ENST00000539548 SAT1P21673 171 aa9.79□□□□□ -0.84
CDH13-204ENST00000539548 ZNF135P52742 658 aaPredicted RBP9.79□□□□□ -0.84
CDH13-204ENST00000539548 INHBCP55103 352 aa9.79□□□□□ -0.84
CDH13-204ENST00000539548 RAB10P61026 200 aa9.79□□□□□ -0.84
CDH13-204ENST00000539548 CDC42EP1Q00587 391 aa9.79□□□□□ -0.84
CDH13-204ENST00000539548 TRAP1Q12931 704 aaKnown RBP9.79□□□□□ -0.84
CDH13-204ENST00000539548 STX5Q13190 355 aa9.79□□□□□ -0.84
CDH13-204ENST00000539548 PCID2Q5JVF3 399 aa9.79□□□□□ -0.84
CDH13-204ENST00000539548 TSTD2Q5T7W7 516 aa9.79□□□□□ -0.84
CDH13-204ENST00000539548 PKN3Q6P5Z2 889 aa9.79□□□□□ -0.84
CDH13-204ENST00000539548 SLC41A1Q8IVJ1 513 aa9.79□□□□□ -0.84
CDH13-204ENST00000539548 CHERPQ8IWX8 916 aaKnown RBP9.79□□□□□ -0.84
CDH13-204ENST00000539548 TOP6BLQ8N6T0 577 aa9.79□□□□□ -0.84
CDH13-204ENST00000539548 NXNL1Q96CM4 212 aa9.79□□□□□ -0.84
CDH13-204ENST00000539548 TMA16Q96EY4 203 aaKnown RBP9.79□□□□□ -0.84
CDH13-204ENST00000539548 DUS3LQ96G46 650 aaKnown RBP9.79□□□□□ -0.84
CDH13-204ENST00000539548 MARK4Q96L34 752 aa9.79□□□□□ -0.84
CDH13-204ENST00000539548 ZNF597Q96LX8 424 aa9.79□□□□□ -0.84
CDH13-204ENST00000539548 UNC93B1Q9H1C4 597 aa9.79□□□□□ -0.84
CDH13-204ENST00000539548 NXF3Q9H4D5 531 aaKnown RBP9.79□□□□□ -0.84
CDH13-204ENST00000539548 RNF19AQ9NV58 838 aa9.79□□□□□ -0.84
CDH13-204ENST00000539548 HACD3Q9P035 362 aa9.79□□□□□ -0.84
CDH13-204ENST00000539548 XPR1Q9UBH6 696 aa9.79□□□□□ -0.84
CDH13-204ENST00000539548 SARDHQ9UL12 918 aa9.79□□□□□ -0.84
CDH13-204ENST00000539548 AP4S1Q9Y587 144 aa9.79□□□□□ -0.84
CDH13-204ENST00000539548 NRCAMQ92823 1304 aa9.79□□□□□ -0.84
CDH13-204ENST00000539548 CLDN5O00501 218 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 NRP1O14786 923 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 PGK1P00558 417 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 JCHAINP01591 159 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 FAM163BP0C2L3 166 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 KCNE1P15382 129 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 AVPR1AP37288 418 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 TKTL1P51854 596 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 CCNA1P78396 465 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 RHDQ02161 417 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 PCBP1Q15365 356 aaKnown RBP eCLIP9.78□□□□□ -0.84
CDH13-204ENST00000539548 MAPRE2Q15555 327 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 ARL13BQ3SXY8 428 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 XKR4Q5GH76 650 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 CLEC20AQ6ZU45 233 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 PIWIL4Q7Z3Z4 852 aaKnown RBP9.78□□□□□ -0.84
CDH13-204ENST00000539548 CCNYL1Q8N7R7 359 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 EME1Q96AY2 570 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 PGAP3Q96FM1 320 aaPredicted RBP9.78□□□□□ -0.84
CDH13-204ENST00000539548 OTUD5Q96G74 571 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 FAR2Q96K12 515 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 TSGA13Q96PP4 275 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 MRPL57Q9BQC6 102 aaKnown RBP9.78□□□□□ -0.84
CDH13-204ENST00000539548 HAUS8Q9BT25 410 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 MRPL46Q9H2W6 279 aaKnown RBP9.78□□□□□ -0.84
CDH13-204ENST00000539548 SUDS3Q9H7L9 328 aaPredicted RBP9.78□□□□□ -0.84
CDH13-204ENST00000539548 ELP3Q9H9T3 547 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 VTA1Q9NP79 307 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 ADA2Q9NZK5 511 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 CIDEBQ9UHD4 219 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 RNF11Q9Y3C5 154 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 CEPT1Q9Y6K0 416 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 TANC1Q9C0D5 1861 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 A0A087X1B8 175 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 FAM95CA0A1B0GW59 222 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 C7orf72A4D263 438 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 KCNU1A8MYU2 1149 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 H3BSA7 217 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 TRIM24O15164 1050 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 GPR32O75388 356 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 STMN1P16949 149 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 YBX3P16989 372 aaKnown RBP eCLIP9.78□□□□□ -0.84
CDH13-204ENST00000539548 AKAP5P24588 427 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 RANBP1P43487 201 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 PGGT1BP53609 377 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 DAOAP59103 153 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 LILRA4P59901 499 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 USP46P62068 366 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 HPCAP84074 193 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 ZNF33AQ06730 810 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 LRP8Q14114 963 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 IKBKEQ14164 716 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 GPR162Q16538 588 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 KLC3Q6P597 504 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 ISLR2Q6UXK2 745 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 GK5Q6ZS86 529 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 ERO1BQ86YB8 467 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 CEP97Q8IW35 865 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 FAM156AQ8NDB6 213 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 SHCBP1Q8NEM2 672 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 TSPAN14Q8NG11 270 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 SPPL2BQ8TCT7 592 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 LZICQ8WZA0 190 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 ATP6V1E2Q96A05 226 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 DNAJC1Q96KC8 554 aaKnown RBP9.78□□□□□ -0.84
CDH13-204ENST00000539548 UHRF1Q96T88 793 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms