RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 PAK5Q9P286 719 aa17.5■□□□□ 0.39
CLN6-202ENST00000538696 SLCO3A1Q9UIG8 710 aa17.5■□□□□ 0.39
CLN6-202ENST00000538696 FCF1Q9Y324 198 aaKnown RBP17.5■□□□□ 0.39
CLN6-202ENST00000538696 FARP1Q9Y4F1 1045 aaPredicted RBP17.5■□□□□ 0.39
CLN6-202ENST00000538696 TMEM221A6NGB7 291 aa17.49■□□□□ 0.39
CLN6-202ENST00000538696 M0R296 226 aa17.49■□□□□ 0.39
CLN6-202ENST00000538696 RNF103O00237 685 aa17.49■□□□□ 0.39
CLN6-202ENST00000538696 ATP8B1O43520 1251 aa17.49■□□□□ 0.39
CLN6-202ENST00000538696 SMAD6O43541 496 aaKnown RBP17.49■□□□□ 0.39
CLN6-202ENST00000538696 PPFIA2O75334 1257 aa17.49■□□□□ 0.39
CLN6-202ENST00000538696 TMCC1O94876 653 aa17.49■□□□□ 0.39
CLN6-202ENST00000538696 PRKCHP24723 683 aa17.49■□□□□ 0.39
CLN6-202ENST00000538696 GEMIN4P57678 1058 aaKnown RBP17.49■□□□□ 0.39
CLN6-202ENST00000538696 MRPS21P82921 87 aaKnown RBP17.49■□□□□ 0.39
CLN6-202ENST00000538696 ZNF33AQ06730 810 aa17.49■□□□□ 0.39
CLN6-202ENST00000538696 DHX9Q08211 1270 aaKnown RBP17.49■□□□□ 0.39
CLN6-202ENST00000538696 ENPP2Q13822 863 aa17.49■□□□□ 0.39
CLN6-202ENST00000538696 C2orf27AQ580R0 203 aa17.49■□□□□ 0.39
CLN6-202ENST00000538696 TMCO4Q5TGY1 634 aa17.49■□□□□ 0.39
CLN6-202ENST00000538696 ANKRD22Q5VYY1 191 aa17.49■□□□□ 0.39
CLN6-202ENST00000538696 C22orf39Q6P5X5 142 aa17.49■□□□□ 0.39
CLN6-202ENST00000538696 PKN3Q6P5Z2 889 aa17.49■□□□□ 0.39
CLN6-202ENST00000538696 FLCNQ8NFG4 579 aa17.49■□□□□ 0.39
CLN6-202ENST00000538696 CPT1BQ92523 772 aa17.49■□□□□ 0.39
CLN6-202ENST00000538696 PRCCQ92733 491 aaPredicted RBP17.49■□□□□ 0.39
CLN6-202ENST00000538696 FATE1Q969F0 183 aa17.49■□□□□ 0.39
CLN6-202ENST00000538696 ZNF419Q96HQ0 510 aaPredicted RBP17.49■□□□□ 0.39
CLN6-202ENST00000538696 ZNF599Q96NL3 588 aa17.49■□□□□ 0.39
CLN6-202ENST00000538696 NELL2Q99435 816 aa17.49■□□□□ 0.39
CLN6-202ENST00000538696 OSBPL6Q9BZF3 934 aa17.49■□□□□ 0.39
CLN6-202ENST00000538696 LMAN1LQ9HAT1 526 aa17.49■□□□□ 0.39
CLN6-202ENST00000538696 CACNA2D2Q9NY47 1150 aa17.49■□□□□ 0.39
CLN6-202ENST00000538696 SEPT10Q9P0V9 454 aa17.49■□□□□ 0.39
CLN6-202ENST00000538696 VCANP13611 3396 aa17.49■□□□□ 0.39
CLN6-202ENST00000538696 C5orf60A6NFR6 353 aa17.48■□□□□ 0.39
CLN6-202ENST00000538696 TTC34A8MYJ7 566 aa17.48■□□□□ 0.39
CLN6-202ENST00000538696 MATN3O15232 486 aa17.48■□□□□ 0.39
CLN6-202ENST00000538696 ATP9BO43861 1147 aa17.48■□□□□ 0.39
CLN6-202ENST00000538696 GCATO75600 419 aa17.48■□□□□ 0.39
CLN6-202ENST00000538696 KLF8O95600 359 aaPredicted RBP17.48■□□□□ 0.39
CLN6-202ENST00000538696 WASP42768 502 aa17.48■□□□□ 0.39
CLN6-202ENST00000538696 ST8SIA6P61647 398 aa17.48■□□□□ 0.39
CLN6-202ENST00000538696 BASP1P80723 227 aaKnown RBP17.48■□□□□ 0.39
CLN6-202ENST00000538696 SLC20A2Q08357 652 aa17.48■□□□□ 0.39
CLN6-202ENST00000538696 SLC10A7Q0GE19 358 aa17.48■□□□□ 0.39
CLN6-202ENST00000538696 WASHC5Q12768 1159 aa17.48■□□□□ 0.39
CLN6-202ENST00000538696 LBRQ14739 615 aaKnown RBP17.48■□□□□ 0.39
CLN6-202ENST00000538696 MORF4L2Q15014 288 aa17.48■□□□□ 0.39
CLN6-202ENST00000538696 CYTH1Q15438 398 aa17.48■□□□□ 0.39
CLN6-202ENST00000538696 UAP1Q16222 522 aaPredicted RBP17.48■□□□□ 0.39
CLN6-202ENST00000538696 INO80DQ53TQ3 878 aaPredicted RBP17.48■□□□□ 0.39
CLN6-202ENST00000538696 FAXCQ5TGI0 409 aa17.48■□□□□ 0.39
CLN6-202ENST00000538696 SYNPOQ8N3V7 929 aa17.48■□□□□ 0.39
CLN6-202ENST00000538696 ZNF366Q8N895 744 aa17.48■□□□□ 0.39
CLN6-202ENST00000538696 IL17RCQ8NAC3 791 aa17.48■□□□□ 0.39
CLN6-202ENST00000538696 ATP11CQ8NB49 1132 aa17.48■□□□□ 0.39
CLN6-202ENST00000538696 KDM1BQ8NB78 822 aa17.48■□□□□ 0.39
CLN6-202ENST00000538696 RPLP0P6Q8NHW5 317 aa17.48■□□□□ 0.39
CLN6-202ENST00000538696 KCNV2Q8TDN2 545 aa17.48■□□□□ 0.39
CLN6-202ENST00000538696 FRS2Q8WU20 508 aa17.48■□□□□ 0.39
CLN6-202ENST00000538696 SPATA13Q96N96 652 aa17.48■□□□□ 0.39
CLN6-202ENST00000538696 CEP41Q9BYV8 373 aa17.48■□□□□ 0.39
CLN6-202ENST00000538696 TMEM245Q9H330 911 aa17.48■□□□□ 0.39
CLN6-202ENST00000538696 MFSD1Q9H3U5 465 aa17.48■□□□□ 0.39
CLN6-202ENST00000538696 MTG2Q9H4K7 406 aa17.48■□□□□ 0.39
CLN6-202ENST00000538696 PLA2G4CQ9UP65 541 aa17.48■□□□□ 0.39
CLN6-202ENST00000538696 SHOC2Q9UQ13 582 aa17.48■□□□□ 0.39
CLN6-202ENST00000538696 STON1Q9Y6Q2 735 aa17.48■□□□□ 0.39
CLN6-202ENST00000538696 BDP1A6H8Y1 2624 aa17.48■□□□□ 0.39
CLN6-202ENST00000538696 TCRBV7S3A2A0A539 114 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 WASH3PC4AMC7 463 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 KCNK1O00180 336 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 STK25O00506 426 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 ZNF821O75541 412 aaPredicted RBP17.47■□□□□ 0.39
CLN6-202ENST00000538696 TMEM63AO94886 807 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 HLA-EP13747 358 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 ACTN2P35609 894 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 IFI35P80217 286 aaPredicted RBP17.47■□□□□ 0.39
CLN6-202ENST00000538696 ZBTB17Q13105 803 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 RFTN1Q14699 578 aaPredicted RBP17.47■□□□□ 0.39
CLN6-202ENST00000538696 DLG2Q15700 870 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 CCDC25Q86WR0 208 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 PPIL6Q8IXY8 311 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 CHPFQ8IZ52 775 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 ZCCHC9Q8N567 271 aaKnown RBP17.47■□□□□ 0.39
CLN6-202ENST00000538696 TEX26Q8N6G2 289 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 NAT8LQ8N9F0 302 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 CLDN23Q96B33 292 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 ZBTB9Q96C00 473 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 IL12RB2Q99665 862 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 CEP44Q9C0F1 390 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 RAB6BQ9NRW1 208 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 LHX3Q9UBR4 397 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 NDC80O14777 642 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 NPC1O15118 1278 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 ADAM23O75077 832 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 METTL18O95568 372 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 PTPN3P26045 913 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 NTSR1P30989 418 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 HSD17B3P37058 310 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms