RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 MARCH8Q5T0T0 291 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 IL23RQ5VWK5 629 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 TMEM198Q66K66 360 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 CHSY3Q70JA7 882 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 PIWIL4Q7Z3Z4 852 aaKnown RBP12.31□□□□□ -0.44
CPSF7-218ENST00000537641 CROCCP3Q8IVE0 287 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 KLHDC8BQ8IXV7 354 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 TRIML2Q8N7C3 387 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 KDM1BQ8NB78 822 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 ATP6V1E2Q96A05 226 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 HDAC11Q96DB2 347 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 MFSD3Q96ES6 412 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 NPAS2Q99743 824 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 EFHD1Q9BUP0 239 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 MLPHQ9BV36 600 aaPredicted RBP12.31□□□□□ -0.44
CPSF7-218ENST00000537641 RUVBL2Q9Y230 463 aaKnown RBP12.31□□□□□ -0.44
CPSF7-218ENST00000537641 MYOCOSA0A1B0GUC4 107 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 GLTPD2A6NH11 291 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 DLX3O60479 287 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 USP12O75317 370 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 SLC35E2BP0CK96 405 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 YY1P25490 414 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 PCSK6P29122 969 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 SLC7A1P30825 629 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 ABCG1P45844 678 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 CCR10P46092 362 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 HCAR3P49019 387 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 ZNF135P52742 658 aaPredicted RBP12.3□□□□□ -0.44
CPSF7-218ENST00000537641 SCAPQ12770 1279 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 CDH17Q12864 832 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 OLIG2Q13516 323 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 ITGA7Q13683 1181 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 GRB14Q14449 540 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 ZBTB6Q15916 424 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 DGKDQ16760 1214 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 NAPEPLDQ6IQ20 393 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 HACD2Q6Y1H2 254 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 GPR142Q7Z601 462 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 DPP9Q86TI2 863 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 CNTN4Q8IWV2 1026 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 FSTL5Q8N475 847 aaPredicted RBP12.3□□□□□ -0.44
CPSF7-218ENST00000537641 ACVR1CQ8NER5 493 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 KCTD4Q8WVF5 259 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 PBXIP1Q96AQ6 731 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 RMND5BQ96G75 393 aaPredicted RBP12.3□□□□□ -0.44
CPSF7-218ENST00000537641 PPP1R36Q96LQ0 422 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 ZNF560Q96MR9 790 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 SLC2A13Q96QE2 648 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 KIFC1Q9BW19 673 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 FTHL17Q9BXU8 183 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 COQ10BQ9H8M1 238 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 TBCCD1Q9NVR7 557 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 TUBA8Q9NY65 449 aaPredicted RBP12.3□□□□□ -0.44
CPSF7-218ENST00000537641 ADA2Q9NZK5 511 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 XPR1Q9UBH6 696 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 PCDHGA7Q9Y5G6 932 aa12.3□□□□□ -0.44
CPSF7-218ENST00000537641 C7orf72A4D263 438 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 RRN3P2A6NIE6 340 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 TRIM64CA6NLI5 447 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 H3BSA7 217 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 STX16-NPEPL1H3BU86 382 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 ZNF701M0R085 212 aaPredicted RBP12.29□□□□□ -0.44
CPSF7-218ENST00000537641 KCNK1O00180 336 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 ZBTB24O43167 697 aaPredicted RBP12.29□□□□□ -0.44
CPSF7-218ENST00000537641 SMPD1P17405 629 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 PTPN1P18031 435 aaKnown RBP12.29□□□□□ -0.44
CPSF7-218ENST00000537641 ERCC2P18074 760 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 CD68P34810 354 aaPredicted RBP12.29□□□□□ -0.44
CPSF7-218ENST00000537641 CDC42EP1Q00587 391 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 SEMA3BQ13214 749 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 LRP8Q14114 963 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 PRPSAP1Q14558 356 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 KCTD21Q4G0X4 260 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 CERCAMQ5T4B2 595 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 C9orf57Q5W0N0 161 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 REP15Q6BDI9 236 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 IQSEC1Q6DN90 963 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 GK5Q6ZS86 529 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 LPCAT2Q7L5N7 544 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 LINC00523Q86TU6 105 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 CENPLQ8N0S6 344 aaPredicted RBP12.29□□□□□ -0.44
CPSF7-218ENST00000537641 PACRGLQ8N7B6 248 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 RNF148Q8N7C7 305 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 ANKFN1Q8N957 763 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 OR6J1Q8NGC5 347 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 ADAM32Q8TC27 787 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 BRI3BPQ8WY22 251 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 WNT8BQ93098 351 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 FAM149B1Q96BN6 582 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 ANKRD60Q9BZ19 345 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 TRPV6Q9H1D0 765 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 MRPL46Q9H2W6 279 aaKnown RBP12.29□□□□□ -0.44
CPSF7-218ENST00000537641 SNX25Q9H3E2 840 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 ABHD16BQ9H3Z7 469 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 VPS45Q9NRW7 570 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 NCKIPSDQ9NZQ3 722 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.29□□□□□ -0.44
CPSF7-218ENST00000537641 TUBGCP4Q9UGJ1 667 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 ZNHIT2Q9UHR6 403 aa12.29□□□□□ -0.44
CPSF7-218ENST00000537641 SLC8A2Q9UPR5 921 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms