RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 GOLGA8TH3BQL2 631 aa16.83■□□□□ 0.28
CTSB-228ENST00000533455 XPOTO43592 962 aaKnown RBP16.83■□□□□ 0.28
CTSB-228ENST00000533455 CACNG3O60359 315 aa16.83■□□□□ 0.28
CTSB-228ENST00000533455 AHSGP02765 367 aa16.83■□□□□ 0.28
CTSB-228ENST00000533455 YBX3P16989 372 aaKnown RBP eCLIP16.83■□□□□ 0.281e-9■■□□□ 12.9
CTSB-228ENST00000533455 AVPR1AP37288 418 aa16.83■□□□□ 0.28
CTSB-228ENST00000533455 INHBCP55103 352 aa16.83■□□□□ 0.28
CTSB-228ENST00000533455 DNAJB13P59910 316 aa16.83■□□□□ 0.28
CTSB-228ENST00000533455 HPCAP84074 193 aa16.83■□□□□ 0.28
CTSB-228ENST00000533455 TRIM25Q14258 630 aaKnown RBP16.83■□□□□ 0.28
CTSB-228ENST00000533455 PRPSAP1Q14558 356 aa16.83■□□□□ 0.28
CTSB-228ENST00000533455 IL23RQ5VWK5 629 aa16.83■□□□□ 0.28
CTSB-228ENST00000533455 ISLR2Q6UXK2 745 aa16.83■□□□□ 0.28
CTSB-228ENST00000533455 CLEC20AQ6ZU45 233 aa16.83■□□□□ 0.28
CTSB-228ENST00000533455 PAQR9Q6ZVX9 377 aa16.83■□□□□ 0.28
CTSB-228ENST00000533455 PIWIL4Q7Z3Z4 852 aaKnown RBP16.83■□□□□ 0.28
CTSB-228ENST00000533455 TOP6BLQ8N6T0 577 aa16.83■□□□□ 0.28
CTSB-228ENST00000533455 ZSCAN18Q8TBC5 510 aaPredicted RBP16.83■□□□□ 0.28
CTSB-228ENST00000533455 PGAP3Q96FM1 320 aaPredicted RBP16.83■□□□□ 0.28
CTSB-228ENST00000533455 TSPAN18Q96SJ8 248 aa16.83■□□□□ 0.28
CTSB-228ENST00000533455 HAUS8Q9BT25 410 aa16.83■□□□□ 0.28
CTSB-228ENST00000533455 MRPL1Q9BYD6 325 aaKnown RBP16.83■□□□□ 0.28
CTSB-228ENST00000533455 UNC93B1Q9H1C4 597 aa16.83■□□□□ 0.28
CTSB-228ENST00000533455 MRM3Q9HC36 420 aaKnown RBP16.83■□□□□ 0.28
CTSB-228ENST00000533455 HACD3Q9P035 362 aa16.83■□□□□ 0.28
CTSB-228ENST00000533455 MAGED2Q9UNF1 606 aaPredicted RBP16.83■□□□□ 0.28
CTSB-228ENST00000533455 CEPT1Q9Y6K0 416 aa16.83■□□□□ 0.28
CTSB-228ENST00000533455 NUP205Q92621 2012 aa16.83■□□□□ 0.28
CTSB-228ENST00000533455 SMIM28A0A1B0GU29 152 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 MYOCOSA0A1B0GUC4 107 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 CXCL11O14625 94 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 HUS1O60921 280 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 SAT1P21673 171 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 USP46P62068 366 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 MAPRE2Q15555 327 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 XKR4Q5GH76 650 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 PCID2Q5JVF3 399 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 KLC3Q6P597 504 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 GK5Q6ZS86 529 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 DNAJC1Q96KC8 554 aaKnown RBP16.82■□□□□ 0.28
CTSB-228ENST00000533455 UHRF1Q96T88 793 aaPredicted RBP16.82■□□□□ 0.28
CTSB-228ENST00000533455 OSBPL11Q9BXB4 747 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 MRPL46Q9H2W6 279 aaKnown RBP16.82■□□□□ 0.28
CTSB-228ENST00000533455 VTA1Q9NP79 307 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.82■□□□□ 0.28
CTSB-228ENST00000533455 FAM95CA0A1B0GW59 222 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 KCNU1A8MYU2 1149 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 CLDN5O00501 218 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 NRP1O14786 923 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 TRIM24O15164 1050 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 KCNE1P15382 129 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 ZNF23P17027 643 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 RANBP1P43487 201 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 TKTL1P51854 596 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 CCNA1P78396 465 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 TRAP1Q12931 704 aaKnown RBP16.82■□□□□ 0.28
CTSB-228ENST00000533455 SQLEQ14534 574 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 PCBP1Q15365 356 aaKnown RBP eCLIP16.82■□□□□ 0.285e-8■■■□□ 16.3
CTSB-228ENST00000533455 IRAK1BP1Q5VVH5 260 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 PKN3Q6P5Z2 889 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 MFSD6LQ8IWD5 586 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 ATP6V1E2Q96A05 226 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 EME1Q96AY2 570 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 NXNL1Q96CM4 212 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 OTUD5Q96G74 571 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 FAR2Q96K12 515 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 TSGA13Q96PP4 275 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 SUDS3Q9H7L9 328 aaPredicted RBP16.82■□□□□ 0.28
CTSB-228ENST00000533455 RNF19AQ9NV58 838 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 ADA2Q9NZK5 511 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 NCKIPSDQ9NZQ3 722 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 RNF11Q9Y3C5 154 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 AP4S1Q9Y587 144 aa16.82■□□□□ 0.28
CTSB-228ENST00000533455 C7orf72A4D263 438 aa16.81■□□□□ 0.28
CTSB-228ENST00000533455 TMEM233B4DJY2 109 aa16.81■□□□□ 0.28
CTSB-228ENST00000533455 STMN1P16949 149 aa16.81■□□□□ 0.28
CTSB-228ENST00000533455 PTPN1P18031 435 aaKnown RBP16.81■□□□□ 0.28
CTSB-228ENST00000533455 SLC5A2P31639 672 aa16.81■□□□□ 0.28
CTSB-228ENST00000533455 ALDH3B2P48448 385 aa16.81■□□□□ 0.28
CTSB-228ENST00000533455 KPNA2P52292 529 aaKnown RBP16.81■□□□□ 0.28
CTSB-228ENST00000533455 PGGT1BP53609 377 aa16.81■□□□□ 0.28
CTSB-228ENST00000533455 ATXN3P54252 364 aaPredicted RBP16.81■□□□□ 0.28
CTSB-228ENST00000533455 DAOAP59103 153 aa16.81■□□□□ 0.28
CTSB-228ENST00000533455 RHDQ02161 417 aa16.81■□□□□ 0.28
CTSB-228ENST00000533455 ZNF33AQ06730 810 aa16.81■□□□□ 0.28
CTSB-228ENST00000533455 STX5Q13190 355 aa16.81■□□□□ 0.28
CTSB-228ENST00000533455 LRP8Q14114 963 aa16.81■□□□□ 0.28
CTSB-228ENST00000533455 IKBKEQ14164 716 aa16.81■□□□□ 0.28
CTSB-228ENST00000533455 PSMD5Q16401 504 aa16.81■□□□□ 0.28
CTSB-228ENST00000533455 DGKDQ16760 1214 aa16.81■□□□□ 0.28
CTSB-228ENST00000533455 AMIGO2Q86SJ2 522 aa16.81■□□□□ 0.28
CTSB-228ENST00000533455 CARM1Q86X55 608 aa16.81■□□□□ 0.28
CTSB-228ENST00000533455 CEP97Q8IW35 865 aa16.81■□□□□ 0.28
CTSB-228ENST00000533455 CCDC117Q8IWD4 279 aaPredicted RBP16.81■□□□□ 0.28
CTSB-228ENST00000533455 CCNYL1Q8N7R7 359 aa16.81■□□□□ 0.28
CTSB-228ENST00000533455 TXNDC5Q8NBS9 432 aaKnown RBP16.81■□□□□ 0.28
CTSB-228ENST00000533455 SHCBP1Q8NEM2 672 aa16.81■□□□□ 0.28
CTSB-228ENST00000533455 RIN3Q8TB24 985 aa16.81■□□□□ 0.28
CTSB-228ENST00000533455 HMGCLL1Q8TB92 370 aa16.81■□□□□ 0.28
CTSB-228ENST00000533455 LZICQ8WZA0 190 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms