RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 PDE2AO00408 941 aaPredicted RBP12.71□□□□□ -0.37
COPB1-208ENST00000532088 STK10O94804 968 aaKnown RBP12.71□□□□□ -0.37
COPB1-208ENST00000532088 TMCC1O94876 653 aa12.71□□□□□ -0.37
COPB1-208ENST00000532088 MAP3K6O95382 1288 aa12.71□□□□□ -0.37
COPB1-208ENST00000532088 GSRP00390 522 aa12.71□□□□□ -0.37
COPB1-208ENST00000532088 VAV1P15498 845 aa12.71□□□□□ -0.37
COPB1-208ENST00000532088 CES1P23141 567 aa12.71□□□□□ -0.37
COPB1-208ENST00000532088 TARSP26639 723 aaKnown RBP12.71□□□□□ -0.37
COPB1-208ENST00000532088 RBL1P28749 1068 aa12.71□□□□□ -0.37
COPB1-208ENST00000532088 CTSOP43234 321 aaPredicted RBP12.71□□□□□ -0.37
COPB1-208ENST00000532088 MAPK8P45983 427 aa12.71□□□□□ -0.37
COPB1-208ENST00000532088 RPS9P46781 194 aaKnown RBP12.71□□□□□ -0.37
COPB1-208ENST00000532088 ZNF234Q14588 700 aa12.71□□□□□ -0.37
COPB1-208ENST00000532088 P3H1Q32P28 736 aa12.71□□□□□ -0.37
COPB1-208ENST00000532088 TEX44Q53QW1 395 aa12.71□□□□□ -0.37
COPB1-208ENST00000532088 C4orf22Q6V702 233 aa12.71□□□□□ -0.37
COPB1-208ENST00000532088 ADAT2Q7Z6V5 191 aaKnown RBP12.71□□□□□ -0.37
COPB1-208ENST00000532088 ZNF513Q8N8E2 541 aaPredicted RBP12.71□□□□□ -0.37
COPB1-208ENST00000532088 CEP112Q8N8E3 955 aa12.71□□□□□ -0.37
COPB1-208ENST00000532088 ATP11CQ8NB49 1132 aa12.71□□□□□ -0.37
COPB1-208ENST00000532088 NETO2Q8NC67 525 aa12.71□□□□□ -0.37
COPB1-208ENST00000532088 SPATA4Q8NEY3 305 aa12.71□□□□□ -0.37
COPB1-208ENST00000532088 PJA1Q8NG27 643 aa12.71□□□□□ -0.37
COPB1-208ENST00000532088 USP33Q8TEY7 942 aa12.71□□□□□ -0.37
COPB1-208ENST00000532088 FRS2Q8WU20 508 aa12.71□□□□□ -0.37
COPB1-208ENST00000532088 MAGOHBQ96A72 148 aaKnown RBP12.71□□□□□ -0.37
COPB1-208ENST00000532088 CCDC114Q96M63 670 aa12.71□□□□□ -0.37
COPB1-208ENST00000532088 PPP1R2P1Q96PQ5 205 aa12.71□□□□□ -0.37
COPB1-208ENST00000532088 GABRG3Q99928 467 aa12.71□□□□□ -0.37
COPB1-208ENST00000532088 MGME1Q9BQP7 344 aa12.71□□□□□ -0.37
COPB1-208ENST00000532088 CINPQ9BW66 212 aaPredicted RBP12.71□□□□□ -0.37
COPB1-208ENST00000532088 AP1M1Q9BXS5 423 aa12.71□□□□□ -0.37
COPB1-208ENST00000532088 L2HGDHQ9H9P8 463 aa12.71□□□□□ -0.37
COPB1-208ENST00000532088 FBRSQ9HAH7 460 aa12.71□□□□□ -0.37
COPB1-208ENST00000532088 USP29Q9HBJ7 922 aa12.71□□□□□ -0.37
COPB1-208ENST00000532088 PCYOX1Q9UHG3 505 aa12.71□□□□□ -0.37
COPB1-208ENST00000532088 HCN2Q9UL51 889 aa12.71□□□□□ -0.37
COPB1-208ENST00000532088 ATP8A1Q9Y2Q0 1164 aa12.71□□□□□ -0.37
COPB1-208ENST00000532088 EDDM13A0A1B0GTR0 161 aa12.7□□□□□ -0.38
COPB1-208ENST00000532088 FAM170BA6NMN3 283 aa12.7□□□□□ -0.38
COPB1-208ENST00000532088 OPHN1O60890 802 aa12.7□□□□□ -0.38
COPB1-208ENST00000532088 ATG13O75143 517 aa12.7□□□□□ -0.38
COPB1-208ENST00000532088 MT-CO1P00395 513 aa12.7□□□□□ -0.38
COPB1-208ENST00000532088 PTPN3P26045 913 aa12.7□□□□□ -0.38
COPB1-208ENST00000532088 NTSR1P30989 418 aa12.7□□□□□ -0.38
COPB1-208ENST00000532088 COILP38432 576 aaPredicted RBP12.7□□□□□ -0.38
COPB1-208ENST00000532088 MMP13P45452 471 aa12.7□□□□□ -0.38
COPB1-208ENST00000532088 SLC10A7Q0GE19 358 aa12.7□□□□□ -0.38
COPB1-208ENST00000532088 WASHC5Q12768 1159 aa12.7□□□□□ -0.38
COPB1-208ENST00000532088 FZD5Q13467 585 aa12.7□□□□□ -0.38
COPB1-208ENST00000532088 ZNF235Q14590 738 aa12.7□□□□□ -0.38
COPB1-208ENST00000532088 GRM3Q14832 879 aa12.7□□□□□ -0.38
COPB1-208ENST00000532088 CYTH1Q15438 398 aa12.7□□□□□ -0.38
COPB1-208ENST00000532088 DLG2Q15700 870 aa12.7□□□□□ -0.38
COPB1-208ENST00000532088 SLC14A2Q15849 920 aa12.7□□□□□ -0.38
COPB1-208ENST00000532088 HNRNPA1L2Q32P51 320 aaKnown RBP12.7□□□□□ -0.38
COPB1-208ENST00000532088 MAP7D1Q3KQU3 841 aa12.7□□□□□ -0.38
COPB1-208ENST00000532088 FNDC3BQ53EP0 1204 aaKnown RBP12.7□□□□□ -0.38
COPB1-208ENST00000532088 EOGTQ5NDL2 527 aa12.7□□□□□ -0.38
COPB1-208ENST00000532088 DNTTIP2Q5QJE6 756 aaKnown RBP12.7□□□□□ -0.38
COPB1-208ENST00000532088 EGFLAMQ63HQ2 1017 aa12.7□□□□□ -0.38
COPB1-208ENST00000532088 SDE2Q6IQ49 451 aa12.7□□□□□ -0.38
COPB1-208ENST00000532088 C22orf39Q6P5X5 142 aa12.7□□□□□ -0.38
COPB1-208ENST00000532088 SYDE1Q6ZW31 735 aaPredicted RBP12.7□□□□□ -0.38
COPB1-208ENST00000532088 ALLCQ8N6M5 410 aa12.7□□□□□ -0.38
COPB1-208ENST00000532088 CYB5D2Q8WUJ1 264 aa12.7□□□□□ -0.38
COPB1-208ENST00000532088 SORCS1Q8WY21 1168 aa12.7□□□□□ -0.38
COPB1-208ENST00000532088 ATG4AQ8WYN0 398 aa12.7□□□□□ -0.38
COPB1-208ENST00000532088 RPL10LQ96L21 214 aaKnown RBP12.7□□□□□ -0.38
COPB1-208ENST00000532088 TEKT5Q96M29 485 aa12.7□□□□□ -0.38
COPB1-208ENST00000532088 SMARCAL1Q9NZC9 954 aa12.7□□□□□ -0.38
COPB1-208ENST00000532088 NDRG2Q9UN36 371 aaKnown RBP12.7□□□□□ -0.38
COPB1-208ENST00000532088 ZNF148Q9UQR1 794 aa12.7□□□□□ -0.38
COPB1-208ENST00000532088 STON1Q9Y6Q2 735 aa12.7□□□□□ -0.38
COPB1-208ENST00000532088 F5P12259 2224 aa12.7□□□□□ -0.38
COPB1-208ENST00000532088 WASH3PC4AMC7 463 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 ALOX15BO15296 676 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 KCNN4O15554 427 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 ZNF821O75541 412 aaPredicted RBP12.69□□□□□ -0.38
COPB1-208ENST00000532088 GCATO75600 419 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 NEBLO76041 1014 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 IGSF6O95976 241 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 CR2P20023 1033 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 CD72P21854 359 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 IL12RB1P42701 662 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 STK19P49842 368 aaPredicted RBP12.69□□□□□ -0.38
COPB1-208ENST00000532088 RHOAP61586 193 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 SNRPD1P62314 119 aaKnown RBP12.69□□□□□ -0.38
COPB1-208ENST00000532088 ZBTB17Q13105 803 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 DHX34Q14147 1143 aaKnown RBP12.69□□□□□ -0.38
COPB1-208ENST00000532088 UBXN2BQ14CS0 331 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 ITPRIPL1Q6GPH6 555 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 TTC27Q6P3X3 843 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 CCDC137Q6PK04 289 aaKnown RBP12.69□□□□□ -0.38
COPB1-208ENST00000532088 SERPINA13PQ6UXR4 307 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 LINGO4Q6UY18 593 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 SFTPA1Q8IWL2 248 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 CCDC105Q8IYK2 499 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 CHPFQ8IZ52 775 aa12.69□□□□□ -0.38
COPB1-208ENST00000532088 CCDC33Q8N5R6 958 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms