RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 SPINT1O43278 529 aa20.19■□□□□ 0.82
HIPK3-205ENST00000531504 MED7O43513 233 aa20.19■□□□□ 0.82
HIPK3-205ENST00000531504 GCATO75600 419 aa20.19■□□□□ 0.82
HIPK3-205ENST00000531504 FMO5P49326 533 aa20.19■□□□□ 0.82
HIPK3-205ENST00000531504 PFN3P60673 137 aa20.19■□□□□ 0.82
HIPK3-205ENST00000531504 CAMK4Q16566 473 aa20.19■□□□□ 0.82
HIPK3-205ENST00000531504 TBR1Q16650 682 aa20.19■□□□□ 0.82
HIPK3-205ENST00000531504 B3GNT8Q7Z7M8 397 aa20.19■□□□□ 0.82
HIPK3-205ENST00000531504 TMEM110Q86TL2 294 aa20.19■□□□□ 0.82
HIPK3-205ENST00000531504 SMYD4Q8IYR2 804 aaPredicted RBP20.19■□□□□ 0.82
HIPK3-205ENST00000531504 SCG3Q8WXD2 468 aaKnown RBP20.19■□□□□ 0.82
HIPK3-205ENST00000531504 TMEM74Q96NL1 305 aa20.19■□□□□ 0.82
HIPK3-205ENST00000531504 PSMB7Q99436 277 aa20.19■□□□□ 0.82
HIPK3-205ENST00000531504 KLF6Q99612 283 aaPredicted RBP20.19■□□□□ 0.82
HIPK3-205ENST00000531504 LRRC61Q9BV99 259 aa20.19■□□□□ 0.82
HIPK3-205ENST00000531504 C1QTNF2Q9BXJ5 285 aa20.19■□□□□ 0.82
HIPK3-205ENST00000531504 TNKS2Q9H2K2 1166 aa20.19■□□□□ 0.82
HIPK3-205ENST00000531504 METTL14Q9HCE5 456 aaKnown RBP20.19■□□□□ 0.82
HIPK3-205ENST00000531504 GEMIN8Q9NWZ8 242 aaKnown RBP20.19■□□□□ 0.82
HIPK3-205ENST00000531504 DOLKQ9UPQ8 538 aa20.19■□□□□ 0.82
HIPK3-205ENST00000531504 PCDHB11Q9Y5F2 797 aa20.19■□□□□ 0.82
HIPK3-205ENST00000531504 HS3ST4Q9Y661 456 aa20.19■□□□□ 0.82
HIPK3-205ENST00000531504 WASF2Q9Y6W5 498 aa20.19■□□□□ 0.82
HIPK3-205ENST00000531504 SMAD6O43541 496 aaKnown RBP20.18■□□□□ 0.82
HIPK3-205ENST00000531504 TSPAN6O43657 245 aa20.18■□□□□ 0.82
HIPK3-205ENST00000531504 GLI1P08151 1106 aa20.18■□□□□ 0.82
HIPK3-205ENST00000531504 L1CAMP32004 1257 aa20.18■□□□□ 0.82
HIPK3-205ENST00000531504 NOS2P35228 1153 aa20.18■□□□□ 0.82
HIPK3-205ENST00000531504 SRSF6Q13247 344 aaKnown RBP20.18■□□□□ 0.82
HIPK3-205ENST00000531504 C1orf61Q13536 156 aa20.18■□□□□ 0.82
HIPK3-205ENST00000531504 TPRG1LQ5T0D9 272 aa20.18■□□□□ 0.82
HIPK3-205ENST00000531504 DENND1BQ6P3S1 775 aa20.18■□□□□ 0.82
HIPK3-205ENST00000531504 DPY19L3Q6ZPD9 716 aa20.18■□□□□ 0.82
HIPK3-205ENST00000531504 SETD3Q86TU7 594 aaPredicted RBP20.18■□□□□ 0.82
HIPK3-205ENST00000531504 ARL10Q8N8L6 244 aa20.18■□□□□ 0.82
HIPK3-205ENST00000531504 ASB12Q8WXK4 309 aa20.18■□□□□ 0.82
HIPK3-205ENST00000531504 KAT5Q92993 513 aa20.18■□□□□ 0.82
HIPK3-205ENST00000531504 PISDQ9UG56 409 aa20.18■□□□□ 0.82
HIPK3-205ENST00000531504 RNF103O00237 685 aa20.17■□□□□ 0.82
HIPK3-205ENST00000531504 NEMP1O14524 444 aa20.17■□□□□ 0.82
HIPK3-205ENST00000531504 CASC3O15234 703 aaKnown RBP20.17■□□□□ 0.82
HIPK3-205ENST00000531504 PMM2O15305 246 aa20.17■□□□□ 0.82
HIPK3-205ENST00000531504 YY2O15391 372 aa20.17■□□□□ 0.82
HIPK3-205ENST00000531504 CCKBRP32239 447 aa20.17■□□□□ 0.82
HIPK3-205ENST00000531504 GCNT1Q02742 428 aa20.17■□□□□ 0.82
HIPK3-205ENST00000531504 C5orf22Q49AR2 442 aa20.17■□□□□ 0.82
HIPK3-205ENST00000531504 FAXCQ5TGI0 409 aa20.17■□□□□ 0.82
HIPK3-205ENST00000531504 LINGO4Q6UY18 593 aa20.17■□□□□ 0.82
HIPK3-205ENST00000531504 DEFB106AQ8N104 65 aa20.17■□□□□ 0.82
HIPK3-205ENST00000531504 RAB7BQ96AH8 199 aa20.17■□□□□ 0.82
HIPK3-205ENST00000531504 PPP1R13BQ96KQ4 1090 aa20.17■□□□□ 0.82
HIPK3-205ENST00000531504 HEPHQ9BQS7 1158 aa20.17■□□□□ 0.82
HIPK3-205ENST00000531504 FOXP3Q9BZS1 431 aa20.17■□□□□ 0.82
HIPK3-205ENST00000531504 CEP44Q9C0F1 390 aa20.17■□□□□ 0.82
HIPK3-205ENST00000531504 ADNPQ9H2P0 1102 aa20.17■□□□□ 0.82
HIPK3-205ENST00000531504 TCEAL2Q9H3H9 227 aaPredicted RBP20.17■□□□□ 0.82
HIPK3-205ENST00000531504 GULP1Q9UBP9 304 aa20.17■□□□□ 0.82
HIPK3-205ENST00000531504 IGLON5A6NGN9 336 aa20.16■□□□□ 0.82
HIPK3-205ENST00000531504 HSF2BPO75031 334 aa20.16■□□□□ 0.82
HIPK3-205ENST00000531504 PAGE1O75459 146 aa20.16■□□□□ 0.82
HIPK3-205ENST00000531504 LETM1O95202 739 aaPredicted RBP20.16■□□□□ 0.82
HIPK3-205ENST00000531504 HGFP14210 728 aa20.16■□□□□ 0.82
HIPK3-205ENST00000531504 TSHRP16473 764 aa20.16■□□□□ 0.82
HIPK3-205ENST00000531504 GGCXP38435 758 aa20.16■□□□□ 0.82
HIPK3-205ENST00000531504 YPEL5P62699 121 aa20.16■□□□□ 0.82
HIPK3-205ENST00000531504 NME3Q13232 169 aa20.16■□□□□ 0.82
HIPK3-205ENST00000531504 PNOCQ13519 176 aa20.16■□□□□ 0.82
HIPK3-205ENST00000531504 RETSATQ6NUM9 610 aa20.16■□□□□ 0.82
HIPK3-205ENST00000531504 RBM43Q6ZSC3 357 aaKnown RBP20.16■□□□□ 0.82
HIPK3-205ENST00000531504 RRAGAQ7L523 313 aa20.16■□□□□ 0.82
HIPK3-205ENST00000531504 VASH2Q86V25 355 aa20.16■□□□□ 0.82
HIPK3-205ENST00000531504 FSTL5Q8N475 847 aaPredicted RBP20.16■□□□□ 0.82
HIPK3-205ENST00000531504 PCDH20Q8N6Y1 951 aaKnown RBP20.16■□□□□ 0.82
HIPK3-205ENST00000531504 CCDC74AQ96AQ1 378 aa20.16■□□□□ 0.82
HIPK3-205ENST00000531504 TMEM159Q96B96 161 aa20.16■□□□□ 0.82
HIPK3-205ENST00000531504 SLC2A13Q96QE2 648 aa20.16■□□□□ 0.82
HIPK3-205ENST00000531504 SIK2Q9H0K1 926 aa20.16■□□□□ 0.82
HIPK3-205ENST00000531504 ASNSD1Q9NWL6 643 aa20.16■□□□□ 0.82
HIPK3-205ENST00000531504 LOXL2Q9Y4K0 774 aa20.16■□□□□ 0.82
HIPK3-205ENST00000531504 BSNQ9UPA5 3926 aa20.15■□□□□ 0.82
HIPK3-205ENST00000531504 ENDOD1O94919 500 aa20.15■□□□□ 0.82
HIPK3-205ENST00000531504 RPLP0P05388 317 aaKnown RBP20.15■□□□□ 0.82
HIPK3-205ENST00000531504 KRT5P13647 590 aa20.15■□□□□ 0.82
HIPK3-205ENST00000531504 BLKP51451 505 aa20.15■□□□□ 0.82
HIPK3-205ENST00000531504 PPARDQ03181 441 aa20.15■□□□□ 0.82
HIPK3-205ENST00000531504 PDCLQ13371 301 aa20.15■□□□□ 0.82
HIPK3-205ENST00000531504 MORC3Q14149 939 aa20.15■□□□□ 0.82
HIPK3-205ENST00000531504 ELOCQ15369 112 aa20.15■□□□□ 0.82
HIPK3-205ENST00000531504 TAF5Q15542 800 aa20.15■□□□□ 0.82
HIPK3-205ENST00000531504 EFHC1Q5JVL4 640 aa20.15■□□□□ 0.82
HIPK3-205ENST00000531504 LVRNQ6Q4G3 990 aa20.15■□□□□ 0.82
HIPK3-205ENST00000531504 MACC1Q6ZN28 852 aa20.15■□□□□ 0.82
HIPK3-205ENST00000531504 PARS2Q7L3T8 475 aaKnown RBP20.15■□□□□ 0.82
HIPK3-205ENST00000531504 SDR16C5Q8N3Y7 309 aa20.15■□□□□ 0.82
HIPK3-205ENST00000531504 KYQ8NBH2 561 aa20.15■□□□□ 0.82
HIPK3-205ENST00000531504 OR6C4Q8NGE1 309 aa20.15■□□□□ 0.82
HIPK3-205ENST00000531504 ZNF564Q8TBZ8 553 aaPredicted RBP20.15■□□□□ 0.82
HIPK3-205ENST00000531504 ARHGEF26Q96DR7 871 aa20.15■□□□□ 0.82
HIPK3-205ENST00000531504 C1QTNF7Q9BXJ2 289 aa20.15■□□□□ 0.82
HIPK3-205ENST00000531504 CPEB1Q9BZB8 566 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms