RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 ETS2P15036 469 aa13.21□□□□□ -0.3
RBM39-243ENST00000528062 DESP17661 470 aa13.21□□□□□ -0.3
RBM39-243ENST00000528062 LMO2P25791 158 aa13.21□□□□□ -0.3
RBM39-243ENST00000528062 CTNNB1P35222 781 aa13.21□□□□□ -0.3
RBM39-243ENST00000528062 SERPINB6P35237 376 aa13.21□□□□□ -0.3
RBM39-243ENST00000528062 GP5P40197 560 aa13.21□□□□□ -0.3
RBM39-243ENST00000528062 MAGEA12P43365 314 aa13.21□□□□□ -0.3
RBM39-243ENST00000528062 MTTPP55157 894 aa13.21□□□□□ -0.3
RBM39-243ENST00000528062 IRF9Q00978 393 aa13.21□□□□□ -0.3
RBM39-243ENST00000528062 CAMK1Q14012 370 aa13.21□□□□□ -0.3
RBM39-243ENST00000528062 KIAA0319Q5VV43 1072 aa13.21□□□□□ -0.3
RBM39-243ENST00000528062 EPGNQ6UW88 154 aa13.21□□□□□ -0.3
RBM39-243ENST00000528062 KBTBD6Q86V97 674 aa13.21□□□□□ -0.3
RBM39-243ENST00000528062 ZDHHC17Q8IUH5 632 aa13.21□□□□□ -0.3
RBM39-243ENST00000528062 ZNF567Q8N184 647 aa13.21□□□□□ -0.3
RBM39-243ENST00000528062 TOP6BLQ8N6T0 577 aa13.21□□□□□ -0.3
RBM39-243ENST00000528062 OR6B3Q8NGW1 331 aa13.21□□□□□ -0.3
RBM39-243ENST00000528062 AGR3Q8TD06 166 aa13.21□□□□□ -0.3
RBM39-243ENST00000528062 JADE3Q92613 823 aa13.21□□□□□ -0.3
RBM39-243ENST00000528062 CERS2Q96G23 380 aa13.21□□□□□ -0.3
RBM39-243ENST00000528062 OR52B2Q96RD2 323 aa13.21□□□□□ -0.3
RBM39-243ENST00000528062 AGAP2Q99490 1192 aa13.21□□□□□ -0.3
RBM39-243ENST00000528062 GORASP1Q9BQQ3 440 aa13.21□□□□□ -0.3
RBM39-243ENST00000528062 CCDC28BQ9BUN5 200 aa13.21□□□□□ -0.3
RBM39-243ENST00000528062 CAB39LQ9H9S4 337 aa13.21□□□□□ -0.3
RBM39-243ENST00000528062 CERS4Q9HA82 394 aa13.21□□□□□ -0.3
RBM39-243ENST00000528062 SPG21Q9NZD8 308 aa13.21□□□□□ -0.3
RBM39-243ENST00000528062 PCDHB12Q9Y5F1 795 aa13.21□□□□□ -0.3
RBM39-243ENST00000528062 RPS6KL1Q9Y6S9 549 aa13.21□□□□□ -0.3
RBM39-243ENST00000528062 PRUNE2Q8WUY3 3088 aa13.21□□□□□ -0.3
RBM39-243ENST00000528062 HACD1B0YJ81 288 aa13.2□□□□□ -0.3
RBM39-243ENST00000528062 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.2□□□□□ -0.3
RBM39-243ENST00000528062 USP12O75317 370 aa13.2□□□□□ -0.3
RBM39-243ENST00000528062 PDGFRBP09619 1106 aa13.2□□□□□ -0.3
RBM39-243ENST00000528062 FGFR3P22607 806 aa13.2□□□□□ -0.3
RBM39-243ENST00000528062 ERVK-21P61565 698 aa13.2□□□□□ -0.3
RBM39-243ENST00000528062 KLF10Q13118 480 aa13.2□□□□□ -0.3
RBM39-243ENST00000528062 MED21Q13503 144 aa13.2□□□□□ -0.3
RBM39-243ENST00000528062 NAB1Q13506 487 aa13.2□□□□□ -0.3
RBM39-243ENST00000528062 GRM2Q14416 872 aa13.2□□□□□ -0.3
RBM39-243ENST00000528062 FAM171A1Q5VUB5 890 aa13.2□□□□□ -0.3
RBM39-243ENST00000528062 OTUD1Q5VV17 481 aaPredicted RBP13.2□□□□□ -0.3
RBM39-243ENST00000528062 ACVR1CQ8NER5 493 aa13.2□□□□□ -0.3
RBM39-243ENST00000528062 CDH19Q9H159 772 aa13.2□□□□□ -0.3
RBM39-243ENST00000528062 FAM124BQ9H5Z6 455 aaPredicted RBP13.2□□□□□ -0.3
RBM39-243ENST00000528062 CPSF2Q9P2I0 782 aaKnown RBP13.2□□□□□ -0.3
RBM39-243ENST00000528062 FZD10Q9ULW2 581 aa13.2□□□□□ -0.3
RBM39-243ENST00000528062 PCDHB8Q9UN66 801 aa13.2□□□□□ -0.3
RBM39-243ENST00000528062 PLXNA3P51805 1871 aa13.2□□□□□ -0.3
RBM39-243ENST00000528062 CASQ2O14958 399 aaPredicted RBP13.2□□□□□ -0.3
RBM39-243ENST00000528062 OPHN1O60890 802 aa13.2□□□□□ -0.3
RBM39-243ENST00000528062 STK10O94804 968 aaKnown RBP13.2□□□□□ -0.3
RBM39-243ENST00000528062 MRPL58Q14197 206 aaKnown RBP13.2□□□□□ -0.3
RBM39-243ENST00000528062 ARHGAP17Q68EM7 881 aa13.2□□□□□ -0.3
RBM39-243ENST00000528062 RSPO2Q6UXX9 243 aaPredicted RBP13.2□□□□□ -0.3
RBM39-243ENST00000528062 ST13P4Q8IZP2 240 aaPredicted RBP13.2□□□□□ -0.3
RBM39-243ENST00000528062 OR52K1Q8NGK4 314 aa13.2□□□□□ -0.3
RBM39-243ENST00000528062 ISL2Q96A47 359 aa13.2□□□□□ -0.3
RBM39-243ENST00000528062 LENG8Q96PV6 779 aaPredicted RBP13.2□□□□□ -0.3
RBM39-243ENST00000528062 PRDM12Q9H4Q4 367 aa13.2□□□□□ -0.3
RBM39-243ENST00000528062 ETAA1Q9NY74 926 aa13.2□□□□□ -0.3
RBM39-243ENST00000528062 LTFP02788 710 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 MX2P20592 715 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 ARL4AP40617 200 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 SMAD3P84022 425 aaKnown RBP13.19□□□□□ -0.3
RBM39-243ENST00000528062 LRIT3Q3SXY7 679 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 FSTL4Q6MZW2 842 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 DDX53Q86TM3 631 aaKnown RBP13.19□□□□□ -0.3
RBM39-243ENST00000528062 CCNYQ8ND76 341 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 APPL2Q8NEU8 664 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 OR10T2Q8NGX3 314 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 TMEM169Q96HH4 297 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 TMEM209Q96SK2 561 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 RBBP8Q99708 897 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 CPNE1Q99829 537 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 FAM96AQ9H5X1 160 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.19□□□□□ -0.35e-13■□□□□ 8.1
RBM39-243ENST00000528062 TXNDC16Q9P2K2 825 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 ARHGAP26Q9UNA1 814 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 SYNJ2BP-COX16A0A087WUM0 186 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 GOLGA8QA0A0J9YX86 632 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 GOLGA8OA6NCC3 632 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 CAPN8A6NHC0 703 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 GOLGA8NF8WBI6 632 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 KCNK1O00180 336 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 SOX1O00570 391 aaPredicted RBP13.19□□□□□ -0.3
RBM39-243ENST00000528062 HSPA4LO95757 839 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 SOD2P04179 222 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 POLBP06746 335 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 ODC1P11926 461 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 GLDCP23378 1020 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 WARSP23381 471 aaKnown RBP13.19□□□□□ -0.3
RBM39-243ENST00000528062 PPM1AP35813 382 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 CCR10P46092 362 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 RPL34P49207 117 aaKnown RBP13.19□□□□□ -0.3
RBM39-243ENST00000528062 GLUD2P49448 558 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 BST2Q10589 180 aaKnown RBP13.19□□□□□ -0.3
RBM39-243ENST00000528062 PDK3Q15120 406 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 RAB30Q15771 203 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 MMEL1Q495T6 779 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms