RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 GDF3Q9NR23 364 aa33.59■■■□□ 2.97
SSSCA1-205ENST00000527920 PCDHB9Q9Y5E1 797 aa33.59■■■□□ 2.97
SSSCA1-205ENST00000527920 CEP295Q9C0D2 2601 aa33.59■■■□□ 2.97
SSSCA1-205ENST00000527920 TLR4O00206 839 aa33.58■■■□□ 2.97
SSSCA1-205ENST00000527920 MAGEC1O60732 1142 aa33.58■■■□□ 2.97
SSSCA1-205ENST00000527920 ADRB3P13945 408 aa33.58■■■□□ 2.97
SSSCA1-205ENST00000527920 NXPH1P58417 271 aa33.58■■■□□ 2.97
SSSCA1-205ENST00000527920 FAM193AP78312 1265 aa33.58■■■□□ 2.97
SSSCA1-205ENST00000527920 PIGHQ14442 188 aaPredicted RBP33.58■■■□□ 2.97
SSSCA1-205ENST00000527920 ZNF284Q2VY69 593 aa33.58■■■□□ 2.97
SSSCA1-205ENST00000527920 SPECC1LQ69YQ0 1117 aa33.58■■■□□ 2.97
SSSCA1-205ENST00000527920 ALKBH5Q6P6C2 394 aaKnown RBP33.58■■■□□ 2.97
SSSCA1-205ENST00000527920 RFX8Q6ZV50 586 aa33.58■■■□□ 2.97
SSSCA1-205ENST00000527920 NIPA2Q8N8Q9 360 aa33.58■■■□□ 2.97
SSSCA1-205ENST00000527920 BAHD1Q8TBE0 780 aaPredicted RBP33.58■■■□□ 2.97
SSSCA1-205ENST00000527920 VOPP1Q96AW1 172 aa33.58■■■□□ 2.97
SSSCA1-205ENST00000527920 THAP2Q9H0W7 228 aa33.58■■■□□ 2.97
SSSCA1-205ENST00000527920 ERVMER34-1Q9H9K5 563 aa33.58■■■□□ 2.97
SSSCA1-205ENST00000527920 A0A1B0GTQ1 180 aa33.57■■■□□ 2.96
SSSCA1-205ENST00000527920 A0A1W2PQU0 124 aa33.57■■■□□ 2.96
SSSCA1-205ENST00000527920 YKT6O15498 198 aa33.57■■■□□ 2.96
SSSCA1-205ENST00000527920 TRIM16O95361 564 aa33.57■■■□□ 2.96
SSSCA1-205ENST00000527920 CYP1A2P05177 515 aa33.57■■■□□ 2.96
SSSCA1-205ENST00000527920 MYLK3Q32MK0 819 aa33.57■■■□□ 2.96
SSSCA1-205ENST00000527920 ZNF805Q5CZA5 627 aa33.57■■■□□ 2.96
SSSCA1-205ENST00000527920 FBXL19Q6PCT2 694 aa33.57■■■□□ 2.96
SSSCA1-205ENST00000527920 LEKR1Q6ZMV7 388 aa33.57■■■□□ 2.96
SSSCA1-205ENST00000527920 TMEM145Q8NBT3 493 aa33.57■■■□□ 2.96
SSSCA1-205ENST00000527920 RAB7BQ96AH8 199 aa33.57■■■□□ 2.96
SSSCA1-205ENST00000527920 NENFQ9UMX5 172 aa33.57■■■□□ 2.96
SSSCA1-205ENST00000527920 MFHAS1Q9Y4C4 1052 aa33.57■■■□□ 2.96
SSSCA1-205ENST00000527920 STAT4Q14765 748 aa33.56■■■□□ 2.96
SSSCA1-205ENST00000527920 TMEM259Q4ZIN3 620 aa33.56■■■□□ 2.96
SSSCA1-205ENST00000527920 BOLA3Q53S33 107 aa33.56■■■□□ 2.96
SSSCA1-205ENST00000527920 AFMIDQ63HM1 303 aa33.56■■■□□ 2.96
SSSCA1-205ENST00000527920 PARS2Q7L3T8 475 aaKnown RBP33.56■■■□□ 2.96
SSSCA1-205ENST00000527920 RYBPQ8N488 228 aaPredicted RBP33.56■■■□□ 2.96
SSSCA1-205ENST00000527920 OXR1Q8N573 874 aa33.56■■■□□ 2.96
SSSCA1-205ENST00000527920 SETD7Q8WTS6 366 aaKnown RBP33.56■■■□□ 2.96
SSSCA1-205ENST00000527920 CDC6Q99741 560 aa33.56■■■□□ 2.96
SSSCA1-205ENST00000527920 PDFQ9HBH1 243 aa33.56■■■□□ 2.96
SSSCA1-205ENST00000527920 FADS3Q9Y5Q0 445 aa33.56■■■□□ 2.96
SSSCA1-205ENST00000527920 KRIT1O00522 736 aa33.55■■■□□ 2.96
SSSCA1-205ENST00000527920 IGSF6O95976 241 aa33.55■■■□□ 2.96
SSSCA1-205ENST00000527920 GRK6P43250 576 aa33.55■■■□□ 2.96
SSSCA1-205ENST00000527920 FOXC1Q12948 553 aa33.55■■■□□ 2.96
SSSCA1-205ENST00000527920 DPYSL2Q16555 572 aa33.55■■■□□ 2.96
SSSCA1-205ENST00000527920 KIAA1161Q6NSJ0 714 aa33.55■■■□□ 2.96
SSSCA1-205ENST00000527920 CNTNAP3BQ96NU0 1288 aa33.55■■■□□ 2.96
SSSCA1-205ENST00000527920 DNAJC7Q99615 494 aa33.55■■■□□ 2.96
SSSCA1-205ENST00000527920 CNTNAP3Q9BZ76 1288 aa33.55■■■□□ 2.96
SSSCA1-205ENST00000527920 IP6K2Q9UHH9 426 aa33.55■■■□□ 2.96
SSSCA1-205ENST00000527920 ARHGAP42A6NI28 874 aa33.54■■■□□ 2.96
SSSCA1-205ENST00000527920 KCNK3O14649 394 aa33.54■■■□□ 2.96
SSSCA1-205ENST00000527920 DAPK3O43293 454 aa33.54■■■□□ 2.96
SSSCA1-205ENST00000527920 PRAMEF11O60813 436 aa33.54■■■□□ 2.96
SSSCA1-205ENST00000527920 PCDH8O95206 1070 aa33.54■■■□□ 2.96
SSSCA1-205ENST00000527920 ERCC2P18074 760 aa33.54■■■□□ 2.96
SSSCA1-205ENST00000527920 RHOAP61586 193 aa33.54■■■□□ 2.96
SSSCA1-205ENST00000527920 RAD51Q06609 339 aa33.54■■■□□ 2.96
SSSCA1-205ENST00000527920 NFKBIBQ15653 356 aa33.54■■■□□ 2.96
SSSCA1-205ENST00000527920 INAVAQ3KP66 663 aa33.54■■■□□ 2.96
SSSCA1-205ENST00000527920 PPP6R3Q5H9R7 873 aaPredicted RBP33.54■■■□□ 2.96
SSSCA1-205ENST00000527920 OR6K2Q8NGY2 324 aa33.54■■■□□ 2.96
SSSCA1-205ENST00000527920 ZWILCHQ9H900 591 aa33.54■■■□□ 2.96
SSSCA1-205ENST00000527920 UBA2Q9UBT2 640 aaPredicted RBP33.54■■■□□ 2.96
SSSCA1-205ENST00000527920 ZFR2Q9UPR6 939 aaKnown RBP33.54■■■□□ 2.96
SSSCA1-205ENST00000527920 C16orf96A6NNT2 1141 aa33.53■■■□□ 2.96
SSSCA1-205ENST00000527920 IL1R2P27930 398 aa33.53■■■□□ 2.96
SSSCA1-205ENST00000527920 RPS21P63220 83 aaKnown RBP33.53■■■□□ 2.96
SSSCA1-205ENST00000527920 DPYSQ14117 519 aa33.53■■■□□ 2.96
SSSCA1-205ENST00000527920 CCDC122Q5T0U0 273 aa33.53■■■□□ 2.96
SSSCA1-205ENST00000527920 ATXN7L2Q5T6C5 722 aaPredicted RBP33.53■■■□□ 2.96
SSSCA1-205ENST00000527920 OR8K1Q8NGG5 319 aa33.53■■■□□ 2.96
SSSCA1-205ENST00000527920 RHBDD1Q8TEB9 315 aa33.53■■■□□ 2.96
SSSCA1-205ENST00000527920 TEKT4Q8WW24 435 aa33.53■■■□□ 2.96
SSSCA1-205ENST00000527920 ARHGEF26Q96DR7 871 aa33.53■■■□□ 2.96
SSSCA1-205ENST00000527920 NUP85Q9BW27 656 aa33.53■■■□□ 2.96
SSSCA1-205ENST00000527920 CWC15Q9P013 229 aaKnown RBP33.53■■■□□ 2.96
SSSCA1-205ENST00000527920 HNRNPA2B1P22626 353 aaKnown RBP33.52■■■□□ 2.96
SSSCA1-205ENST00000527920 AKT2P31751 481 aa33.52■■■□□ 2.96
SSSCA1-205ENST00000527920 GKP32189 559 aa33.52■■■□□ 2.96
SSSCA1-205ENST00000527920 RXRGP48443 463 aa33.52■■■□□ 2.96
SSSCA1-205ENST00000527920 ARRB1P49407 418 aaPredicted RBP33.52■■■□□ 2.96
SSSCA1-205ENST00000527920 LZTR1Q8N653 840 aa33.52■■■□□ 2.96
SSSCA1-205ENST00000527920 CELF6Q96J87 481 aaKnown RBP33.52■■■□□ 2.96
SSSCA1-205ENST00000527920 FEM1CQ96JP0 617 aa33.52■■■□□ 2.96
SSSCA1-205ENST00000527920 CPEB1Q9BZB8 566 aaKnown RBP33.52■■■□□ 2.96
SSSCA1-205ENST00000527920 SLC39A8Q9C0K1 460 aa33.52■■■□□ 2.96
SSSCA1-205ENST00000527920 LHX3Q9UBR4 397 aa33.52■■■□□ 2.96
SSSCA1-205ENST00000527920 ANAPC7Q9UJX3 599 aa33.52■■■□□ 2.96
SSSCA1-205ENST00000527920 SLC31A1O15431 190 aa33.51■■■□□ 2.95
SSSCA1-205ENST00000527920 TSPAN6O43657 245 aa33.51■■■□□ 2.95
SSSCA1-205ENST00000527920 UGT2B4P06133 528 aa33.51■■■□□ 2.95
SSSCA1-205ENST00000527920 GDPD4Q6W3E5 623 aa33.51■■■□□ 2.95
SSSCA1-205ENST00000527920 VSTM4Q8IW00 320 aa33.51■■■□□ 2.95
SSSCA1-205ENST00000527920 ARHGAP12Q8IWW6 846 aa33.51■■■□□ 2.95
SSSCA1-205ENST00000527920 FAM174AQ8TBP5 190 aa33.51■■■□□ 2.95
SSSCA1-205ENST00000527920 DKK3Q9UBP4 350 aa33.51■■■□□ 2.95
SSSCA1-205ENST00000527920 BTBD3Q9Y2F9 522 aa33.51■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms