RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 UBE2J1Q9Y385 318 aaPredicted RBP3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 SLC30A1Q9Y6M5 507 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 AP1M2Q9Y6Q5 423 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 DISP3Q9P2K9 1392 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 RIMBP3CA6NJZ7 1639 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 RIMBP3BA6NNM3 1639 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 RIMBP3Q9UFD9 1639 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 ATAD2BQ9ULI0 1458 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 A0A1W2PRX2 142 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 UBE2QL1A1L167 161 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 LRRD1A4D1F6 860 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 PMS2P1A4D2B8 440 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 K7EPI3 171 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 SNAP23O00161 211 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 ADAMDEC1O15204 470 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 FOXN1O15353 648 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 NKX2-8O15522 239 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 PRPF4O43172 522 aaKnown RBP eCLIP3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 LIASO43766 372 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 CDC14BO60729 498 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 WDR47O94967 919 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 APBB3O95704 486 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 HEXBP07686 556 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 RPS2P15880 293 aaKnown RBP3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 CR2P20023 1033 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 TNFRSF8P28908 595 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 UQCRC1P31930 480 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 HIBADHP31937 336 aaKnown RBP3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 MC5RP33032 325 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 HNF1BP35680 557 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 GCLCP48506 637 aaPredicted RBP3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 PCP4P48539 62 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 GZMKP49863 264 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 CLRN1P58418 232 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 TUBB4BP68371 445 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 HTD2P86397 168 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 NIPAL4Q0D2K0 466 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 LRRC74AQ0VAA2 488 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 CSTF3Q12996 717 aaKnown RBP3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 CAPSQ13938 189 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 FRG1Q14331 258 aaKnown RBP3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 IL11RAQ14626 422 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 UBXN2BQ14CS0 331 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 SF3B3Q15393 1217 aaKnown RBP3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 DPCR1Q3MIW9 517 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 COLEC12Q5KU26 742 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 SH2D4BQ5SQS7 431 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 CST9LP1Q5W188 147 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 ANKS6Q68DC2 871 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 TAPT1Q6NXT6 567 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 SLC30A10Q6XR72 485 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 LINC00696Q6ZRV3 163 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 RBPMS2Q6ZRY4 209 aaKnown RBP3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 CLEC17AQ6ZS10 378 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 ERN2Q76MJ5 926 aaKnown RBP3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 SLC46A3Q7Z3Q1 461 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 RABEPKQ7Z6M1 372 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 GPR135Q8IZ08 494 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 FAM185AQ8N0U4 392 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 SIX6OS1Q8N1H7 587 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 CFAP52Q8N1V2 620 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 FITM2Q8N6M3 262 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 C11orf44Q8N8P7 122 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 CLEC4CQ8WTT0 213 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 NOC3LQ8WTT2 800 aaKnown RBP3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 RAB40AQ8WXH6 277 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 CORO2AQ92828 525 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 SYAP1Q96A49 352 aaPredicted RBP3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 CFAP57Q96MR6 1250 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 OR14A2Q96R54 314 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 HAPLN3Q96S86 360 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 MAP7D2Q96T17 732 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 SMOQ99835 787 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 TCF25Q9BQ70 676 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 HEMGNQ9BXL5 484 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 KRT23Q9C075 422 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 DNAJC18Q9H819 358 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 MRPL44Q9H9J2 332 aaKnown RBP3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 IL1RAPL2Q9NP60 686 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 PARPBPQ9NWS1 579 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 COMMD8Q9NX08 183 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 ACTR3BQ9P1U1 418 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 OSGIN1Q9UJX0 560 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 CPSF3Q9UKF6 684 aaKnown RBP3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 INTS6Q9UL03 887 aaKnown RBP3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 SLC12A4Q9UP95 1085 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 PCDHB2Q9Y5E7 798 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 RAD54BQ9Y620 910 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 UNC13AQ9UPW8 1703 aa3.98□□□□□ -1.77
CLNS1A-208ENST00000527265 SPAG9O60271 1321 aaKnown RBP3.97□□□□□ -1.77
CLNS1A-208ENST00000527265 PAPSS1O43252 624 aaPredicted RBP3.97□□□□□ -1.77
CLNS1A-208ENST00000527265 SMPD2O60906 423 aa3.97□□□□□ -1.77
CLNS1A-208ENST00000527265 TACC1O75410 805 aa3.97□□□□□ -1.77
CLNS1A-208ENST00000527265 TADA2AO75478 443 aa3.97□□□□□ -1.77
CLNS1A-208ENST00000527265 BCAS2O75934 225 aaPredicted RBP3.97□□□□□ -1.77
CLNS1A-208ENST00000527265 STC2O76061 302 aa3.97□□□□□ -1.77
CLNS1A-208ENST00000527265 SLCO2B1O94956 709 aa3.97□□□□□ -1.77
CLNS1A-208ENST00000527265 SEC31AO94979 1220 aaKnown RBP3.97□□□□□ -1.77
CLNS1A-208ENST00000527265 DDAH2O95865 285 aa3.97□□□□□ -1.77
CLNS1A-208ENST00000527265 ITGB1P05556 798 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms