RNA–Protein interactions for RNA: ENST00000525378.5

NDUFS3-204, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 779 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-204ENST00000525378 BAP1Q92560 729 aa11.94□□□□□ -0.5
NDUFS3-204ENST00000525378 FCRL3Q96P31 734 aaPredicted RBP11.94□□□□□ -0.5
NDUFS3-204ENST00000525378 KLF6Q99612 283 aaPredicted RBP11.94□□□□□ -0.5
NDUFS3-204ENST00000525378 OSBPL2Q9H1P3 480 aa11.94□□□□□ -0.5
NDUFS3-204ENST00000525378 GANQ9H2C0 597 aa11.94□□□□□ -0.5
NDUFS3-204ENST00000525378 TAB2Q9NYJ8 693 aa11.94□□□□□ -0.5
NDUFS3-204ENST00000525378 HECAQ9UBI9 543 aaPredicted RBP11.94□□□□□ -0.5
NDUFS3-204ENST00000525378 OR12D3Q9UGF7 316 aa11.94□□□□□ -0.5
NDUFS3-204ENST00000525378 DNAI1Q9UI46 699 aa11.94□□□□□ -0.5
NDUFS3-204ENST00000525378 NOCTQ9UK39 431 aaKnown RBP11.94□□□□□ -0.5
NDUFS3-204ENST00000525378 NEU3Q9UQ49 428 aa11.94□□□□□ -0.5
NDUFS3-204ENST00000525378 ITM2BQ9Y287 266 aa11.94□□□□□ -0.5
NDUFS3-204ENST00000525378 BPTFQ12830 3046 aa11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 SPTY2D1-AS1A0A0U1RR47 76 aa11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 NEMP2A6NFY4 417 aa11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 IGLON5A6NGN9 336 aa11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 C16orf96A6NNT2 1141 aa11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 C1QL1O75973 258 aa11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 GFPT2O94808 682 aa11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 CSF2P04141 144 aa11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 MPOP05164 745 aa11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 ALPPL2P10696 532 aa11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 CHRNB2P17787 502 aa11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 ADRA1BP35368 520 aa11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 HNRNPKP61978 463 aaKnown RBP eCLIP11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 FMO1Q01740 532 aa11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 NRG1Q02297 640 aaPredicted RBP11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 PDE1CQ14123 709 aaPredicted RBP11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 TCP11X2Q5H9J9 407 aa11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 LEKR1Q6ZMV7 388 aa11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 DCP2Q8IU60 420 aaKnown RBP11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 SPACA3Q8IXA5 215 aa11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 RYBPQ8N488 228 aaPredicted RBP11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 FAM181AQ8N9Y4 354 aa11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 MSANTD4Q8NCY6 345 aa11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 ZNF548Q8NEK5 533 aaPredicted RBP11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 SLC30A5Q8TAD4 765 aa11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 GPT2Q8TD30 523 aa11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 SLC39A7Q92504 469 aa11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 ARHGEF2Q92974 986 aaKnown RBP11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 ISG20Q96AZ6 181 aaKnown RBP11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 NAF1Q96HR8 494 aaKnown RBP11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 LENG8Q96PV6 779 aaPredicted RBP11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 C11orf70Q9BRQ4 267 aa11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 C1QTNF2Q9BXJ5 285 aa11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 TMEM248Q9NWD8 314 aa11.93□□□□□ -0.5
NDUFS3-204ENST00000525378 ITPR1Q14643 2758 aa11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 C2CD4BA6NLJ0 364 aa11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 EPHB6O15197 1021 aa11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 ATXN7O15265 892 aaPredicted RBP11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 USP12O75317 370 aa11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 CSO75390 466 aaKnown RBP11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 LRIG2O94898 1065 aa11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 UGT2B4P06133 528 aa11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 NME1P15531 152 aaKnown RBP11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 RHOQP17081 205 aa11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 TGM2P21980 687 aa11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 MMP8P22894 467 aa11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 RABIFP47224 123 aa11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 MAPKAPK2P49137 400 aa11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 PFN3P60673 137 aa11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 CDR2Q01850 454 aa11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 TLE3Q04726 772 aa11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 EIF2B5Q13144 721 aaKnown RBP11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 ARL13BQ3SXY8 428 aa11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 ZNF805Q5CZA5 627 aa11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 LRRC73Q5JTD7 316 aa11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 ATXN7L2Q5T6C5 722 aaPredicted RBP11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 RWDD4Q6NW29 188 aaKnown RBP11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 PARGQ86W56 976 aa11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 ZNF677Q86XU0 584 aa11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 PLPP6Q8IY26 295 aa11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 CCDC185Q8N715 623 aa11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 NETO2Q8NC67 525 aa11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 OR2AP1Q8NGE2 309 aa11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 IFI44Q8TCB0 444 aa11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 KLHL32Q96NJ5 620 aa11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 DEPDC7Q96QD5 511 aa11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 DUSP23Q9BVJ7 150 aa11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 VPS16Q9H269 839 aa11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 TCEAL2Q9H3H9 227 aaPredicted RBP11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 PNMA8BQ9ULN7 279 aaPredicted RBP11.92□□□□□ -0.5
NDUFS3-204ENST00000525378 CXorf51AA0A1B0GTR3 108 aa11.91□□□□□ -0.5
NDUFS3-204ENST00000525378 H3BM21 787 aa11.91□□□□□ -0.5
NDUFS3-204ENST00000525378 KRIT1O00522 736 aa11.91□□□□□ -0.5
NDUFS3-204ENST00000525378 FPGTO14772 594 aa11.91□□□□□ -0.5
NDUFS3-204ENST00000525378 AQP9O43315 295 aa11.91□□□□□ -0.5
NDUFS3-204ENST00000525378 TSPAN6O43657 245 aa11.91□□□□□ -0.5
NDUFS3-204ENST00000525378 GSRP00390 522 aa11.91□□□□□ -0.5
NDUFS3-204ENST00000525378 GP1BAP07359 652 aa11.91□□□□□ -0.5
NDUFS3-204ENST00000525378 JUNDP17535 347 aa11.91□□□□□ -0.5
NDUFS3-204ENST00000525378 ITIH2P19823 946 aa11.91□□□□□ -0.5
NDUFS3-204ENST00000525378 EEF1GP26641 437 aaKnown RBP11.91□□□□□ -0.5
NDUFS3-204ENST00000525378 SDC4P31431 198 aa11.91□□□□□ -0.5
NDUFS3-204ENST00000525378 ETFBP38117 255 aa11.91□□□□□ -0.5
NDUFS3-204ENST00000525378 PTPN9P43378 593 aa11.91□□□□□ -0.5
NDUFS3-204ENST00000525378 DUSP3P51452 185 aaPredicted RBP11.91□□□□□ -0.5
NDUFS3-204ENST00000525378 HDAC4P56524 1084 aa11.91□□□□□ -0.5
NDUFS3-204ENST00000525378 JAM2P57087 298 aa11.91□□□□□ -0.5
NDUFS3-204ENST00000525378 POLR2FP61218 127 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms