RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 PIGNO95427 931 aa13.81□□□□□ -0.2
LRRK1-202ENST00000525284 CKBP12277 381 aa13.81□□□□□ -0.2
LRRK1-202ENST00000525284 ITGA2P17301 1181 aa13.81□□□□□ -0.2
LRRK1-202ENST00000525284 CRY1Q16526 586 aa13.81□□□□□ -0.2
LRRK1-202ENST00000525284 ZNF567Q8N184 647 aa13.81□□□□□ -0.2
LRRK1-202ENST00000525284 ATXN2LQ8WWM7 1075 aaKnown RBP13.81□□□□□ -0.2
LRRK1-202ENST00000525284 SELENOMQ8WWX9 145 aa13.81□□□□□ -0.2
LRRK1-202ENST00000525284 APBB2Q92870 758 aa13.81□□□□□ -0.2
LRRK1-202ENST00000525284 EXOC2Q96KP1 924 aa13.81□□□□□ -0.2
LRRK1-202ENST00000525284 SOHLH2Q9NX45 425 aa13.81□□□□□ -0.2
LRRK1-202ENST00000525284 MYL4P12829 197 aa13.81□□□□□ -0.2
LRRK1-202ENST00000525284 MSR1P21757 451 aa13.81□□□□□ -0.2
LRRK1-202ENST00000525284 UBA1P22314 1058 aaKnown RBP13.81□□□□□ -0.2
LRRK1-202ENST00000525284 BUD31P41223 144 aaPredicted RBP13.81□□□□□ -0.2
LRRK1-202ENST00000525284 PRKAA2P54646 552 aa13.81□□□□□ -0.2
LRRK1-202ENST00000525284 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.81□□□□□ -0.2
LRRK1-202ENST00000525284 SNAP23O00161 211 aa13.81□□□□□ -0.2
LRRK1-202ENST00000525284 TLX1P31314 330 aaPredicted RBP13.81□□□□□ -0.2
LRRK1-202ENST00000525284 SDC2P34741 201 aa13.81□□□□□ -0.2
LRRK1-202ENST00000525284 NET1Q7Z628 596 aaPredicted RBP13.81□□□□□ -0.2
LRRK1-202ENST00000525284 SPAG16Q8N0X2 631 aa13.81□□□□□ -0.2
LRRK1-202ENST00000525284 ATXN3LQ9H3M9 355 aa13.81□□□□□ -0.2
LRRK1-202ENST00000525284 PRMT7Q9NVM4 692 aaPredicted RBP13.81□□□□□ -0.2
LRRK1-202ENST00000525284 SAE1Q9UBE0 346 aaPredicted RBP13.81□□□□□ -0.2
LRRK1-202ENST00000525284 CNOT7Q9UIV1 285 aaKnown RBP13.81□□□□□ -0.2
LRRK1-202ENST00000525284 TRIM38O00635 465 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 AXIN1O15169 862 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 VIL1P09327 827 aaKnown RBP13.8□□□□□ -0.2
LRRK1-202ENST00000525284 ECHS1P30084 290 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 AKT2P31751 481 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 SPDYCQ5MJ68 293 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 C16orf46Q6P387 395 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 ZNF549Q6P9A3 640 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 CHRDL2Q6WN34 429 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 SLC4A11Q8NBS3 891 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 OR52K2Q8NGK3 314 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 HASPINQ8TF76 798 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 RXFP2Q8WXD0 754 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 SYN2Q92777 582 aaPredicted RBP13.8□□□□□ -0.2
LRRK1-202ENST00000525284 CRELD1Q96HD1 420 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 SYT15Q9BQS2 421 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 RUSC1Q9BVN2 902 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 CDHR5Q9HBB8 845 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 PNPLA3Q9NST1 481 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 IGSF9BQ9UPX0 1349 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 METTL21EPA6NDL7 271 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 NARSO43776 548 aaKnown RBP13.8□□□□□ -0.2
LRRK1-202ENST00000525284 PEX11AO75192 247 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 F9P00740 461 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 PGAM1P18669 254 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 RPL14P50914 215 aaKnown RBP13.8□□□□□ -0.2
LRRK1-202ENST00000525284 MARC1Q5VT66 337 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 ANKFN1Q8N957 763 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 PNMA5Q96PV4 448 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 COLEC11Q9BWP8 271 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 XKR8Q9H6D3 395 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 ELP3Q9H9T3 547 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 RNPEPL1Q9HAU8 725 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 SAR1AQ9NR31 198 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 IKZF2Q9UKS7 526 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 SERPINF2P08697 491 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 SSTR1P30872 391 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 PCDH1Q08174 1060 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 TOR1AIP1Q5JTV8 583 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 TUBA3EQ6PEY2 450 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 CIR1Q86X95 450 aaPredicted RBP13.8□□□□□ -0.2
LRRK1-202ENST00000525284 OR10H5Q8NGA6 315 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 CLK4Q9HAZ1 481 aaKnown RBP13.8□□□□□ -0.2
LRRK1-202ENST00000525284 SUCOQ9UBS9 1254 aaKnown RBP13.8□□□□□ -0.2
LRRK1-202ENST00000525284 EME2A4GXA9 379 aaPredicted RBP13.8□□□□□ -0.2
LRRK1-202ENST00000525284 GMFGO60234 142 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 SKP1P63208 163 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 MCL1Q07820 350 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 CDH17Q12864 832 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 FAAH2Q6GMR7 532 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 HMBOX1Q6NT76 420 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 ASB12Q8WXK4 309 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 DPF3Q92784 378 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 MASTLQ96GX5 879 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 SPATA5L1Q9BVQ7 753 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 OR2AT4A6NND4 320 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 H7C4K7 107 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 B3GAT3O94766 335 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 EGFRP00533 1210 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 ANPEPP15144 967 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 MARSP56192 900 aaKnown RBP13.8□□□□□ -0.2
LRRK1-202ENST00000525284 PTGES3Q15185 160 aaKnown RBP13.8□□□□□ -0.2
LRRK1-202ENST00000525284 MTMR12Q9C0I1 747 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 LMAN2LQ9H0V9 348 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 AP3M1Q9Y2T2 418 aa13.8□□□□□ -0.2
LRRK1-202ENST00000525284 SHROOM2Q13796 1616 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 CYP1A1P04798 512 aaPredicted RBP13.79□□□□□ -0.2
LRRK1-202ENST00000525284 FAM153BP0C7A2 387 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 FAM228BP0C875 321 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 IFI35P80217 286 aaPredicted RBP13.79□□□□□ -0.2
LRRK1-202ENST00000525284 SPANXN3Q5MJ09 141 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 LCN1P1Q5VSP4 162 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 ZFP14Q9HCL3 533 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 GRHL1Q9NZI5 618 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 CYB561D2O14569 222 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms