RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 SNX21Q969T3 373 aa8.09□□□□□ -1.11
NSMCE2-213ENST00000523824 LIN37Q96GY3 246 aaPredicted RBP8.09□□□□□ -1.11
NSMCE2-213ENST00000523824 KREMEN1Q96MU8 473 aa8.09□□□□□ -1.11
NSMCE2-213ENST00000523824 SLC2A13Q96QE2 648 aa8.09□□□□□ -1.11
NSMCE2-213ENST00000523824 GFM1Q96RP9 751 aaKnown RBP8.09□□□□□ -1.11
NSMCE2-213ENST00000523824 PSMB7Q99436 277 aa8.09□□□□□ -1.11
NSMCE2-213ENST00000523824 HEPHQ9BQS7 1158 aa8.09□□□□□ -1.11
NSMCE2-213ENST00000523824 SPON2Q9BUD6 331 aa8.09□□□□□ -1.11
NSMCE2-213ENST00000523824 GTPBP4Q9BZE4 634 aaKnown RBP8.09□□□□□ -1.11
NSMCE2-213ENST00000523824 SLC13A1Q9BZW2 595 aa8.09□□□□□ -1.11
NSMCE2-213ENST00000523824 TCEAL2Q9H3H9 227 aaPredicted RBP8.09□□□□□ -1.11
NSMCE2-213ENST00000523824 SEPT3Q9UH03 358 aa8.09□□□□□ -1.11
NSMCE2-213ENST00000523824 APOBEC3BQ9UH17 382 aaKnown RBP8.09□□□□□ -1.11
NSMCE2-213ENST00000523824 DOLKQ9UPQ8 538 aa8.09□□□□□ -1.11
NSMCE2-213ENST00000523824 PCDHGA7Q9Y5G6 932 aa8.09□□□□□ -1.11
NSMCE2-213ENST00000523824 WASF2Q9Y6W5 498 aa8.09□□□□□ -1.11
NSMCE2-213ENST00000523824 A0A0D9SEW6 157 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 A0A1W2PQ27 194 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 A0A1W2PQ64 194 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 M0QYT0 321 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 NTN3O00634 580 aaPredicted RBP8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 YY2O15391 372 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 TSPAN6O43657 245 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 NOBOXO60393 691 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 SMC2O95347 1197 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 NTRK1P04629 796 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 FAM87AP0C7U9 286 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 JMJD7P0C870 316 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 HGFP14210 728 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 TSHRP16473 764 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 ITGB7P26010 798 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 OR1E1P30953 314 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 NOS2P35228 1153 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 PDX1P52945 283 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 PFN3P60673 137 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 SLC20A2Q08357 652 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 PDCLQ13371 301 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 STIM1Q13586 685 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 TGIF1Q15583 401 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 ALFQ53S48 1182 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 COBLL1Q53SF7 1204 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 MANEAQ5SRI9 462 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 TPRG1LQ5T0D9 272 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 RETSATQ6NUM9 610 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 C11orf57Q6ZUT1 292 aaPredicted RBP8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 TFAP2DQ7Z6R9 452 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 SETD3Q86TU7 594 aaPredicted RBP8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 PHACTR4Q8IZ21 702 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 DCAF4L2Q8NA75 395 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 DENND6BQ8NEG7 585 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 OR7D4Q8NG98 312 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 SCG3Q8WXD2 468 aaKnown RBP8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 ASB12Q8WXK4 309 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 PPP1R13BQ96KQ4 1090 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 CEP63Q96MT8 703 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 KLF6Q99612 283 aaPredicted RBP8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 SEMA3CQ99985 751 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 C1QTNF2Q9BXJ5 285 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 FOXP3Q9BZS1 431 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 CEP44Q9C0F1 390 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 TKTL2Q9H0I9 626 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 GOLPH3LQ9H4A5 285 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 ZDHHC6Q9H6R6 413 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 WDCPQ9H6R7 721 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 UBE2TQ9NPD8 197 aaPredicted RBP8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 ASNSD1Q9NWL6 643 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 SEPT10Q9P0V9 454 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 CNTN6Q9UQ52 1028 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 PCDHB11Q9Y5F2 797 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 BOD1L1Q8NFC6 3051 aa8.08□□□□□ -1.12
NSMCE2-213ENST00000523824 TLN1Q9Y490 2541 aaKnown RBP8.07□□□□□ -1.12
NSMCE2-213ENST00000523824 COL12A1Q99715 3063 aa8.07□□□□□ -1.12
NSMCE2-213ENST00000523824 DRGXA6NNA5 263 aa8.07□□□□□ -1.12
NSMCE2-213ENST00000523824 C16orf96A6NNT2 1141 aa8.07□□□□□ -1.12
NSMCE2-213ENST00000523824 NVLO15381 856 aaKnown RBP8.07□□□□□ -1.12
NSMCE2-213ENST00000523824 SRGAP2O75044 1071 aa8.07□□□□□ -1.12
NSMCE2-213ENST00000523824 PPFIA2O75334 1257 aa8.07□□□□□ -1.12
NSMCE2-213ENST00000523824 ZNF821O75541 412 aaPredicted RBP8.07□□□□□ -1.12
NSMCE2-213ENST00000523824 AFPP02771 609 aaKnown RBP8.07□□□□□ -1.12
NSMCE2-213ENST00000523824 LIPCP11150 499 aa8.07□□□□□ -1.12
NSMCE2-213ENST00000523824 CTSEP14091 401 aa8.07□□□□□ -1.12
NSMCE2-213ENST00000523824 ITGB6P18564 788 aa8.07□□□□□ -1.12
NSMCE2-213ENST00000523824 USP8P40818 1118 aa8.07□□□□□ -1.12
NSMCE2-213ENST00000523824 SERPINH1P50454 418 aaKnown RBP8.07□□□□□ -1.12
NSMCE2-213ENST00000523824 BLKP51451 505 aa8.07□□□□□ -1.12
NSMCE2-213ENST00000523824 CCNHP51946 323 aaPredicted RBP8.07□□□□□ -1.12
NSMCE2-213ENST00000523824 SNX16P57768 344 aa8.07□□□□□ -1.12
NSMCE2-213ENST00000523824 YPEL5P62699 121 aa8.07□□□□□ -1.12
NSMCE2-213ENST00000523824 CCL7P80098 99 aa8.07□□□□□ -1.12
NSMCE2-213ENST00000523824 PPARDQ03181 441 aa8.07□□□□□ -1.12
NSMCE2-213ENST00000523824 SRSF6Q13247 344 aaKnown RBP8.07□□□□□ -1.12
NSMCE2-213ENST00000523824 TBR1Q16650 682 aa8.07□□□□□ -1.12
NSMCE2-213ENST00000523824 BRMS1LQ5PSV4 323 aa8.07□□□□□ -1.12
NSMCE2-213ENST00000523824 FAM183BPQ6ZVS7 135 aa8.07□□□□□ -1.12
NSMCE2-213ENST00000523824 PARS2Q7L3T8 475 aaKnown RBP8.07□□□□□ -1.12
NSMCE2-213ENST00000523824 B3GNT8Q7Z7M8 397 aa8.07□□□□□ -1.12
NSMCE2-213ENST00000523824 VPS36Q86VN1 386 aa8.07□□□□□ -1.12
NSMCE2-213ENST00000523824 RYBPQ8N488 228 aaPredicted RBP8.07□□□□□ -1.12
NSMCE2-213ENST00000523824 PCDH20Q8N6Y1 951 aaKnown RBP8.07□□□□□ -1.12
NSMCE2-213ENST00000523824 RAB7BQ96AH8 199 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms