RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 IRF9Q00978 393 aa5.39□□□□□ -1.55
PABPC1-223ENST00000523636 LRRC74AQ0VAA2 488 aa5.39□□□□□ -1.55
PABPC1-223ENST00000523636 KLF1Q13351 362 aaPredicted RBP5.39□□□□□ -1.55
PABPC1-223ENST00000523636 SEMA5AQ13591 1074 aa5.39□□□□□ -1.55
PABPC1-223ENST00000523636 MUM1Q2TAK8 710 aa5.39□□□□□ -1.55
PABPC1-223ENST00000523636 CCDC157Q569K6 752 aa5.39□□□□□ -1.55
PABPC1-223ENST00000523636 LIN9Q5TKA1 542 aa5.39□□□□□ -1.55
PABPC1-223ENST00000523636 CREB3L3Q68CJ9 461 aa5.39□□□□□ -1.55
PABPC1-223ENST00000523636 SLC30A6Q6NXT4 461 aa5.39□□□□□ -1.55
PABPC1-223ENST00000523636 FUT10Q6P4F1 479 aa5.39□□□□□ -1.55
PABPC1-223ENST00000523636 FIP1L1Q6UN15 594 aaKnown RBP5.39□□□□□ -1.55
PABPC1-223ENST00000523636 GLB1LQ6UWU2 654 aa5.39□□□□□ -1.55
PABPC1-223ENST00000523636 TMC6Q7Z403 805 aa5.39□□□□□ -1.55
PABPC1-223ENST00000523636 ANKRD52Q8NB46 1076 aa5.39□□□□□ -1.55
PABPC1-223ENST00000523636 ZNF606Q8WXB4 792 aa5.39□□□□□ -1.55
PABPC1-223ENST00000523636 RABGGTAQ92696 567 aa5.39□□□□□ -1.55
PABPC1-223ENST00000523636 FAXDC2Q96IV6 333 aa5.39□□□□□ -1.55
PABPC1-223ENST00000523636 CD244Q9BZW8 370 aa5.39□□□□□ -1.55
PABPC1-223ENST00000523636 EPB41L4BQ9H329 900 aa5.39□□□□□ -1.55
PABPC1-223ENST00000523636 FAM204AQ9H8W3 233 aa5.39□□□□□ -1.55
PABPC1-223ENST00000523636 HPS4Q9NQG7 708 aa5.39□□□□□ -1.55
PABPC1-223ENST00000523636 KCNH7Q9NS40 1196 aa5.39□□□□□ -1.55
PABPC1-223ENST00000523636 DACT1Q9NYF0 836 aa5.39□□□□□ -1.55
PABPC1-223ENST00000523636 DTLQ9NZJ0 730 aa5.39□□□□□ -1.55
PABPC1-223ENST00000523636 CGNQ9P2M7 1197 aaKnown RBP5.39□□□□□ -1.55
PABPC1-223ENST00000523636 CACNG4Q9UBN1 327 aa5.39□□□□□ -1.55
PABPC1-223ENST00000523636 EIF2B4Q9UI10 523 aaKnown RBP5.39□□□□□ -1.55
PABPC1-223ENST00000523636 ITM2BQ9Y287 266 aa5.39□□□□□ -1.55
PABPC1-223ENST00000523636 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.39□□□□□ -1.55
PABPC1-223ENST00000523636 DENND4CQ5VZ89 1909 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 MEGF8Q7Z7M0 2845 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 SHANK1Q9Y566 2161 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 KLK10O43240 276 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 PCDHGA12O60330 932 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 ZNF623O75123 536 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 SEMA7AO75326 666 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 FKBP9O95302 570 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 TGDSO95455 350 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 POLBP06746 335 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 THEGLP0DJG4 465 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 NEFHP12036 1026 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 RPS2P15880 293 aaKnown RBP5.38□□□□□ -1.55
PABPC1-223ENST00000523636 PTPN1P18031 435 aaKnown RBP5.38□□□□□ -1.55
PABPC1-223ENST00000523636 CNTFP26441 200 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 SDHAP31040 664 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 OR1G1P47890 313 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 PRIM2P49643 509 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 CLCN3P51790 818 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 NLRP11P59045 1033 aaKnown RBP5.38□□□□□ -1.55
PABPC1-223ENST00000523636 SRSF3P84103 164 aaKnown RBP5.38□□□□□ -1.55
PABPC1-223ENST00000523636 UBXN1Q04323 297 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 EIF2B5Q13144 721 aaKnown RBP5.38□□□□□ -1.55
PABPC1-223ENST00000523636 SEMA3AQ14563 771 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 UBE3CQ15386 1083 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 TARBP2Q15633 366 aaKnown RBP5.38□□□□□ -1.55
PABPC1-223ENST00000523636 ZNF174Q15697 407 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 ANO4Q32M45 955 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 USP41Q3LFD5 358 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 VWA3BQ502W6 1294 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 SPDYCQ5MJ68 293 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 STXBP5Q5T5C0 1151 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 BTBD8Q5XKL5 378 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 CEP85Q6P2H3 762 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 CRTC1Q6UUV9 634 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 ETV3LQ6ZN32 361 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 FKBP9P1Q75LS8 142 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 OVCH2Q7RTZ1 564 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 DNAJB7Q7Z6W7 309 aaPredicted RBP5.38□□□□□ -1.55
PABPC1-223ENST00000523636 ADGRF4Q8IZF3 695 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 NXPE1Q8N323 547 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 TSTD1Q8NFU3 115 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 PPP1R14CQ8TAE6 165 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 BRSK1Q8TDC3 778 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 UCMAQ8WVF2 138 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 ASB12Q8WXK4 309 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 ZNF75CPQ92670 426 aaPredicted RBP5.38□□□□□ -1.55
PABPC1-223ENST00000523636 ALG3Q92685 438 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 EXTL1Q92935 676 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 TOE1Q96GM8 510 aaKnown RBP5.38□□□□□ -1.55
PABPC1-223ENST00000523636 ACO2Q99798 780 aaKnown RBP5.38□□□□□ -1.55
PABPC1-223ENST00000523636 SEMA3CQ99985 751 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 C7orf25Q9BPX7 421 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 TTPALQ9BTX7 342 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 TXLNGYQ9BZA5 131 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 KCTD10Q9H3F6 313 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 GRPEL1Q9HAV7 217 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 PCDH18Q9HCL0 1135 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 WASH6PQ9NQA3 447 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 ACSS2Q9NR19 701 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 OXSMQ9NWU1 459 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 C6orf203Q9P0P8 240 aaPredicted RBP5.38□□□□□ -1.55
PABPC1-223ENST00000523636 AASSQ9UDR5 926 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 MRPL11Q9Y3B7 192 aaKnown RBP5.38□□□□□ -1.55
PABPC1-223ENST00000523636 PCDHGA9Q9Y5G4 932 aaKnown RBP5.38□□□□□ -1.55
PABPC1-223ENST00000523636 PCDHGA8Q9Y5G5 932 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 PCDHGA7Q9Y5G6 932 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 PCDHGA6Q9Y5G7 932 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 PCDHGA3Q9Y5H0 932 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 SPO11Q9Y5K1 396 aa5.38□□□□□ -1.55
PABPC1-223ENST00000523636 WNT6Q9Y6F9 365 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms