RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 TEFMQ96QE5 360 aaKnown RBP4.99□□□□□ -1.61
HMGB1P1-201ENST00000522557 CCDC68Q9H2F9 335 aa4.99□□□□□ -1.61
HMGB1P1-201ENST00000522557 PLEKHA4Q9H4M7 779 aa4.99□□□□□ -1.61
HMGB1P1-201ENST00000522557 VEZTQ9HBM0 779 aa4.99□□□□□ -1.61
HMGB1P1-201ENST00000522557 PCDHB16Q9NRJ7 776 aa4.99□□□□□ -1.61
HMGB1P1-201ENST00000522557 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.99□□□□□ -1.61
HMGB1P1-201ENST00000522557 KIAA1456Q9P272 454 aa4.99□□□□□ -1.61
HMGB1P1-201ENST00000522557 ABI3Q9P2A4 366 aa4.99□□□□□ -1.61
HMGB1P1-201ENST00000522557 PEMTQ9UBM1 199 aa4.99□□□□□ -1.61
HMGB1P1-201ENST00000522557 SLC25A13Q9UJS0 675 aa4.99□□□□□ -1.61
HMGB1P1-201ENST00000522557 FBXO4Q9UKT5 387 aa4.99□□□□□ -1.61
HMGB1P1-201ENST00000522557 TCRBV7S3A2A0A539 114 aa4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 TMEM247A6NEH6 219 aa4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 GTPBP1O00178 669 aaKnown RBP4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 CEP104O60308 925 aa4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 TACC1O75410 805 aa4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 GJB3O75712 270 aa4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 NEURL1O76050 574 aa4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 PLAUP00749 431 aa4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 FCGR2AP12318 317 aa4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 PORP16435 677 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 IL11P20809 199 aa4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 MMP13P45452 471 aa4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 NLRP5P59047 1200 aa4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 CYP4A11Q02928 519 aa4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 CREB5Q02930 508 aa4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 MAMLD1Q13495 774 aa4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 RABEP1Q15276 862 aa4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 TRIP6Q15654 476 aaKnown RBP4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 CDC73Q6P1J9 531 aa4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 SZRD1Q7Z422 152 aa4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 CPLX4Q7Z7G2 160 aa4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 SAAL1Q96ER3 474 aa4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 KLHL15Q96M94 604 aa4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 ZNF48Q96MX3 618 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 MAP7D2Q96T17 732 aa4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 FAM118BQ9BPY3 351 aa4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 PIMREGQ9BSJ6 248 aa4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 KRTAP9-8Q9BYQ0 159 aa4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 CXorf56Q9H5V9 222 aa4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 DIAPH3Q9NSV4 1193 aa4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 SEPT11Q9NVA2 429 aaKnown RBP4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 HCFC1R1Q9NWW0 138 aa4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 ELOVL5Q9NYP7 299 aa4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 INTS6Q9UL03 887 aaKnown RBP4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 TTLL3Q9Y4R7 772 aa4.98□□□□□ -1.61
HMGB1P1-201ENST00000522557 TRBV5-7A0A0A0MS05 114 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 SLC22A23A1A5C7 686 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 E5RJQ4 531 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 PPEF2O14830 753 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 USP12O75317 370 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 GALTP07902 379 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 ST6GAL1P15907 406 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 HOXD9P28356 352 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 ACSL1P33121 698 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 PBX3P40426 434 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 CENPAP49450 140 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 RARSP54136 660 aaKnown RBP4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 OLR1P78380 273 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 SLC18A2Q05940 514 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 TMEM115Q12893 351 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 ME3Q16798 604 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 ALG11Q2TAA5 492 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 C5orf22Q49AR2 442 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 FAM171A1Q5VUB5 890 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 CYP20A1Q6UW02 462 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 DHRS13Q6UX07 377 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 CCDC129Q6ZRS4 1044 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 ENOSF1Q7L5Y1 443 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 PRSS45Q7RTY3 260 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 UBE2Q1Q7Z7E8 422 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 CNTROBQ8N137 903 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 FAM47BQ8NA70 645 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 TMEM116Q8NCL8 245 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 PRSS3P2Q8NHM4 247 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 OSR1Q8TAX0 266 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 BCAS4Q8TDM0 211 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 HSPH1Q92598 858 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 MAP4K1Q92918 833 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 CUL5Q93034 780 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 INTS12Q96CB8 462 aaKnown RBP4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 FAM120BQ96EK7 910 aaKnown RBP4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 SDF4Q9BRK5 362 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 HEMGNQ9BXL5 484 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 PDCL3Q9H2J4 239 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 SLC32A1Q9H598 525 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 TUBA8Q9NY65 449 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 NKIRAS2Q9NYR9 191 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 LYVE1Q9Y5Y7 322 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 KCNE2Q9Y6J6 123 aa4.97□□□□□ -1.61
HMGB1P1-201ENST00000522557 TEX13CA0A0J9YWL9 993 aa4.96□□□□□ -1.62
HMGB1P1-201ENST00000522557 TARSL2A2RTX5 802 aaKnown RBP4.96□□□□□ -1.62
HMGB1P1-201ENST00000522557 CXorf65A6NEN9 183 aa4.96□□□□□ -1.62
HMGB1P1-201ENST00000522557 EBAG9O00559 213 aa4.96□□□□□ -1.62
HMGB1P1-201ENST00000522557 ADAM10O14672 748 aa4.96□□□□□ -1.62
HMGB1P1-201ENST00000522557 BCAT2O15382 392 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P1-201ENST00000522557 PLOD3O60568 738 aa4.96□□□□□ -1.62
HMGB1P1-201ENST00000522557 NR2F1P10589 423 aa4.96□□□□□ -1.62
HMGB1P1-201ENST00000522557 ZNF8P17098 575 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P1-201ENST00000522557 RYKP34925 604 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms