RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 DENND5AQ6IQ26 1287 aa10.09□□□□□ -0.79
SPARC-202ENST00000520687 FSTL4Q6MZW2 842 aa10.09□□□□□ -0.79
SPARC-202ENST00000520687 C14orf80Q86SX3 495 aa10.09□□□□□ -0.79
SPARC-202ENST00000520687 CLEC14AQ86T13 490 aa10.09□□□□□ -0.79
SPARC-202ENST00000520687 MTDHQ86UE4 582 aaKnown RBP10.09□□□□□ -0.79
SPARC-202ENST00000520687 GPR65Q8IYL9 337 aa10.09□□□□□ -0.79
SPARC-202ENST00000520687 ARHGAP24Q8N264 748 aa10.09□□□□□ -0.79
SPARC-202ENST00000520687 RFWD2Q8NHY2 731 aa10.09□□□□□ -0.79
SPARC-202ENST00000520687 SCG3Q8WXD2 468 aaKnown RBP10.09□□□□□ -0.79
SPARC-202ENST00000520687 SKA1Q96BD8 255 aa10.09□□□□□ -0.79
SPARC-202ENST00000520687 DDX50Q9BQ39 737 aaKnown RBP10.09□□□□□ -0.79
SPARC-202ENST00000520687 TRIM56Q9BRZ2 755 aaKnown RBP10.09□□□□□ -0.79
SPARC-202ENST00000520687 FICDQ9BVA6 458 aa10.09□□□□□ -0.79
SPARC-202ENST00000520687 TMEM120AQ9BXJ8 343 aa10.09□□□□□ -0.79
SPARC-202ENST00000520687 KCNK13Q9HB14 408 aa10.09□□□□□ -0.79
SPARC-202ENST00000520687 ATP13A1Q9HD20 1204 aa10.09□□□□□ -0.79
SPARC-202ENST00000520687 ALG13Q9NP73 1137 aaKnown RBP10.09□□□□□ -0.79
SPARC-202ENST00000520687 CHRAC1Q9NRG0 131 aa10.09□□□□□ -0.79
SPARC-202ENST00000520687 MTRRQ9UBK8 725 aa10.09□□□□□ -0.79
SPARC-202ENST00000520687 STK39Q9UEW8 545 aa10.09□□□□□ -0.79
SPARC-202ENST00000520687 MCM8Q9UJA3 840 aa10.09□□□□□ -0.79
SPARC-202ENST00000520687 DCTN4Q9UJW0 460 aa10.09□□□□□ -0.79
SPARC-202ENST00000520687 RIMKLBQ9ULI2 386 aa10.09□□□□□ -0.79
SPARC-202ENST00000520687 APOBEC2Q9Y235 224 aaKnown RBP10.09□□□□□ -0.79
SPARC-202ENST00000520687 PSAT1Q9Y617 370 aa10.09□□□□□ -0.79
SPARC-202ENST00000520687 ZDBF2Q9HCK1 2354 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 PTPRDP23468 1912 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 NLRC5Q86WI3 1866 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 A0A096LPK6 155 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 SLC12A8A0AV02 714 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 SLC38A8A6NNN8 435 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 TBKBP1A7MCY6 615 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 TLL1O43897 1013 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 RAMP2O60895 175 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 EFEMP2O95967 443 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 PEX11BO96011 259 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 HLA-DQB2P05538 268 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 MYL2P10916 166 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 ATP5C1P36542 298 aaKnown RBP10.08□□□□□ -0.8
SPARC-202ENST00000520687 HARS2P49590 506 aaKnown RBP10.08□□□□□ -0.8
SPARC-202ENST00000520687 WNT3AP56704 352 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 USP46P62068 366 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 SF3A3Q12874 501 aaKnown RBP eCLIP10.08□□□□□ -0.8
SPARC-202ENST00000520687 SLC12A1Q13621 1099 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 THOC5Q13769 683 aaKnown RBP10.08□□□□□ -0.8
SPARC-202ENST00000520687 POLD3Q15054 466 aaPredicted RBP10.08□□□□□ -0.8
SPARC-202ENST00000520687 TSNAXIP1Q2TAA8 658 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 RABGAP1LQ5R372 815 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 C1orf53Q5VUE5 145 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 KDELC1Q6UW63 502 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 UNC5BQ8IZJ1 945 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 KIRREL3Q8IZU9 778 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 NETO2Q8NC67 525 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 IPMKQ8NFU5 416 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 PIWIL2Q8TC59 973 aaKnown RBP10.08□□□□□ -0.8
SPARC-202ENST00000520687 TADA1Q96BN2 335 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 MFSD3Q96ES6 412 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 VPS39Q96JC1 886 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 MAGEH1Q9H213 219 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 C12orf65Q9H3J6 166 aaKnown RBP10.08□□□□□ -0.8
SPARC-202ENST00000520687 MMADHCQ9H3L0 296 aaPredicted RBP10.08□□□□□ -0.8
SPARC-202ENST00000520687 NOL6Q9H6R4 1146 aaKnown RBP10.08□□□□□ -0.8
SPARC-202ENST00000520687 SP110Q9HB58 689 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 CD248Q9HCU0 757 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 TRPC7Q9HCX4 862 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 IARS2Q9NSE4 1012 aaKnown RBP10.08□□□□□ -0.8
SPARC-202ENST00000520687 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.08□□□□□ -0.8
SPARC-202ENST00000520687 COPG2Q9UBF2 871 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 AFF4Q9UHB7 1163 aaKnown RBP10.08□□□□□ -0.8
SPARC-202ENST00000520687 EMCNQ9ULC0 261 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 CDY1Q9Y6F8 540 aa10.08□□□□□ -0.8
SPARC-202ENST00000520687 A0A087X1B8 175 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 F5H5T6 163 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 KLHL2O95198 593 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 ATP6V1G2O95670 118 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 GSRP00390 522 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 C2P06681 752 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 T-ENOLP0DO92 83 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 RALBP11234 206 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 FGF3P11487 239 aaPredicted RBP10.07□□□□□ -0.8
SPARC-202ENST00000520687 ALOX15P16050 662 aaPredicted RBP10.07□□□□□ -0.8
SPARC-202ENST00000520687 CCND1P24385 295 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 NMBRP28336 390 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 SERPINB5P36952 375 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 ETFBP38117 255 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 SLC26A3P40879 764 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 ARCN1P48444 511 aaKnown RBP10.07□□□□□ -0.8
SPARC-202ENST00000520687 SLC1A6P48664 564 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 PGFP49763 221 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 SERPINH1P50454 418 aaKnown RBP10.07□□□□□ -0.8
SPARC-202ENST00000520687 CSRP3P50461 194 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 POU4F1Q01851 419 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 FPGSQ05932 587 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 OVGP1Q12889 678 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 SERINC3Q13530 473 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 RFTN1Q14699 578 aaPredicted RBP10.07□□□□□ -0.8
SPARC-202ENST00000520687 RAB30Q15771 203 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 WASHC2DQ5SRD0 308 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 FBXL22Q6P050 247 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 RNF19BQ6ZMZ0 732 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms