RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 TMEM9BQ9NQ34 198 aa18.71■□□□□ 0.59
SREK1-207ENST00000520058 A0A0A6YYK5 440 aaPredicted RBP18.7■□□□□ 0.58
SREK1-207ENST00000520058 LNP1A1A4G5 178 aa18.7■□□□□ 0.58
SREK1-207ENST00000520058 PATE3B3GLJ2 98 aa18.7■□□□□ 0.58
SREK1-207ENST00000520058 PLRG1O43660 514 aaKnown RBP18.7■□□□□ 0.58
SREK1-207ENST00000520058 ZNF821O75541 412 aaPredicted RBP18.7■□□□□ 0.58
SREK1-207ENST00000520058 CTSLP07711 333 aa18.7■□□□□ 0.58
SREK1-207ENST00000520058 ITGB7P26010 798 aa18.7■□□□□ 0.58
SREK1-207ENST00000520058 AFF3P51826 1226 aaKnown RBP18.7■□□□□ 0.58
SREK1-207ENST00000520058 NEK3P51956 506 aa18.7■□□□□ 0.58
SREK1-207ENST00000520058 NAP1L1P55209 391 aaKnown RBP18.7■□□□□ 0.58
SREK1-207ENST00000520058 GSDMDP57764 484 aa18.7■□□□□ 0.58
SREK1-207ENST00000520058 MYLK3Q32MK0 819 aa18.7■□□□□ 0.58
SREK1-207ENST00000520058 CFAP58Q5T655 872 aa18.7■□□□□ 0.58
SREK1-207ENST00000520058 LRRC38Q5VT99 294 aa18.7■□□□□ 0.58
SREK1-207ENST00000520058 AFMIDQ63HM1 303 aa18.7■□□□□ 0.58
SREK1-207ENST00000520058 TCEAL6Q6IPX3 200 aa18.7■□□□□ 0.58
SREK1-207ENST00000520058 ADAT2Q7Z6V5 191 aaKnown RBP18.7■□□□□ 0.58
SREK1-207ENST00000520058 RHOT1Q8IXI2 618 aa18.7■□□□□ 0.58
SREK1-207ENST00000520058 ZCCHC9Q8N567 271 aaKnown RBP18.7■□□□□ 0.58
SREK1-207ENST00000520058 ATPAF2Q8N5M1 289 aa18.7■□□□□ 0.58
SREK1-207ENST00000520058 SPC24Q8NBT2 197 aa18.7■□□□□ 0.58
SREK1-207ENST00000520058 FAM71BQ8TC56 605 aa18.7■□□□□ 0.58
SREK1-207ENST00000520058 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.7■□□□□ 0.58
SREK1-207ENST00000520058 TCEAL3Q969E4 200 aa18.7■□□□□ 0.58
SREK1-207ENST00000520058 ZNF599Q96NL3 588 aa18.7■□□□□ 0.58
SREK1-207ENST00000520058 DDX56Q9NY93 547 aaKnown RBP18.7■□□□□ 0.58
SREK1-207ENST00000520058 IPO11Q9UI26 975 aaKnown RBP18.7■□□□□ 0.58
SREK1-207ENST00000520058 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.7■□□□□ 0.58
SREK1-207ENST00000520058 SOWAHDA6NJG2 315 aa18.69■□□□□ 0.58
SREK1-207ENST00000520058 ENGP17813 658 aa18.69■□□□□ 0.58
SREK1-207ENST00000520058 FECHP22830 423 aa18.69■□□□□ 0.58
SREK1-207ENST00000520058 HADHBP55084 474 aaKnown RBP18.69■□□□□ 0.58
SREK1-207ENST00000520058 DPYSL3Q14195 570 aa18.69■□□□□ 0.58
SREK1-207ENST00000520058 ZNF805Q5CZA5 627 aa18.69■□□□□ 0.58
SREK1-207ENST00000520058 STPG1Q5TH74 334 aa18.69■□□□□ 0.58
SREK1-207ENST00000520058 AGBL4Q5VU57 503 aa18.69■□□□□ 0.58
SREK1-207ENST00000520058 IL27RAQ6UWB1 636 aa18.69■□□□□ 0.58
SREK1-207ENST00000520058 KIAA1328Q86T90 577 aa18.69■□□□□ 0.58
SREK1-207ENST00000520058 ZSCAN30Q86W11 494 aa18.69■□□□□ 0.58
SREK1-207ENST00000520058 ARHGAP12Q8IWW6 846 aa18.69■□□□□ 0.58
SREK1-207ENST00000520058 PAF1Q8N7H5 531 aa18.69■□□□□ 0.58
SREK1-207ENST00000520058 TSC1Q92574 1164 aa18.69■□□□□ 0.58
SREK1-207ENST00000520058 RAB7BQ96AH8 199 aa18.69■□□□□ 0.58
SREK1-207ENST00000520058 FAM131CQ96AQ9 280 aa18.69■□□□□ 0.58
SREK1-207ENST00000520058 ZNF830Q96NB3 372 aaPredicted RBP18.69■□□□□ 0.58
SREK1-207ENST00000520058 GTPBP2Q9BX10 602 aaKnown RBP18.69■□□□□ 0.58
SREK1-207ENST00000520058 CPEB1Q9BZB8 566 aaKnown RBP18.69■□□□□ 0.58
SREK1-207ENST00000520058 KLC2Q9H0B6 622 aa18.69■□□□□ 0.58
SREK1-207ENST00000520058 MFHAS1Q9Y4C4 1052 aa18.69■□□□□ 0.58
SREK1-207ENST00000520058 ACTL7AQ9Y615 435 aa18.69■□□□□ 0.58
SREK1-207ENST00000520058 WASF2Q9Y6W5 498 aa18.69■□□□□ 0.58
SREK1-207ENST00000520058 A0A1W2PPC4 97 aa18.68■□□□□ 0.58
SREK1-207ENST00000520058 LRRD1A4D1F6 860 aa18.68■□□□□ 0.58
SREK1-207ENST00000520058 J3KR12 359 aa18.68■□□□□ 0.58
SREK1-207ENST00000520058 ARHGAP33O14559 1287 aa18.68■□□□□ 0.58
SREK1-207ENST00000520058 SLC30A4O14863 429 aa18.68■□□□□ 0.58
SREK1-207ENST00000520058 MX2P20592 715 aa18.68■□□□□ 0.58
SREK1-207ENST00000520058 XPAP23025 273 aaPredicted RBP18.68■□□□□ 0.58
SREK1-207ENST00000520058 HSPA9P38646 679 aaKnown RBP18.68■□□□□ 0.58
SREK1-207ENST00000520058 MAPK8P45983 427 aa18.68■□□□□ 0.58
SREK1-207ENST00000520058 TAS2R40P59535 323 aa18.68■□□□□ 0.58
SREK1-207ENST00000520058 RACK1P63244 317 aaKnown RBP18.68■□□□□ 0.58
SREK1-207ENST00000520058 ZNF235Q14590 738 aa18.68■□□□□ 0.58
SREK1-207ENST00000520058 SETMARQ53H47 684 aaPredicted RBP18.68■□□□□ 0.58
SREK1-207ENST00000520058 ANKRD20A8PQ5CZ79 823 aa18.68■□□□□ 0.58
SREK1-207ENST00000520058 GDPD4Q6W3E5 623 aa18.68■□□□□ 0.58
SREK1-207ENST00000520058 TRIM69Q86WT6 500 aa18.68■□□□□ 0.58
SREK1-207ENST00000520058 VSIG1Q86XK7 387 aa18.68■□□□□ 0.58
SREK1-207ENST00000520058 NPWQ8N729 165 aa18.68■□□□□ 0.58
SREK1-207ENST00000520058 ARRDC3Q96B67 414 aa18.68■□□□□ 0.58
SREK1-207ENST00000520058 PDFQ9HBH1 243 aa18.68■□□□□ 0.58
SREK1-207ENST00000520058 CAPN10Q9HC96 672 aa18.68■□□□□ 0.58
SREK1-207ENST00000520058 SEPT3Q9UH03 358 aa18.68■□□□□ 0.58
SREK1-207ENST00000520058 DMTF1Q9Y222 760 aa18.68■□□□□ 0.58
SREK1-207ENST00000520058 TMEM131Q92545 1883 aa18.67■□□□□ 0.58
SREK1-207ENST00000520058 SPTBN4Q9H254 2564 aa18.67■□□□□ 0.58
SREK1-207ENST00000520058 CFAP54Q96N23 3096 aa18.67■□□□□ 0.58
SREK1-207ENST00000520058 ZNF487B1APH4 448 aa18.67■□□□□ 0.58
SREK1-207ENST00000520058 PLK4O00444 970 aa18.67■□□□□ 0.58
SREK1-207ENST00000520058 NEMP1O14524 444 aa18.67■□□□□ 0.58
SREK1-207ENST00000520058 NRDCO43847 1150 aa18.67■□□□□ 0.58
SREK1-207ENST00000520058 GDF9O60383 454 aa18.67■□□□□ 0.58
SREK1-207ENST00000520058 NEBLO76041 1014 aa18.67■□□□□ 0.58
SREK1-207ENST00000520058 PCDH8O95206 1070 aa18.67■□□□□ 0.58
SREK1-207ENST00000520058 UGT2B4P06133 528 aa18.67■□□□□ 0.58
SREK1-207ENST00000520058 TNNT1P13805 278 aa18.67■□□□□ 0.58
SREK1-207ENST00000520058 ADRB3P13945 408 aa18.67■□□□□ 0.58
SREK1-207ENST00000520058 KDELR1P24390 212 aa18.67■□□□□ 0.58
SREK1-207ENST00000520058 GRIA4P48058 902 aa18.67■□□□□ 0.58
SREK1-207ENST00000520058 NSUN2Q08J23 767 aaKnown RBP eCLIP18.67■□□□□ 0.58
SREK1-207ENST00000520058 CYTH1Q15438 398 aa18.67■□□□□ 0.58
SREK1-207ENST00000520058 IFI16Q16666 785 aaKnown RBP18.67■□□□□ 0.58
SREK1-207ENST00000520058 ATP13A4Q4VNC1 1196 aa18.67■□□□□ 0.58
SREK1-207ENST00000520058 ATXN7L2Q5T6C5 722 aaPredicted RBP18.67■□□□□ 0.58
SREK1-207ENST00000520058 PIP5KL1Q5T9C9 394 aa18.67■□□□□ 0.58
SREK1-207ENST00000520058 TIGD7Q6NT04 549 aaPredicted RBP18.67■□□□□ 0.58
SREK1-207ENST00000520058 OR6K2Q8NGY2 324 aa18.67■□□□□ 0.58
SREK1-207ENST00000520058 HCAR2Q8TDS4 363 aa18.67■□□□□ 0.58
SREK1-207ENST00000520058 FEM1CQ96JP0 617 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms