RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 NCOA5Q9HCD5 579 aaKnown RBP3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 TBC1D22BQ9NU19 505 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 SPTLC3Q9NUV7 552 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 FBXL12Q9NXK8 326 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 COL4A3BPQ9Y5P4 624 aa3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 YLPM1P49750 1951 aaKnown RBP3.27□□□□□ -1.89
SCARNA13-201ENST00000516672 TRIP11Q15643 1979 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 IGLV3-22A0A075B6J6 115 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 hCG_1642624A0A1W2PR95 340 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 B4E171 279 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 UBFD1O14562 309 aaKnown RBP3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 SCAMP2O15127 329 aaKnown RBP3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 MSH4O15457 936 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 GPRIN2O60269 458 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 CACNG3O60359 315 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 CSF2P04141 144 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 SP1P08047 785 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 IGFBP5P24593 272 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 MSNP26038 577 aaKnown RBP3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 MZF1P28698 734 aaPredicted RBP3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 MARCKSP29966 332 aaPredicted RBP3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 SFNP31947 248 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 MAN1A1P33908 653 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 KRT2P35908 639 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 TSPAN7P41732 249 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 PTH2RP49190 550 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 ADKP55263 362 aaKnown RBP3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 RPS18P62269 152 aaKnown RBP3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 NUCB2P80303 420 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 PRKCEQ02156 737 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 SOX4Q06945 474 aaPredicted RBP3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 NCBP1Q09161 790 aaKnown RBP3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 C1orf61Q13536 156 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 MYBPC2Q14324 1141 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 NPY5RQ15761 445 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 HIF1AQ16665 826 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 AMHR2Q16671 573 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 GLRA4Q5JXX5 417 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 FAM120AOSQ5T036 256 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 B3GNTL1Q67FW5 361 aaPredicted RBP3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 MCTP1Q6DN14 999 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 SLC27A1Q6PCB7 646 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 WDR59Q6PJI9 974 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 C6orf15Q6UXA7 325 aaPredicted RBP3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 USP30Q70CQ3 517 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 GPRIN1Q7Z2K8 1008 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 MTERF4Q7Z6M4 381 aaKnown RBP3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 ACOT1Q86TX2 421 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 PIM3Q86V86 326 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 EXOC8Q8IYI6 725 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 SLC22A18ASQ8N1D0 253 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 ARL10Q8N8L6 244 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 BMPERQ8N8U9 685 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 NECAB1Q8N987 351 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 FAM184AQ8NB25 1140 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 RDM1Q8NG50 284 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 DNAJB14Q8TBM8 379 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 FAM216AQ8WUB2 273 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 ASB5Q8WWX0 329 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 ANKRD7Q92527 254 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 TNFRSF25Q93038 417 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 DACT3Q96B18 629 aaPredicted RBP3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 C8orf76Q96K31 380 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 MAGEB10Q96LZ2 347 aaPredicted RBP3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 XPO6Q96QU8 1125 aaKnown RBP3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 RUFY1Q96T51 708 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 MYOCQ99972 504 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 MXRA8Q9BRK3 442 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 ZPBPQ9BS86 351 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 ANO3Q9BYT9 981 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 FAM13BQ9NYF5 915 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 VPS54Q9P1Q0 977 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 SIRPGQ9P1W8 387 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 CFAP97Q9P2B7 532 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 TBC1D14Q9P2M4 693 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 CCDC39Q9UFE4 941 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 TPX2Q9ULW0 747 aaKnown RBP3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 PPT2Q9UMR5 302 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 PCDHB8Q9UN66 801 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 NAALADL1Q9UQQ1 740 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 MTMR6Q9Y217 621 aa3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 MORC2Q9Y6X9 1032 aaPredicted RBP3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 PLECQ15149 4684 aaKnown RBP3.26□□□□□ -1.89
SCARNA13-201ENST00000516672 DNAH3Q8TD57 4116 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 FSIP2Q5CZC0 6907 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 DNAH10Q8IVF4 4471 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 TBC1D3DA0A087WVF3 549 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 TBC1D3IA0A087WXS9 549 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 TBC1D3EA0A087X179 549 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 TBC1D3KA0A087X1G2 549 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 A0A1B0GUA9 196 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 A0A1W2PP55 124 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 SYCE3A1L190 88 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 TBC1D3FA6NER0 549 aaPredicted RBP3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 TBC1D3LB9A6J9 549 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 FAM86B1E9PN63 330 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 PRAMEF26H0Y7S4 382 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 PODXLO00592 558 aa3.25□□□□□ -1.89
SCARNA13-201ENST00000516672 CES2O00748 559 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms