RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 RSPRY1Q96DX4 576 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 PGBD1Q96JS3 809 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 PDLIM2Q96JY6 352 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 LRRC3BQ96PB8 259 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 P2RY13Q9BPV8 354 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 TARS2Q9BW92 718 aaKnown RBP3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 BRINP2Q9C0B6 783 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 NXF3Q9H4D5 531 aaKnown RBP3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 TASP1Q9H6P5 420 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 GKN1Q9NS71 199 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 TMEM74BQ9NUR3 256 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 PRMT7Q9NVM4 692 aaPredicted RBP3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 TBX20Q9UMR3 447 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 GON4LQ3T8J9 2241 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 CELSR3Q9NYQ7 3312 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 CEP192Q8TEP8 1941 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 ADAMTS9Q9P2N4 1935 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 PLXND1Q9Y4D7 1925 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 PTPN13Q12923 2485 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 hCG_1642624A0A1W2PR95 340 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 ANKRD62A6NC57 917 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 WIPF3A6NGB9 483 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 CASTOR2A6NHX0 329 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 CBX4O00257 560 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 PTGESO14684 152 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 SH3BP5O60239 455 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 CBFA2T3O75081 653 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 OAZ2O95190 189 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 EGFP01133 1207 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 XRCC6P12956 609 aaKnown RBP eCLIP3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 TKTP29401 623 aaKnown RBP3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 RPL9P32969 192 aaKnown RBP3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 ARL2P36404 184 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 ALDH1A3P47895 512 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 CSRP3P50461 194 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 MECP2P51608 486 aaKnown RBP3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 CLCNKBP51801 687 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 MBTD1Q05BQ5 628 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 TWF1Q12792 350 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 GPR17Q13304 367 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 ZNF460Q14592 562 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 PDGFRLQ15198 375 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 DHCR24Q15392 516 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 FAM187BQ17R55 369 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 C21orf62-AS1Q17RA5 79 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 KLHL22Q53GT1 634 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 CT47A1Q5JQC4 288 aaPredicted RBP3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 FAM102AQ5T9C2 384 aaPredicted RBP3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 PRAMEF9Q5VWM5 478 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 LYSMD4Q5XG99 296 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 KRTAP5-1Q6L8H4 278 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 ABHD17CQ6PCB6 329 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 MOXD1Q6UVY6 613 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 CD300LGQ6UXG3 332 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 SLC36A4Q6YBV0 504 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 Q6ZNX1 250 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 DNAJB7Q7Z6W7 309 aaPredicted RBP3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 ITIH5Q86UX2 942 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 THNSL2Q86YJ6 484 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 PNPLA1Q8N8W4 532 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 APPL2Q8NEU8 664 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 BEST2Q8NFU1 509 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 RPLP0P6Q8NHW5 317 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 TTC8Q8TAM2 541 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 HASPINQ8TF76 798 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 RUFY2Q8WXA3 655 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 CD101Q93033 1021 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 PSMG2Q969U7 264 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 TMEM143Q96AN5 459 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 CPB2Q96IY4 423 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 CCDC136Q96JN2 1154 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 ZFYVE19Q96K21 471 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 CEP170P1Q96L14 293 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 PPP1R10Q96QC0 940 aaKnown RBP3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 FNBP1Q96RU3 617 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 SH2D3AQ9BRG2 576 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 GTPBP2Q9BX10 602 aaKnown RBP3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 TEX101Q9BY14 249 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 UNC45AQ9H3U1 944 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 FZD8Q9H461 694 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 FAM124BQ9H5Z6 455 aaPredicted RBP3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 KIF9Q9HAQ2 790 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 FBRSL1Q9HCM7 1045 aaKnown RBP3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 SLC38A7Q9NVC3 462 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 B4GALT6Q9UBX8 382 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 FBXL5Q9UKA1 691 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 PTPRDP23468 1912 aa3.95□□□□□ -1.78
PDLIM5-218ENST00000513341 GOLGA4Q13439 2230 aaKnown RBP3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 TSC2P49815 1807 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 CCDC196A0A1B0GTZ2 297 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 TMEM150BA6NC51 233 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 ACKR2O00590 384 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 TRIM38O00635 465 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 SH2B2O14492 632 aaPredicted RBP3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 CHMP2AO43633 222 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 PRC1O43663 620 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 MARCH6O60337 910 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 CDKL5O76039 1030 aa3.94□□□□□ -1.78
PDLIM5-218ENST00000513341 CFIP05156 583 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms