RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 EFCAB7A8K855 629 aa9.31□□□□□ -0.92
NUP54-211ENST00000512151 K7ERQ8 282 aa9.31□□□□□ -0.92
NUP54-211ENST00000512151 ACTN4O43707 911 aaKnown RBP9.31□□□□□ -0.92
NUP54-211ENST00000512151 ZNF202O95125 648 aa9.31□□□□□ -0.92
NUP54-211ENST00000512151 MOCS2O96007 188 aaPredicted RBP9.31□□□□□ -0.92
NUP54-211ENST00000512151 MT-CO1P00395 513 aa9.31□□□□□ -0.92
NUP54-211ENST00000512151 FGF3P11487 239 aaPredicted RBP9.31□□□□□ -0.92
NUP54-211ENST00000512151 CHRNA3P32297 505 aa9.31□□□□□ -0.92
NUP54-211ENST00000512151 PIK3CAP42336 1068 aa9.31□□□□□ -0.92
NUP54-211ENST00000512151 SYKP43405 635 aa9.31□□□□□ -0.92
NUP54-211ENST00000512151 PLK1P53350 603 aa9.31□□□□□ -0.92
NUP54-211ENST00000512151 RAD23BP54727 409 aa9.31□□□□□ -0.92
NUP54-211ENST00000512151 DAOAP59103 153 aa9.31□□□□□ -0.92
NUP54-211ENST00000512151 GOLGA7BQ2TAP0 167 aa9.31□□□□□ -0.92
NUP54-211ENST00000512151 FAXCQ5TGI0 409 aa9.31□□□□□ -0.92
NUP54-211ENST00000512151 RAP1GAP2Q684P5 730 aa9.31□□□□□ -0.92
NUP54-211ENST00000512151 CXorf57Q6NSI4 855 aaKnown RBP9.31□□□□□ -0.92
NUP54-211ENST00000512151 ERN2Q76MJ5 926 aaKnown RBP9.31□□□□□ -0.92
NUP54-211ENST00000512151 CCDC117Q8IWD4 279 aaPredicted RBP9.31□□□□□ -0.92
NUP54-211ENST00000512151 C12orf56Q8IXR9 622 aa9.31□□□□□ -0.92
NUP54-211ENST00000512151 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.31□□□□□ -0.92
NUP54-211ENST00000512151 OR2A12Q8NGT7 310 aa9.31□□□□□ -0.92
NUP54-211ENST00000512151 GPBAR1Q8TDU6 330 aa9.31□□□□□ -0.92
NUP54-211ENST00000512151 CLEC4CQ8WTT0 213 aa9.31□□□□□ -0.92
NUP54-211ENST00000512151 BTN2A2Q8WVV5 523 aa9.31□□□□□ -0.92
NUP54-211ENST00000512151 SLC39A13Q96H72 371 aa9.31□□□□□ -0.92
NUP54-211ENST00000512151 TBATAQ96M53 351 aa9.31□□□□□ -0.92
NUP54-211ENST00000512151 C1QTNF2Q9BXJ5 285 aa9.31□□□□□ -0.92
NUP54-211ENST00000512151 ERRFI1Q9UJM3 462 aaPredicted RBP9.31□□□□□ -0.92
NUP54-211ENST00000512151 GPR34Q9UPC5 381 aa9.31□□□□□ -0.92
NUP54-211ENST00000512151 B3GALT1Q9Y5Z6 326 aa9.31□□□□□ -0.92
NUP54-211ENST00000512151 CCDC168Q8NDH2 2452 aa9.31□□□□□ -0.92
NUP54-211ENST00000512151 TNRC6AQ8NDV7 1962 aaKnown RBP9.3□□□□□ -0.92
NUP54-211ENST00000512151 LOC101059948A0A1B0GTJ6 334 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 IGLON5A6NGN9 336 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 TTLL8A6PVC2 850 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 PIK3R2O00459 728 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 FPGTO14772 594 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 XPO1O14980 1071 aaKnown RBP9.3□□□□□ -0.92
NUP54-211ENST00000512151 RAD1O60671 282 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 FYNP06241 537 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 TRIM21P19474 475 aaKnown RBP9.3□□□□□ -0.92
NUP54-211ENST00000512151 PTMSP20962 102 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 TACR2P21452 398 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 CASP1P29466 404 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 IGFALSP35858 605 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 TXLNAP40222 546 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 STAT6P42226 847 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 IRAK1P51617 712 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 RPS21P63220 83 aaKnown RBP9.3□□□□□ -0.92
NUP54-211ENST00000512151 SULT2A1Q06520 285 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 FAM26FQ5R3K3 315 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 KCTD16Q68DU8 428 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 TCTN3Q6NUS6 607 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 CCDC73Q6ZRK6 1079 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 ASB18Q6ZVZ8 466 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 SPRED1Q7Z699 444 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 GRAMD1CQ8IYS0 662 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 UNC5BQ8IZJ1 945 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 CCAR2Q8N163 923 aaKnown RBP9.3□□□□□ -0.92
NUP54-211ENST00000512151 SH2D3CQ8N5H7 860 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 EFCAB3Q8N7B9 438 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 RCBTB1Q8NDN9 531 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 TMIEQ8NEW7 156 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 TAS1R2Q8TE23 839 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 LENG8Q96PV6 779 aaPredicted RBP9.3□□□□□ -0.92
NUP54-211ENST00000512151 TAAR9Q96RI9 348 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 DDX50Q9BQ39 737 aaKnown RBP9.3□□□□□ -0.92
NUP54-211ENST00000512151 HDAC8Q9BY41 377 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 SLC13A1Q9BZW2 595 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 NIF3L1Q9GZT8 377 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 LRRC4Q9HBW1 653 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 DMAC2Q9NW81 257 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 DKK3Q9UBP4 350 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 GGT7Q9UJ14 662 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 PCDHGA3Q9Y5H0 932 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 OR51B4Q9Y5P0 310 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 FADS3Q9Y5Q0 445 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 SPG11Q96JI7 2443 aa9.3□□□□□ -0.92
NUP54-211ENST00000512151 SMAD6O43541 496 aaKnown RBP9.29□□□□□ -0.92
NUP54-211ENST00000512151 SRCP12931 536 aa9.29□□□□□ -0.92
NUP54-211ENST00000512151 LCP1P13796 627 aa9.29□□□□□ -0.92
NUP54-211ENST00000512151 SNRPFP62306 86 aaKnown RBP9.29□□□□□ -0.92
NUP54-211ENST00000512151 SLC12A1Q13621 1099 aa9.29□□□□□ -0.92
NUP54-211ENST00000512151 PTK2BQ14289 1009 aa9.29□□□□□ -0.92
NUP54-211ENST00000512151 PRR30Q53SZ7 412 aaPredicted RBP9.29□□□□□ -0.92
NUP54-211ENST00000512151 ARSIQ5FYB1 569 aa9.29□□□□□ -0.92
NUP54-211ENST00000512151 TMEM164Q5U3C3 297 aa9.29□□□□□ -0.92
NUP54-211ENST00000512151 KIAA1161Q6NSJ0 714 aa9.29□□□□□ -0.92
NUP54-211ENST00000512151 KRBA2Q6ZNG9 492 aa9.29□□□□□ -0.92
NUP54-211ENST00000512151 CHSY1Q86X52 802 aa9.29□□□□□ -0.92
NUP54-211ENST00000512151 IQUBQ8NA54 791 aa9.29□□□□□ -0.92
NUP54-211ENST00000512151 GPR156Q8NFN8 814 aa9.29□□□□□ -0.92
NUP54-211ENST00000512151 UBA3Q8TBC4 463 aa9.29□□□□□ -0.92
NUP54-211ENST00000512151 GRIN3AQ8TCU5 1115 aa9.29□□□□□ -0.92
NUP54-211ENST00000512151 DQX1Q8TE96 717 aaKnown RBP9.29□□□□□ -0.92
NUP54-211ENST00000512151 PAGE5Q96GU1 130 aa9.29□□□□□ -0.92
NUP54-211ENST00000512151 RDH14Q9HBH5 336 aa9.29□□□□□ -0.92
NUP54-211ENST00000512151 KBTBD4Q9NVX7 518 aa9.29□□□□□ -0.92
NUP54-211ENST00000512151 SLC25A13Q9UJS0 675 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms