RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 LEFTY1O75610 366 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 F13A1P00488 732 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 IGLV3-25P01717 112 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 RPLP0P05388 317 aaKnown RBP11.79□□□□□ -0.52
RNF4-216ENST00000511859 TSHRP16473 764 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 ITIH1P19827 911 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 L1CAMP32004 1257 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 ACADSBP45954 432 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 PPARDQ03181 441 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 ZFP36L1Q07352 338 aaKnown RBP11.79□□□□□ -0.52
RNF4-216ENST00000511859 ELOCQ15369 112 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 TPRG1LQ5T0D9 272 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 TMEM270Q6UE05 265 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 RBFAQ8N0V3 343 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 OR52K2Q8NGK3 314 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 CCDC74AQ96AQ1 378 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 CATSPER2Q96P56 530 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 EPAS1Q99814 870 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 LRRC61Q9BV99 259 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 C2orf49Q9BVC5 232 aaPredicted RBP11.79□□□□□ -0.52
RNF4-216ENST00000511859 CPEB1Q9BZB8 566 aaKnown RBP11.79□□□□□ -0.52
RNF4-216ENST00000511859 CLPBQ9H078 707 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 MUC3BQ9H195 1237 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 TCEAL2Q9H3H9 227 aaPredicted RBP11.79□□□□□ -0.52
RNF4-216ENST00000511859 POPDC2Q9HBU9 364 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 RABGEF1Q9UJ41 708 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 CRYBG3Q68DQ2 2970 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 ARHGEF17Q96PE2 2063 aaPredicted RBP11.79□□□□□ -0.52
RNF4-216ENST00000511859 IGLON5A6NGN9 336 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 STMND1H3BQB6 276 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 RNF103O00237 685 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 ALPIP09923 528 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 ITGB7P26010 798 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 CCR1P32246 355 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 CDH4P55283 916 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 YWHAZP63104 245 aaKnown RBP11.79□□□□□ -0.52
RNF4-216ENST00000511859 AUHQ13825 339 aaKnown RBP11.79□□□□□ -0.52
RNF4-216ENST00000511859 RESP18Q5W5W9 173 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 ATCAYQ86WG3 371 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 UBR7Q8N806 425 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 CHST14Q8NCH0 376 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 SPATA20Q8TB22 786 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 GRIN3AQ8TCU5 1115 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 GPBAR1Q8TDU6 330 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 RAB7BQ96AH8 199 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 CENPTQ96BT3 561 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 MED15Q96RN5 788 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 FOXJ2Q9P0K8 574 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 PLEKHB1Q9UF11 243 aaPredicted RBP11.79□□□□□ -0.52
RNF4-216ENST00000511859 SERTAD1Q9UHV2 236 aa11.79□□□□□ -0.52
RNF4-216ENST00000511859 MED13Q9UHV7 2174 aa11.78□□□□□ -0.52
RNF4-216ENST00000511859 ESPL1Q14674 2120 aa11.78□□□□□ -0.52
RNF4-216ENST00000511859 C9orf172C9J069 976 aa11.78□□□□□ -0.52
RNF4-216ENST00000511859 K7ERQ8 282 aa11.78□□□□□ -0.52
RNF4-216ENST00000511859 SMAD6O43541 496 aaKnown RBP11.78□□□□□ -0.52
RNF4-216ENST00000511859 EPB41P11171 864 aaKnown RBP11.78□□□□□ -0.52
RNF4-216ENST00000511859 PNLIPP16233 465 aa11.78□□□□□ -0.52
RNF4-216ENST00000511859 RRM1P23921 792 aa11.78□□□□□ -0.52
RNF4-216ENST00000511859 ETV5P41161 510 aa11.78□□□□□ -0.52
RNF4-216ENST00000511859 CD97P48960 835 aa11.78□□□□□ -0.52
RNF4-216ENST00000511859 ATP1A2P50993 1020 aa11.78□□□□□ -0.52
RNF4-216ENST00000511859 MAPK10P53779 464 aa11.78□□□□□ -0.52
RNF4-216ENST00000511859 C5orf22Q49AR2 442 aa11.78□□□□□ -0.52
RNF4-216ENST00000511859 CBWD6Q4V339 395 aa11.78□□□□□ -0.52
RNF4-216ENST00000511859 CBWD3Q5JTY5 395 aa11.78□□□□□ -0.52
RNF4-216ENST00000511859 CBWD5Q5RIA9 395 aa11.78□□□□□ -0.52
RNF4-216ENST00000511859 DPY19L3Q6ZPD9 716 aa11.78□□□□□ -0.52
RNF4-216ENST00000511859 GUF1Q8N442 669 aaKnown RBP11.78□□□□□ -0.52
RNF4-216ENST00000511859 CCDC47Q96A33 483 aaKnown RBP11.78□□□□□ -0.52
RNF4-216ENST00000511859 MIB2Q96AX9 1013 aa11.78□□□□□ -0.52
RNF4-216ENST00000511859 PSMB7Q99436 277 aa11.78□□□□□ -0.52
RNF4-216ENST00000511859 HEPHQ9BQS7 1158 aa11.78□□□□□ -0.52
RNF4-216ENST00000511859 ZSWIM1Q9BR11 485 aa11.78□□□□□ -0.52
RNF4-216ENST00000511859 THAP9Q9H5L6 903 aa11.78□□□□□ -0.52
RNF4-216ENST00000511859 ST7Q9NRC1 585 aa11.78□□□□□ -0.52
RNF4-216ENST00000511859 AKAP7Q9P0M2 348 aaPredicted RBP11.78□□□□□ -0.52
RNF4-216ENST00000511859 APPL1Q9UKG1 709 aa11.78□□□□□ -0.52
RNF4-216ENST00000511859 VANGL2Q9ULK5 521 aa11.78□□□□□ -0.52
RNF4-216ENST00000511859 PNMA8BQ9ULN7 279 aaPredicted RBP11.78□□□□□ -0.52
RNF4-216ENST00000511859 WASF2Q9Y6W5 498 aa11.78□□□□□ -0.52
RNF4-216ENST00000511859 CELSR2Q9HCU4 2923 aa11.77□□□□□ -0.52
RNF4-216ENST00000511859 RNF225M0QZC1 329 aaPredicted RBP11.77□□□□□ -0.53
RNF4-216ENST00000511859 CAPN5O15484 640 aaPredicted RBP11.77□□□□□ -0.53
RNF4-216ENST00000511859 ACTN4O43707 911 aaKnown RBP11.77□□□□□ -0.53
RNF4-216ENST00000511859 SNAP91O60641 907 aa11.77□□□□□ -0.53
RNF4-216ENST00000511859 RHOBTB3O94955 611 aa11.77□□□□□ -0.53
RNF4-216ENST00000511859 CTSEP14091 401 aa11.77□□□□□ -0.53
RNF4-216ENST00000511859 EIF4A3P38919 411 aaKnown RBP11.77□□□□□ -0.53
RNF4-216ENST00000511859 GPD2P43304 727 aa11.77□□□□□ -0.53
RNF4-216ENST00000511859 CENPCQ03188 943 aa11.77□□□□□ -0.53
RNF4-216ENST00000511859 SLC20A2Q08357 652 aa11.77□□□□□ -0.53
RNF4-216ENST00000511859 EDRF1Q3B7T1 1238 aa11.77□□□□□ -0.53
RNF4-216ENST00000511859 MACC1Q6ZN28 852 aa11.77□□□□□ -0.53
RNF4-216ENST00000511859 GKN2Q86XP6 184 aa11.77□□□□□ -0.53
RNF4-216ENST00000511859 KYQ8NBH2 561 aa11.77□□□□□ -0.53
RNF4-216ENST00000511859 C9orf43Q8TAL5 461 aaPredicted RBP11.77□□□□□ -0.53
RNF4-216ENST00000511859 STK32AQ8WU08 396 aa11.77□□□□□ -0.53
RNF4-216ENST00000511859 NKD1Q969G9 470 aa11.77□□□□□ -0.53
RNF4-216ENST00000511859 ARHGEF26Q96DR7 871 aa11.77□□□□□ -0.53
RNF4-216ENST00000511859 EDEM3Q9BZQ6 932 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms