RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 TAS1R2Q8TE23 839 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 SETD7Q8WTS6 366 aaKnown RBP6.93□□□□□ -1.3
COPS4-209ENST00000511653 MFSD3Q96ES6 412 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 CYFIP2Q96F07 1278 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 IPO9Q96P70 1041 aaKnown RBP6.93□□□□□ -1.3
COPS4-209ENST00000511653 GAREM1Q9H706 876 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 MAGEF1Q9HAY2 307 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 PNPLA8Q9NP80 782 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 ITM2CQ9NQX7 267 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 EIF2B4Q9UI10 523 aaKnown RBP6.93□□□□□ -1.3
COPS4-209ENST00000511653 PCDHA7Q9UN72 937 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 BTBD3Q9Y2F9 522 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 PCDHA5Q9Y5H7 936 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 COL12A1Q99715 3063 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 A0A1B0GVT2 93 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 BCAT2O15382 392 aaPredicted RBP6.93□□□□□ -1.3
COPS4-209ENST00000511653 KIF20AO95235 890 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 IGLV3-19P01714 112 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 MYCLP1P12525 358 aaPredicted RBP6.93□□□□□ -1.3
COPS4-209ENST00000511653 GCLMP48507 274 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 PPP3CAQ08209 521 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 HLA-BQ31612 363 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 RNF187Q5TA31 235 aaPredicted RBP6.93□□□□□ -1.3
COPS4-209ENST00000511653 BHLHA9Q7RTU4 235 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 ANKS1BQ7Z6G8 1248 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 THAP5Q7Z6K1 395 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 CPNE8Q86YQ8 564 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 DENND1CQ8IV53 801 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 NDRG1Q92597 394 aaKnown RBP6.93□□□□□ -1.3
COPS4-209ENST00000511653 TAF4BQ92750 862 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 SIPA1Q96FS4 1042 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 ZNF396Q96N95 335 aaPredicted RBP6.93□□□□□ -1.3
COPS4-209ENST00000511653 ZDHHC5Q9C0B5 715 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 CIPCQ9C0C6 399 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 C6orf106Q9H6K1 298 aaPredicted RBP6.93□□□□□ -1.3
COPS4-209ENST00000511653 MMRN2Q9H8L6 949 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 PCDH12Q9NPG4 1184 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 TM7SF3Q9NS93 570 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 EXOC1Q9NV70 894 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 ELOVL2Q9NXB9 296 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 SFMBT1Q9UHJ3 866 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 FBXL7Q9UJT9 491 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 AGO1Q9UL18 857 aaKnown RBP6.93□□□□□ -1.3
COPS4-209ENST00000511653 NFE2L3Q9Y4A8 694 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 PCDHA9Q9Y5H5 950 aa6.93□□□□□ -1.3
COPS4-209ENST00000511653 COL5A1P20908 1838 aaPredicted RBP6.92□□□□□ -1.3
COPS4-209ENST00000511653 FAM149AA5PLN7 773 aa6.92□□□□□ -1.3
COPS4-209ENST00000511653 TULP2O00295 520 aa6.92□□□□□ -1.3
COPS4-209ENST00000511653 PDXKO00764 312 aa6.92□□□□□ -1.3
COPS4-209ENST00000511653 KCNK3O14649 394 aa6.92□□□□□ -1.3
COPS4-209ENST00000511653 FGF10O15520 208 aaPredicted RBP6.92□□□□□ -1.3
COPS4-209ENST00000511653 CER1O95813 267 aa6.92□□□□□ -1.3
COPS4-209ENST00000511653 RPN1P04843 607 aaKnown RBP6.92□□□□□ -1.3
COPS4-209ENST00000511653 HOXD9P28356 352 aaPredicted RBP6.92□□□□□ -1.3
COPS4-209ENST00000511653 ACSL1P33121 698 aa6.92□□□□□ -1.3
COPS4-209ENST00000511653 MATKP42679 507 aa6.92□□□□□ -1.3
COPS4-209ENST00000511653 ME1P48163 572 aa6.92□□□□□ -1.3
COPS4-209ENST00000511653 CSNK1EP49674 416 aaKnown RBP6.92□□□□□ -1.3
COPS4-209ENST00000511653 PCBP3P57721 371 aaKnown RBP6.92□□□□□ -1.3
COPS4-209ENST00000511653 EGR3Q06889 387 aa6.92□□□□□ -1.3
COPS4-209ENST00000511653 PKP1Q13835 747 aa6.92□□□□□ -1.3
COPS4-209ENST00000511653 KIF19Q2TAC6 998 aa6.92□□□□□ -1.3
COPS4-209ENST00000511653 ZNF574Q6ZN55 896 aaPredicted RBP6.92□□□□□ -1.3
COPS4-209ENST00000511653 ZC3H3Q8IXZ2 948 aaKnown RBP6.92□□□□□ -1.3
COPS4-209ENST00000511653 CADM4Q8NFZ8 388 aa6.92□□□□□ -1.3
COPS4-209ENST00000511653 TMEM174Q8WUU8 243 aa6.92□□□□□ -1.3
COPS4-209ENST00000511653 SNX19Q92543 992 aa6.92□□□□□ -1.3
COPS4-209ENST00000511653 PRCCQ92733 491 aaPredicted RBP6.92□□□□□ -1.3
COPS4-209ENST00000511653 PAGE5Q96GU1 130 aa6.92□□□□□ -1.3
COPS4-209ENST00000511653 CCDC140Q96MF4 163 aa6.92□□□□□ -1.3
COPS4-209ENST00000511653 CDADC1Q9BWV3 514 aa6.92□□□□□ -1.3
COPS4-209ENST00000511653 DUSP16Q9BY84 665 aa6.92□□□□□ -1.3
COPS4-209ENST00000511653 CLIC5Q9NZA1 410 aa6.92□□□□□ -1.3
COPS4-209ENST00000511653 APOBEC2Q9Y235 224 aaKnown RBP6.92□□□□□ -1.3
COPS4-209ENST00000511653 PLAAQ9Y263 795 aa6.92□□□□□ -1.3
COPS4-209ENST00000511653 ZNF281Q9Y2X9 895 aa6.92□□□□□ -1.3
COPS4-209ENST00000511653 SNX11Q9Y5W9 270 aa6.92□□□□□ -1.3
COPS4-209ENST00000511653 LRRK2Q5S007 2527 aa6.91□□□□□ -1.3
COPS4-209ENST00000511653 SLC12A8A0AV02 714 aa6.91□□□□□ -1.3
COPS4-209ENST00000511653 IKBKBO14920 756 aa6.91□□□□□ -1.3
COPS4-209ENST00000511653 SYNCRIPO60506 623 aaKnown RBP6.91□□□□□ -1.3
COPS4-209ENST00000511653 TSPAN3O60637 253 aa6.91□□□□□ -1.3
COPS4-209ENST00000511653 CPP00450 1065 aa6.91□□□□□ -1.3
COPS4-209ENST00000511653 ZNF883P0CG24 379 aa6.91□□□□□ -1.3
COPS4-209ENST00000511653 RALAP11233 206 aa6.91□□□□□ -1.3
COPS4-209ENST00000511653 HLA-FP30511 346 aa6.91□□□□□ -1.3
COPS4-209ENST00000511653 SGSHP51688 502 aa6.91□□□□□ -1.3
COPS4-209ENST00000511653 VAMP7P51809 220 aa6.91□□□□□ -1.3
COPS4-209ENST00000511653 EIF4HQ15056 248 aaKnown RBP6.91□□□□□ -1.3
COPS4-209ENST00000511653 CPSF6Q16630 551 aaKnown RBP eCLIP6.91□□□□□ -1.3
COPS4-209ENST00000511653 KCNT1Q5JUK3 1230 aa6.91□□□□□ -1.3
COPS4-209ENST00000511653 ABHD17CQ6PCB6 329 aa6.91□□□□□ -1.3
COPS4-209ENST00000511653 SERPINA13PQ6UXR4 307 aa6.91□□□□□ -1.3
COPS4-209ENST00000511653 DBX2Q6ZNG2 339 aa6.91□□□□□ -1.3
COPS4-209ENST00000511653 TMPRSS7Q7RTY8 843 aa6.91□□□□□ -1.3
COPS4-209ENST00000511653 PIGZQ86VD9 579 aa6.91□□□□□ -1.3
COPS4-209ENST00000511653 FAM217AQ8IXS0 508 aa6.91□□□□□ -1.3
COPS4-209ENST00000511653 CPXM2Q8N436 756 aa6.91□□□□□ -1.3
COPS4-209ENST00000511653 ZNF276Q8N554 614 aa6.91□□□□□ -1.3
COPS4-209ENST00000511653 SLC4A11Q8NBS3 891 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms