RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 FBXO4Q9UKT5 387 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 MKLN1Q9UL63 735 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 MTMR6Q9Y217 621 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 KRTAP9-6A0A140TA67 174 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 H7C0S8 307 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 MGST3O14880 152 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 TP73O15350 636 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 NARSO43776 548 aaKnown RBP5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 KIF1CO43896 1103 aaKnown RBP5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 FOXD2O60548 495 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 IPO7O95373 1038 aaKnown RBP5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 RPN1P04843 607 aaKnown RBP5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 CHRNA5P30532 468 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 HOXA7P31268 230 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 RYKP34925 604 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 PTGER1P34995 402 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 COPB2P35606 906 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 PIP4K2AP48426 406 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 CYP2J2P51589 502 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 CTSWP56202 376 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 CEBPZQ03701 1054 aaKnown RBP5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 SLC18A2Q05940 514 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 CDC16Q13042 620 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 PKP1Q13835 747 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 AWAT1Q58HT5 328 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 CC2D1BQ5T0F9 858 aaKnown RBP5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 HECTD2Q5U5R9 776 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 ARMC3Q5W041 872 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 GPR139Q6DWJ6 353 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 HMBOX1Q6NT76 420 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 Q6ZPA2 131 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 WDR5BQ86VZ2 330 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 VRK3Q8IV63 474 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 GDPD5Q8WTR4 605 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 SGCDQ92629 289 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 NELL1Q92832 810 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 GTF3C6Q969F1 213 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 SARAFQ96BY9 339 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 CLMNQ96JQ2 1002 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 C1orf74Q96LT6 269 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 ZMAT2Q96NC0 199 aaKnown RBP5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 FTOQ9C0B1 505 aaKnown RBP eCLIP5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 CXorf56Q9H5V9 222 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 DLGAP2Q9P1A6 1054 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 MARCH4Q9P2E8 410 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 SERGEFQ9UGK8 458 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 NOL7Q9UMY1 257 aaKnown RBP5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 ZNF711Q9Y462 761 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 SESN1Q9Y6P5 492 aa5.73□□□□□ -1.49
HMGB1P47-201ENST00000511281 A0A0A0MQY5 61 aa5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 TARSL2A2RTX5 802 aaKnown RBP5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 FAM90A8PA6NJQ4 464 aa5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 EIF3CLB5ME19 914 aaKnown RBP5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 FAM157AC9JC47 383 aa5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 UBE2CO00762 179 aa5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 ENTPD3O75355 529 aa5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 CBX6O95503 412 aa5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 PLAUP00749 431 aa5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 TFP02787 698 aa5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 FAM90A13PP0C7W8 464 aa5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 FAM90A24PP0C7X0 464 aa5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 TNFRSF1AP19438 455 aa5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 TFEBP19484 476 aa5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 TBXAS1P24557 533 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 MCM3P25205 808 aa5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 YWHAQP27348 245 aa5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 HDAC4P56524 1084 aa5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 PSMD6Q15008 389 aa5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 RASA2Q15283 850 aa5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 ALG11Q2TAA5 492 aa5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 GARNL3Q5VVW2 1013 aa5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 GLDNQ6ZMI3 551 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 SCML4Q8N228 414 aa5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 C17orf53Q8N3J3 647 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 ARL14EPQ8N8R7 260 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 PIGKQ92643 395 aa5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 JAKMIP2Q96AA8 810 aa5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 RADILQ96JH8 1075 aa5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 FIZ1Q96SL8 496 aa5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 HIPK3Q9H422 1215 aa5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 PDZD7Q9H5P4 517 aa5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 PDE7BQ9NP56 450 aa5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 GIMAP4Q9NUV9 329 aa5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 UTYO14607 1347 aa5.72□□□□□ -1.49
HMGB1P47-201ENST00000511281 MSI1O43347 362 aaKnown RBP5.71□□□□□ -1.5
HMGB1P47-201ENST00000511281 HCRTR2O43614 444 aa5.71□□□□□ -1.5
HMGB1P47-201ENST00000511281 NEURL1O76050 574 aa5.71□□□□□ -1.5
HMGB1P47-201ENST00000511281 IL1AP01583 271 aa5.71□□□□□ -1.5
HMGB1P47-201ENST00000511281 WNT1P04628 370 aa5.71□□□□□ -1.5
HMGB1P47-201ENST00000511281 SLC2A4P14672 509 aa5.71□□□□□ -1.5
HMGB1P47-201ENST00000511281 ST6GAL1P15907 406 aa5.71□□□□□ -1.5
HMGB1P47-201ENST00000511281 GABRB1P18505 474 aa5.71□□□□□ -1.5
HMGB1P47-201ENST00000511281 GCH1P30793 250 aa5.71□□□□□ -1.5
HMGB1P47-201ENST00000511281 GNAQP50148 359 aa5.71□□□□□ -1.5
HMGB1P47-201ENST00000511281 HSF1Q00613 529 aa5.71□□□□□ -1.5
HMGB1P47-201ENST00000511281 FRG1Q14331 258 aaKnown RBP5.71□□□□□ -1.5
HMGB1P47-201ENST00000511281 GALNT3Q14435 633 aa5.71□□□□□ -1.5
HMGB1P47-201ENST00000511281 ASTE1Q2TB18 679 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P47-201ENST00000511281 CCDC184Q52MB2 194 aa5.71□□□□□ -1.5
HMGB1P47-201ENST00000511281 TSTD2Q5T7W7 516 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms