RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 TXLNGQ9NUQ3 528 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 PLK2Q9NYY3 685 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 CNTN3Q9P232 1028 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 KLHL14Q9P2G3 628 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 RSPH14Q9UHP6 348 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 VANGL2Q9ULK5 521 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 MRFAP1Q9Y605 127 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 A6NNZ2 444 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 CCNB2O95067 398 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 LARGE1O95461 756 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 RAC2P15153 192 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 GOT1P17174 413 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 CES1P23141 567 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 WARSP23381 471 aaKnown RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 CMA1P23946 247 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 EEF1B2P24534 225 aaKnown RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 HOXC12P31275 282 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 NOVA1P51513 510 aaKnown RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 CLCN5P51795 746 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 MGAT3Q09327 533 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 TROAPQ12815 778 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 GRM3Q14832 879 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 MAN2A1Q16706 1144 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 TUBB8Q3ZCM7 444 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 FAM78AQ5JUQ0 283 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 IZUMO3Q5VZ72 239 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 KLHL35Q6PF15 583 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 TRMT10CQ7L0Y3 403 aaKnown RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 SRLQ86TD4 932 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 MCEMP1Q8IX19 187 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 FBXO30Q8TB52 745 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 ADAM32Q8TC27 787 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 ELMO3Q96BJ8 720 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 DACH2Q96NX9 599 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 SERINC2Q96SA4 455 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 PRPF18Q99633 342 aaKnown RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 ACBD6Q9BR61 282 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 ATP13A3Q9H7F0 1226 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 NSMCE4AQ9NXX6 385 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 GTSE1Q9NYZ3 720 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 KIAA1257Q9ULG3 409 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 PCDHA7Q9UN72 937 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 INTS1Q8N201 2190 aaKnown RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 A0A088AWK7 358 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 SMIM28A0A1B0GU29 152 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 C2orf72A6NCS6 295 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 ANKRD63C9JTQ0 380 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 LILRB3O75022 631 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 CYP7B1O75881 506 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 PRNPP04156 253 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 RPN2P04844 631 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 ELFN1P0C7U0 828 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 SNHG28P0DPA3 235 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 LAMP2P13473 410 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 ITGB5P18084 799 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 ZNF10P21506 573 aaPredicted RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 SERPINA4P29622 427 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 ARRB1P49407 418 aaPredicted RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 NTHL1P78549 312 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 SIM1P81133 766 aaPredicted RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 FANCCQ00597 558 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 MCL1Q07820 350 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 COL9A2Q14055 689 aaPredicted RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 SLC39A14Q15043 492 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 CRTC2Q53ET0 693 aaPredicted RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 FASTKD1Q53R41 847 aaKnown RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 RETSATQ6NUM9 610 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 ANO5Q75V66 913 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 LZTR1Q8N653 840 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 SNX31Q8N9S9 440 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 FAR1Q8WVX9 515 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 RBM41Q96IZ5 413 aaKnown RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 CNDP2Q96KP4 475 aaKnown RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 C7orf34Q96L11 122 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 USP28Q96RU2 1077 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 TUBGCP2Q9BSJ2 902 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 TBCDQ9BTW9 1192 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 TNKS2Q9H2K2 1166 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 PALMDQ9NP74 551 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 ZC4H2Q9NQZ6 224 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 NCKIPSDQ9NZQ3 722 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 KIF17Q9P2E2 1029 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 PPARGC1AQ9UBK2 798 aaKnown RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 LIMA1Q9UHB6 759 aaKnown RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 ZMIZ1Q9ULJ6 1067 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 HCFC2Q9Y5Z7 792 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 ALG6Q9Y672 507 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 C2orf81A6NN90 581 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 MUSKO15146 869 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 SDC3O75056 442 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 CCNE2O96020 404 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 CHRM3P20309 590 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 CLK3P49761 638 aaKnown RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 NFKB2Q00653 900 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 CDC16Q13042 620 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ELOCQ15369 112 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ALG11Q2TAA5 492 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ANKRD20A8PQ5CZ79 823 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 NDUFAF5Q5TEU4 345 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms