RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 HDAC11Q96DB2 347 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 ZNF419Q96HQ0 510 aaPredicted RBP15.23■□□□□ 0.03
RNF4-210ENST00000508235 PDLIM2Q96JY6 352 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 TSGA13Q96PP4 275 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 ALS2CR12Q96Q35 445 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 TUBGCP5Q96RT8 1024 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 GPR174Q9BXC1 333 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 NEUROG2Q9H2A3 272 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 CD93Q9NPY3 652 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 LHX3Q9UBR4 397 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 EFR3BQ9Y2G0 817 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 WASF2Q9Y6W5 498 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 WDFY4Q6ZS81 3184 aa15.22■□□□□ 0.03
RNF4-210ENST00000508235 TNRC6BQ9UPQ9 1833 aaKnown RBP15.22■□□□□ 0.03
RNF4-210ENST00000508235 A0A0U1RQJ8 604 aa15.22■□□□□ 0.03
RNF4-210ENST00000508235 SEMA4FO95754 770 aa15.22■□□□□ 0.03
RNF4-210ENST00000508235 TGM2P21980 687 aa15.22■□□□□ 0.03
RNF4-210ENST00000508235 ITGB7P26010 798 aa15.22■□□□□ 0.03
RNF4-210ENST00000508235 DRD3P35462 400 aa15.22■□□□□ 0.03
RNF4-210ENST00000508235 MAPK8P45983 427 aa15.22■□□□□ 0.03
RNF4-210ENST00000508235 NR2C2P49116 596 aa15.22■□□□□ 0.03
RNF4-210ENST00000508235 GBE1Q04446 702 aa15.22■□□□□ 0.03
RNF4-210ENST00000508235 HNRNPDQ14103 355 aaKnown RBP15.22■□□□□ 0.03
RNF4-210ENST00000508235 PDK1Q15118 436 aa15.22■□□□□ 0.03
RNF4-210ENST00000508235 ATXN7L2Q5T6C5 722 aaPredicted RBP15.22■□□□□ 0.03
RNF4-210ENST00000508235 MARC1Q5VT66 337 aa15.22■□□□□ 0.03
RNF4-210ENST00000508235 KAZNQ674X7 775 aa15.22■□□□□ 0.03
RNF4-210ENST00000508235 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.22■□□□□ 0.03
RNF4-210ENST00000508235 CYP2U1Q7Z449 544 aa15.22■□□□□ 0.03
RNF4-210ENST00000508235 TP53INP2Q8IXH6 220 aa15.22■□□□□ 0.03
RNF4-210ENST00000508235 PLD5Q8N7P1 536 aa15.22■□□□□ 0.03
RNF4-210ENST00000508235 FAM131CQ96AQ9 280 aa15.22■□□□□ 0.03
RNF4-210ENST00000508235 PSKH2Q96QS6 385 aa15.22■□□□□ 0.03
RNF4-210ENST00000508235 HDAC8Q9BY41 377 aa15.22■□□□□ 0.03
RNF4-210ENST00000508235 CPEB1Q9BZB8 566 aaKnown RBP15.22■□□□□ 0.03
RNF4-210ENST00000508235 BRD8Q9H0E9 1235 aa15.22■□□□□ 0.03
RNF4-210ENST00000508235 LZTFL1Q9NQ48 299 aa15.22■□□□□ 0.03
RNF4-210ENST00000508235 DTLQ9NZJ0 730 aa15.22■□□□□ 0.03
RNF4-210ENST00000508235 SARDHQ9UL12 918 aa15.22■□□□□ 0.03
RNF4-210ENST00000508235 PPP2R2CQ9Y2T4 447 aa15.22■□□□□ 0.03
RNF4-210ENST00000508235 HEY1Q9Y5J3 304 aa15.22■□□□□ 0.03
RNF4-210ENST00000508235 CAPN6Q9Y6Q1 641 aa15.22■□□□□ 0.03
RNF4-210ENST00000508235 METTL12A8MUP2 240 aa15.21■□□□□ 0.03
RNF4-210ENST00000508235 MEI4A8MW99 385 aa15.21■□□□□ 0.03
RNF4-210ENST00000508235 PPP1R12AO14974 1030 aaPredicted RBP15.21■□□□□ 0.03
RNF4-210ENST00000508235 MATN3O15232 486 aa15.21■□□□□ 0.03
RNF4-210ENST00000508235 FOXD2O60548 495 aaPredicted RBP15.21■□□□□ 0.03
RNF4-210ENST00000508235 CST8O60676 142 aa15.21■□□□□ 0.03
RNF4-210ENST00000508235 NEBLO76041 1014 aa15.21■□□□□ 0.03
RNF4-210ENST00000508235 ACSL1P33121 698 aa15.21■□□□□ 0.03
RNF4-210ENST00000508235 HOXD12P35452 270 aa15.21■□□□□ 0.03
RNF4-210ENST00000508235 MMP13P45452 471 aa15.21■□□□□ 0.03
RNF4-210ENST00000508235 MARCKSL1P49006 195 aa15.21■□□□□ 0.03
RNF4-210ENST00000508235 NEK3P51956 506 aa15.21■□□□□ 0.03
RNF4-210ENST00000508235 DYNLT1P63172 113 aa15.21■□□□□ 0.03
RNF4-210ENST00000508235 CREB5Q02930 508 aa15.21■□□□□ 0.03
RNF4-210ENST00000508235 SLC10A7Q0GE19 358 aa15.21■□□□□ 0.03
RNF4-210ENST00000508235 ZNF805Q5CZA5 627 aa15.21■□□□□ 0.03
RNF4-210ENST00000508235 RALGPS1Q5JS13 557 aa15.21■□□□□ 0.03
RNF4-210ENST00000508235 WDR45BQ5MNZ6 344 aa15.21■□□□□ 0.03
RNF4-210ENST00000508235 FBXL19Q6PCT2 694 aa15.21■□□□□ 0.03
RNF4-210ENST00000508235 GDPD4Q6W3E5 623 aa15.21■□□□□ 0.03
RNF4-210ENST00000508235 ERN2Q76MJ5 926 aaKnown RBP15.21■□□□□ 0.03
RNF4-210ENST00000508235 RABEPKQ7Z6M1 372 aa15.21■□□□□ 0.03
RNF4-210ENST00000508235 CCNYQ8ND76 341 aa15.21■□□□□ 0.03
RNF4-210ENST00000508235 OR2T34Q8NGX1 318 aa15.21■□□□□ 0.03
RNF4-210ENST00000508235 OR6K2Q8NGY2 324 aa15.21■□□□□ 0.03
RNF4-210ENST00000508235 OR14C36Q8NHC7 312 aa15.21■□□□□ 0.03
RNF4-210ENST00000508235 HCAR2Q8TDS4 363 aa15.21■□□□□ 0.03
RNF4-210ENST00000508235 P3H4Q92791 437 aa15.21■□□□□ 0.03
RNF4-210ENST00000508235 HSPA12BQ96MM6 686 aa15.21■□□□□ 0.03
RNF4-210ENST00000508235 ZNF641Q96N77 438 aaPredicted RBP15.21■□□□□ 0.03
RNF4-210ENST00000508235 SERGEFQ9UGK8 458 aa15.21■□□□□ 0.03
RNF4-210ENST00000508235 AMACRQ9UHK6 382 aa15.21■□□□□ 0.03
RNF4-210ENST00000508235 EVLQ9UI08 416 aaPredicted RBP15.21■□□□□ 0.03
RNF4-210ENST00000508235 ANKRD36A6QL64 1941 aa15.2■□□□□ 0.02
RNF4-210ENST00000508235 hCG_1818297A0A087WSY0 165 aa15.2■□□□□ 0.02
RNF4-210ENST00000508235 BCLAF3A2AJT9 711 aaKnown RBP15.2■□□□□ 0.02
RNF4-210ENST00000508235 PLRG1O43660 514 aaKnown RBP15.2■□□□□ 0.02
RNF4-210ENST00000508235 FTCDO95954 541 aa15.2■□□□□ 0.02
RNF4-210ENST00000508235 PEX11BO96011 259 aa15.2■□□□□ 0.02
RNF4-210ENST00000508235 KRT10P13645 584 aa15.2■□□□□ 0.02
RNF4-210ENST00000508235 PTPN7P35236 360 aa15.2■□□□□ 0.02
RNF4-210ENST00000508235 MPLP40238 635 aa15.2■□□□□ 0.02
RNF4-210ENST00000508235 PTGER3P43115 390 aa15.2■□□□□ 0.02
RNF4-210ENST00000508235 PEX5P50542 639 aa15.2■□□□□ 0.02
RNF4-210ENST00000508235 ADPRHP54922 357 aa15.2■□□□□ 0.02
RNF4-210ENST00000508235 AP1S1P61966 158 aa15.2■□□□□ 0.02
RNF4-210ENST00000508235 PPIDQ08752 370 aaKnown RBP15.2■□□□□ 0.02
RNF4-210ENST00000508235 CNTN1Q12860 1018 aa15.2■□□□□ 0.02
RNF4-210ENST00000508235 SLC10A2Q12908 348 aaPredicted RBP15.2■□□□□ 0.02
RNF4-210ENST00000508235 POM121L1PQ3SYA9 428 aa15.2■□□□□ 0.02
RNF4-210ENST00000508235 AGBL4Q5VU57 503 aa15.2■□□□□ 0.02
RNF4-210ENST00000508235 KIAA0895LQ68EN5 471 aa15.2■□□□□ 0.02
RNF4-210ENST00000508235 SRLQ86TD4 932 aa15.2■□□□□ 0.02
RNF4-210ENST00000508235 SYT12Q8IV01 421 aa15.2■□□□□ 0.02
RNF4-210ENST00000508235 CCDC13Q8IYE1 715 aa15.2■□□□□ 0.02
RNF4-210ENST00000508235 TSEN2Q8NCE0 465 aaKnown RBP15.2■□□□□ 0.02
RNF4-210ENST00000508235 TRIM58Q8NG06 486 aa15.2■□□□□ 0.02
RNF4-210ENST00000508235 RAB7BQ96AH8 199 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 1166.5 ms