RNA–Protein interactions for RNA: ENST00000506909.5

PDCD6-204, Transcript of programmed cell death 6, humanhuman

TSL 3

Gene PDCD6, Length 458 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-204ENST00000506909 TBC1D3KA0A087X1G2 549 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 A0A1W2PPC4 97 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 TBC1D3FA6NER0 549 aaPredicted RBP13.78□□□□□ -0.2
PDCD6-204ENST00000506909 TBC1D3LB9A6J9 549 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 J3KR12 359 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 RNF103O00237 685 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 CDX4O14627 284 aaPredicted RBP13.78□□□□□ -0.2
PDCD6-204ENST00000506909 BCAT2O15382 392 aaPredicted RBP13.78□□□□□ -0.2
PDCD6-204ENST00000506909 FSBPO95073 299 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 TBC1D3HP0C7X1 549 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 ENGP17813 658 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 ITGB7P26010 798 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 SERPINB6P35237 376 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 SLC1A1P43005 524 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 RAD51Q06609 339 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 IL10RBQ08334 325 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 KRT81Q14533 505 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 CYTH1Q15438 398 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 MYLK3Q32MK0 819 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 POM121L1PQ3SYA9 428 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 PIP5KL1Q5T9C9 394 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 STPG1Q5TH74 334 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 TBC1D3GQ6DHY5 549 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 TBC1D3CQ6IPX1 549 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 NEK5Q6P3R8 708 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 ERN2Q76MJ5 926 aaKnown RBP13.78□□□□□ -0.2
PDCD6-204ENST00000506909 MAP7D3Q8IWC1 876 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 TBC1D3Q8IZP1 549 aaPredicted RBP13.78□□□□□ -0.2
PDCD6-204ENST00000506909 GRIN3AQ8TCU5 1115 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 SNX19Q92543 992 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 VOPP1Q96AW1 172 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 GDAP1L1Q96MZ0 367 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 ORAI3Q9BRQ5 295 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 OSBPL1AQ9BXW6 950 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 HDAC8Q9BY41 377 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 MIR1-1HGQ9H1L0 117 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 ETNK2Q9NVF9 386 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 MFHAS1Q9Y4C4 1052 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 PCDHA13Q9Y5I0 950 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 ATRXP46100 2492 aa13.78□□□□□ -0.2
PDCD6-204ENST00000506909 A0A0A6YYK5 440 aaPredicted RBP13.77□□□□□ -0.21
PDCD6-204ENST00000506909 DFFAO00273 331 aa13.77□□□□□ -0.21
PDCD6-204ENST00000506909 ARHGAP33O14559 1287 aa13.77□□□□□ -0.21
PDCD6-204ENST00000506909 LATO43561 262 aa13.77□□□□□ -0.21
PDCD6-204ENST00000506909 NDUFA10O95299 355 aa13.77□□□□□ -0.21
PDCD6-204ENST00000506909 IGSF6O95976 241 aa13.77□□□□□ -0.21
PDCD6-204ENST00000506909 SYPP08247 313 aa13.77□□□□□ -0.21
PDCD6-204ENST00000506909 CD48P09326 243 aa13.77□□□□□ -0.21
PDCD6-204ENST00000506909 NUDT1P36639 197 aa13.77□□□□□ -0.21
PDCD6-204ENST00000506909 TAS2R38P59533 333 aa13.77□□□□□ -0.21
PDCD6-204ENST00000506909 RHOAP61586 193 aa13.77□□□□□ -0.21
PDCD6-204ENST00000506909 MMRN1Q13201 1228 aa13.77□□□□□ -0.21
PDCD6-204ENST00000506909 DPYSL3Q14195 570 aa13.77□□□□□ -0.21
PDCD6-204ENST00000506909 RFTN1Q14699 578 aaPredicted RBP13.77□□□□□ -0.21
PDCD6-204ENST00000506909 GRM3Q14832 879 aa13.77□□□□□ -0.21
PDCD6-204ENST00000506909 LRRC38Q5VT99 294 aa13.77□□□□□ -0.21
PDCD6-204ENST00000506909 TRIM69Q86WT6 500 aa13.77□□□□□ -0.21
PDCD6-204ENST00000506909 VSIG1Q86XK7 387 aa13.77□□□□□ -0.21
PDCD6-204ENST00000506909 RYBPQ8N488 228 aaPredicted RBP13.77□□□□□ -0.21
PDCD6-204ENST00000506909 ZCCHC9Q8N567 271 aaKnown RBP13.77□□□□□ -0.21
PDCD6-204ENST00000506909 KCTD6Q8NC69 237 aa13.77□□□□□ -0.21
PDCD6-204ENST00000506909 ZNF599Q96NL3 588 aa13.77□□□□□ -0.21
PDCD6-204ENST00000506909 ZNF670Q9BS34 389 aa13.77□□□□□ -0.21
PDCD6-204ENST00000506909 CPEB1Q9BZB8 566 aaKnown RBP13.77□□□□□ -0.21
PDCD6-204ENST00000506909 ZDHHC5Q9C0B5 715 aa13.77□□□□□ -0.21
PDCD6-204ENST00000506909 ZDHHC6Q9H6R6 413 aa13.77□□□□□ -0.21
PDCD6-204ENST00000506909 PREBQ9HCU5 417 aa13.77□□□□□ -0.21
PDCD6-204ENST00000506909 TMEM9BQ9NQ34 198 aa13.77□□□□□ -0.21
PDCD6-204ENST00000506909 LHX3Q9UBR4 397 aa13.77□□□□□ -0.21
PDCD6-204ENST00000506909 IPO11Q9UI26 975 aaKnown RBP13.77□□□□□ -0.21
PDCD6-204ENST00000506909 SOWAHDA6NJG2 315 aa13.76□□□□□ -0.21
PDCD6-204ENST00000506909 TMEM110-MUSTN1A8MSY1 372 aa13.76□□□□□ -0.21
PDCD6-204ENST00000506909 ZNF487B1APH4 448 aa13.76□□□□□ -0.21
PDCD6-204ENST00000506909 KRIT1O00522 736 aa13.76□□□□□ -0.21
PDCD6-204ENST00000506909 TM4SF5O14894 197 aa13.76□□□□□ -0.21
PDCD6-204ENST00000506909 PALMO75781 387 aa13.76□□□□□ -0.21
PDCD6-204ENST00000506909 GJC1P36383 396 aa13.76□□□□□ -0.21
PDCD6-204ENST00000506909 CSNK1DP48730 415 aa13.76□□□□□ -0.21
PDCD6-204ENST00000506909 AFF3P51826 1226 aaKnown RBP13.76□□□□□ -0.21
PDCD6-204ENST00000506909 NEK3P51956 506 aa13.76□□□□□ -0.21
PDCD6-204ENST00000506909 NSUN2Q08J23 767 aaKnown RBP eCLIP13.76□□□□□ -0.21
PDCD6-204ENST00000506909 PAFAH1B3Q15102 231 aaKnown RBP13.76□□□□□ -0.21
PDCD6-204ENST00000506909 ANKRD20A8PQ5CZ79 823 aa13.76□□□□□ -0.21
PDCD6-204ENST00000506909 ZNF805Q5CZA5 627 aa13.76□□□□□ -0.21
PDCD6-204ENST00000506909 ATXN7L2Q5T6C5 722 aaPredicted RBP13.76□□□□□ -0.21
PDCD6-204ENST00000506909 TMCO4Q5TGY1 634 aa13.76□□□□□ -0.21
PDCD6-204ENST00000506909 ARHGAP36Q6ZRI8 547 aa13.76□□□□□ -0.21
PDCD6-204ENST00000506909 PRPF39Q86UA1 669 aaKnown RBP13.76□□□□□ -0.21
PDCD6-204ENST00000506909 LRRC49Q8IUZ0 686 aa13.76□□□□□ -0.21
PDCD6-204ENST00000506909 TP53INP2Q8IXH6 220 aa13.76□□□□□ -0.21
PDCD6-204ENST00000506909 OR6K2Q8NGY2 324 aa13.76□□□□□ -0.21
PDCD6-204ENST00000506909 RAB7BQ96AH8 199 aa13.76□□□□□ -0.21
PDCD6-204ENST00000506909 FAF2Q96CS3 445 aa13.76□□□□□ -0.21
PDCD6-204ENST00000506909 CALN1Q9BXU9 219 aa13.76□□□□□ -0.21
PDCD6-204ENST00000506909 EBF2Q9HAK2 575 aa13.76□□□□□ -0.21
PDCD6-204ENST00000506909 SP110Q9HB58 689 aa13.76□□□□□ -0.21
PDCD6-204ENST00000506909 CNOT1A5YKK6 2376 aaKnown RBP13.76□□□□□ -0.21
PDCD6-204ENST00000506909 CHD6Q8TD26 2715 aa13.75□□□□□ -0.21
PDCD6-204ENST00000506909 C4orf47A7E2U8 309 aa13.75□□□□□ -0.21
PDCD6-204ENST00000506909 AP1G1O43747 822 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms