RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 RYBPQ8N488 228 aaPredicted RBP18.52■□□□□ 0.56
PDLIM7-216ENST00000506537 ATPAF2Q8N5M1 289 aa18.52■□□□□ 0.56
PDLIM7-216ENST00000506537 PLD5Q8N7P1 536 aa18.52■□□□□ 0.56
PDLIM7-216ENST00000506537 OR2T34Q8NGX1 318 aa18.52■□□□□ 0.56
PDLIM7-216ENST00000506537 OR14C36Q8NHC7 312 aa18.52■□□□□ 0.56
PDLIM7-216ENST00000506537 DNASE2BQ8WZ79 361 aa18.52■□□□□ 0.56
PDLIM7-216ENST00000506537 RNF157Q96PX1 679 aa18.52■□□□□ 0.56
PDLIM7-216ENST00000506537 RXFP3Q9NSD7 469 aa18.52■□□□□ 0.56
PDLIM7-216ENST00000506537 DDX56Q9NY93 547 aaKnown RBP18.52■□□□□ 0.56
PDLIM7-216ENST00000506537 EVLQ9UI08 416 aaPredicted RBP18.52■□□□□ 0.56
PDLIM7-216ENST00000506537 FAM47DPA6NHR8 397 aa18.51■□□□□ 0.55
PDLIM7-216ENST00000506537 KRIT1O00522 736 aa18.51■□□□□ 0.55
PDLIM7-216ENST00000506537 MUSKO15146 869 aa18.51■□□□□ 0.55
PDLIM7-216ENST00000506537 SLC7A4O43246 635 aa18.51■□□□□ 0.55
PDLIM7-216ENST00000506537 PLRG1O43660 514 aaKnown RBP18.51■□□□□ 0.55
PDLIM7-216ENST00000506537 ITGB7P26010 798 aa18.51■□□□□ 0.55
PDLIM7-216ENST00000506537 PPP2CBP62714 309 aa18.51■□□□□ 0.55
PDLIM7-216ENST00000506537 PPP2CAP67775 309 aa18.51■□□□□ 0.55
PDLIM7-216ENST00000506537 GBE1Q04446 702 aa18.51■□□□□ 0.55
PDLIM7-216ENST00000506537 SLC10A7Q0GE19 358 aa18.51■□□□□ 0.55
PDLIM7-216ENST00000506537 GALNT2Q10471 571 aa18.51■□□□□ 0.55
PDLIM7-216ENST00000506537 SLC10A2Q12908 348 aaPredicted RBP18.51■□□□□ 0.55
PDLIM7-216ENST00000506537 KIAA0895LQ68EN5 471 aa18.51■□□□□ 0.55
PDLIM7-216ENST00000506537 MFSD7Q6UXD7 560 aa18.51■□□□□ 0.55
PDLIM7-216ENST00000506537 PARS2Q7L3T8 475 aaKnown RBP18.51■□□□□ 0.55
PDLIM7-216ENST00000506537 LRRC57Q8N9N7 239 aa18.51■□□□□ 0.55
PDLIM7-216ENST00000506537 TSEN2Q8NCE0 465 aaKnown RBP18.51■□□□□ 0.55
PDLIM7-216ENST00000506537 KRT35Q92764 455 aa18.51■□□□□ 0.55
PDLIM7-216ENST00000506537 RNF25Q96BH1 459 aaPredicted RBP18.51■□□□□ 0.55
PDLIM7-216ENST00000506537 BIRC7Q96CA5 298 aa18.51■□□□□ 0.55
PDLIM7-216ENST00000506537 ORAI3Q9BRQ5 295 aa18.51■□□□□ 0.55
PDLIM7-216ENST00000506537 HDAC8Q9BY41 377 aa18.51■□□□□ 0.55
PDLIM7-216ENST00000506537 ADGRG1Q9Y653 693 aa18.51■□□□□ 0.55
PDLIM7-216ENST00000506537 SHROOM3Q8TF72 1996 aa18.51■□□□□ 0.55
PDLIM7-216ENST00000506537 PCDH15Q96QU1 1955 aa18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 GRID2IPA4D2P6 1211 aa18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 LRRC72A6NJI9 287 aa18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 GJB3O75712 270 aa18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 PALMO75781 387 aa18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 FSBPO95073 299 aa18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 POP4O95707 220 aaKnown RBP18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 UGT2B4P06133 528 aa18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 HOXD12P35452 270 aa18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 CCZ1BP86790 482 aa18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 CCZ1P86791 482 aaPredicted RBP18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 LBRQ14739 615 aaKnown RBP18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 TAZQ16635 292 aa18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 WDR45BQ5MNZ6 344 aa18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 SYCP2LQ5T4T6 812 aa18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 TMCO4Q5TGY1 634 aa18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 SLC9A4Q6AI14 798 aa18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 ERN2Q76MJ5 926 aaKnown RBP18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 LRRC8AQ8IWT6 810 aa18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 RGL4Q8IZJ4 473 aa18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 GPR161Q8N6U8 529 aaKnown RBP18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 C1orf216Q8TAB5 229 aa18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 LRRN4Q8WUT4 740 aa18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 SNX19Q92543 992 aa18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 PPP1R16AQ96I34 528 aa18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 NSMCE3Q96MG7 304 aa18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 ZNF599Q96NL3 588 aa18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 EBF2Q9HAK2 575 aa18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 DTLQ9NZJ0 730 aa18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 EIF2B4Q9UI10 523 aaKnown RBP18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 CEP250Q9BV73 2442 aa18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 PLXNA2O75051 1894 aa18.5■□□□□ 0.55
PDLIM7-216ENST00000506537 MACROD2A1Z1Q3 448 aa18.49■□□□□ 0.55
PDLIM7-216ENST00000506537 ARHGAP6O43182 974 aa18.49■□□□□ 0.55
PDLIM7-216ENST00000506537 GDF9O60383 454 aa18.49■□□□□ 0.55
PDLIM7-216ENST00000506537 GARSP41250 739 aaKnown RBP18.49■□□□□ 0.55
PDLIM7-216ENST00000506537 DPP6P42658 865 aa18.49■□□□□ 0.55
PDLIM7-216ENST00000506537 CDKN2BP42772 138 aa18.49■□□□□ 0.55
PDLIM7-216ENST00000506537 NAP1L1P55209 391 aaKnown RBP18.49■□□□□ 0.55
PDLIM7-216ENST00000506537 RFTN1Q14699 578 aaPredicted RBP18.49■□□□□ 0.55
PDLIM7-216ENST00000506537 TRIM61Q5EBN2 209 aa18.49■□□□□ 0.55
PDLIM7-216ENST00000506537 KATNAL2Q8IYT4 538 aa18.49■□□□□ 0.55
PDLIM7-216ENST00000506537 PGBD5Q8N414 524 aa18.49■□□□□ 0.55
PDLIM7-216ENST00000506537 ZCCHC9Q8N567 271 aaKnown RBP18.49■□□□□ 0.55
PDLIM7-216ENST00000506537 CCDC112Q8NEF3 446 aa18.49■□□□□ 0.55
PDLIM7-216ENST00000506537 LRIG1Q96JA1 1093 aa18.49■□□□□ 0.55
PDLIM7-216ENST00000506537 CALR3Q96L12 384 aaKnown RBP18.49■□□□□ 0.55
PDLIM7-216ENST00000506537 KLHL32Q96NJ5 620 aa18.49■□□□□ 0.55
PDLIM7-216ENST00000506537 CINPQ9BW66 212 aaPredicted RBP18.49■□□□□ 0.55
PDLIM7-216ENST00000506537 FSCN3Q9NQT6 498 aa18.49■□□□□ 0.55
PDLIM7-216ENST00000506537 DYRK4Q9NR20 520 aa18.49■□□□□ 0.55
PDLIM7-216ENST00000506537 PI4KAP42356 2102 aa18.49■□□□□ 0.55
PDLIM7-216ENST00000506537 LNP1A1A4G5 178 aa18.48■□□□□ 0.55
PDLIM7-216ENST00000506537 SPINT1O43278 529 aa18.48■□□□□ 0.55
PDLIM7-216ENST00000506537 PIGNO95427 931 aa18.48■□□□□ 0.55
PDLIM7-216ENST00000506537 ADRB3P13945 408 aa18.48■□□□□ 0.55
PDLIM7-216ENST00000506537 CTNNA1P35221 906 aaKnown RBP18.48■□□□□ 0.55
PDLIM7-216ENST00000506537 ABL2P42684 1182 aa18.48■□□□□ 0.55
PDLIM7-216ENST00000506537 NEK3P51956 506 aa18.48■□□□□ 0.55
PDLIM7-216ENST00000506537 IRX4P78413 519 aa18.48■□□□□ 0.55
PDLIM7-216ENST00000506537 KIF5AQ12840 1032 aa18.48■□□□□ 0.55
PDLIM7-216ENST00000506537 ZNF805Q5CZA5 627 aa18.48■□□□□ 0.55
PDLIM7-216ENST00000506537 SLC23A3Q6PIS1 610 aa18.48■□□□□ 0.55
PDLIM7-216ENST00000506537 NPNTQ6UXI9 565 aa18.48■□□□□ 0.55
PDLIM7-216ENST00000506537 GDPD4Q6W3E5 623 aa18.48■□□□□ 0.55
PDLIM7-216ENST00000506537 SPOCD1Q6ZMY3 1216 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms