RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 CLEC4CQ8WTT0 213 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 GOLGA1Q92805 767 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 PMEPA1Q969W9 287 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 DHX58Q96C10 678 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 CYFIP2Q96F07 1278 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 AK8Q96MA6 479 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 SLC46A1Q96NT5 459 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 DUSP9Q99956 384 aaKnown RBP3.74□□□□□ -1.81
USP46-205ENST00000504078 CCDC3Q9BQI4 270 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 DPH1Q9BZG8 443 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 DCLK3Q9C098 648 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 BLZF1Q9H2G9 400 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 SLC39A2Q9NP94 309 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 ARHGAP20Q9P2F6 1191 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 SLCO3A1Q9UIG8 710 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 FZD4Q9ULV1 537 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 ERVW-1Q9UQF0 538 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 ITM2BQ9Y287 266 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 SLC5A6Q9Y289 635 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 DOCK9Q9BZ29 2069 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 UBR5O95071 2799 aaPredicted RBP3.73□□□□□ -1.81
USP46-205ENST00000504078 SYNJ2BP-COX16A0A087WUM0 186 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 CCDC187A0A096LP49 1063 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 EDDM13A0A1B0GTR0 161 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 POM121BA6NF01 834 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 YJEFN3A6XGL0 299 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 E7ENQ6 273 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 RAD51BO15315 384 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 MTSS1O43312 755 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 EPB41L2O43491 1005 aaKnown RBP3.73□□□□□ -1.81
USP46-205ENST00000504078 LATO43561 262 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 PLRG1O43660 514 aaKnown RBP3.73□□□□□ -1.81
USP46-205ENST00000504078 STX6O43752 255 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 DUX1O43812 170 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 NOBOXO60393 691 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 EIF4EBP3O60516 100 aaPredicted RBP3.73□□□□□ -1.81
USP46-205ENST00000504078 ENDOD1O94919 500 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 LUC7L3O95232 432 aaKnown RBP3.73□□□□□ -1.81
USP46-205ENST00000504078 C4BPAP04003 597 aaKnown RBP3.73□□□□□ -1.81
USP46-205ENST00000504078 CDK4P11802 303 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 GOT1P17174 413 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 C5AR1P21730 350 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 SCP2P22307 547 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 ATICP31939 592 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 GCLMP48507 274 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 HARS2P49590 506 aaKnown RBP3.73□□□□□ -1.81
USP46-205ENST00000504078 DUSP3P51452 185 aaPredicted RBP3.73□□□□□ -1.81
USP46-205ENST00000504078 POLE2P56282 527 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 TAS2R38P59533 333 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 COG7P83436 770 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 E2F1Q01094 437 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 ZBTB16Q05516 673 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 ALCAMQ13740 583 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 SPIDRQ14159 915 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 FGL2Q14314 439 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 STAT4Q14765 748 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 NR0B2Q15466 257 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 ARL13BQ3SXY8 428 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 ACCSLQ4AC99 568 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 SETMARQ53H47 684 aaPredicted RBP3.73□□□□□ -1.81
USP46-205ENST00000504078 ATP1A1-AS1Q5TC04 95 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 PIK3R6Q5UE93 754 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 RAP1GAP2Q684P5 730 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 KLHDC10Q6PID8 442 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 LCNL1Q6ZST4 164 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 TMPRSS9Q7Z410 1059 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 ZAR1Q86SH2 424 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 CLEC14AQ86T13 490 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 TADA2BQ86TJ2 420 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 SFTPA2Q8IWL1 248 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 FAM217AQ8IXS0 508 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 LGI2Q8N0V4 545 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 LSMEM2Q8N112 164 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 FBXO39Q8N4B4 442 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 ARL14Q8N4G2 192 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 MFSD2AQ8NA29 543 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 TMEM145Q8NBT3 493 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 HJURPQ8NCD3 748 aaPredicted RBP3.73□□□□□ -1.81
USP46-205ENST00000504078 UBA3Q8TBC4 463 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 ZNF564Q8TBZ8 553 aaPredicted RBP3.73□□□□□ -1.81
USP46-205ENST00000504078 RNF139Q8WU17 664 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 SNRNP27Q8WVK2 155 aaKnown RBP3.73□□□□□ -1.81
USP46-205ENST00000504078 PTPRN2Q92932 1015 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 CCDC74AQ96AQ1 378 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 TMA16Q96EY4 203 aaKnown RBP3.73□□□□□ -1.81
USP46-205ENST00000504078 LMLNQ96KR4 655 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 IPO9Q96P70 1041 aaKnown RBP3.73□□□□□ -1.81
USP46-205ENST00000504078 FAM129BQ96TA1 746 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 NT5C1AQ9BXI3 368 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 SLC2A11Q9BYW1 496 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 CPEB1Q9BZB8 566 aaKnown RBP3.73□□□□□ -1.81
USP46-205ENST00000504078 NIF3L1Q9GZT8 377 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 SUDS3Q9H7L9 328 aaPredicted RBP3.73□□□□□ -1.81
USP46-205ENST00000504078 ERVMER34-1Q9H9K5 563 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 FBRSQ9HAH7 460 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 LRRC4CQ9HCJ2 640 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 COMMD8Q9NX08 183 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 FAM53CQ9NYF3 392 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 NLGN3Q9NZ94 848 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 COX16Q9P0S2 106 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms