RNA–Protein interactions for RNA: ENST00000502557.5

CCHCR1-216, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-216ENST00000502557 SAE1Q9UBE0 346 aaPredicted RBP18.09■□□□□ 0.49
CCHCR1-216ENST00000502557 EVLQ9UI08 416 aaPredicted RBP18.09■□□□□ 0.49
CCHCR1-216ENST00000502557 NCKAP1Q9Y2A7 1128 aa18.09■□□□□ 0.49
CCHCR1-216ENST00000502557 EFR3BQ9Y2G0 817 aa18.09■□□□□ 0.49
CCHCR1-216ENST00000502557 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.08■□□□□ 0.48
CCHCR1-216ENST00000502557 MATN3O15232 486 aa18.08■□□□□ 0.48
CCHCR1-216ENST00000502557 ACSL1P33121 698 aa18.08■□□□□ 0.48
CCHCR1-216ENST00000502557 CSNK1DP48730 415 aa18.08■□□□□ 0.48
CCHCR1-216ENST00000502557 NR2C2P49116 596 aa18.08■□□□□ 0.48
CCHCR1-216ENST00000502557 RPL6Q02878 288 aaKnown RBP18.08■□□□□ 0.48
CCHCR1-216ENST00000502557 PPIDQ08752 370 aaKnown RBP18.08■□□□□ 0.48
CCHCR1-216ENST00000502557 CNTN1Q12860 1018 aa18.08■□□□□ 0.48
CCHCR1-216ENST00000502557 HNRNPDQ14103 355 aaKnown RBP18.08■□□□□ 0.48
CCHCR1-216ENST00000502557 ZNF235Q14590 738 aa18.08■□□□□ 0.48
CCHCR1-216ENST00000502557 ELF2Q15723 593 aa18.08■□□□□ 0.48
CCHCR1-216ENST00000502557 MARC1Q5VT66 337 aa18.08■□□□□ 0.48
CCHCR1-216ENST00000502557 TIGD7Q6NT04 549 aaPredicted RBP18.08■□□□□ 0.48
CCHCR1-216ENST00000502557 LPCAT2Q7L5N7 544 aa18.08■□□□□ 0.48
CCHCR1-216ENST00000502557 CCDC13Q8IYE1 715 aa18.08■□□□□ 0.48
CCHCR1-216ENST00000502557 TMEFF1Q8IYR6 380 aa18.08■□□□□ 0.48
CCHCR1-216ENST00000502557 PGBD5Q8N414 524 aa18.08■□□□□ 0.48
CCHCR1-216ENST00000502557 TEX26Q8N6G2 289 aa18.08■□□□□ 0.48
CCHCR1-216ENST00000502557 CCNYQ8ND76 341 aa18.08■□□□□ 0.48
CCHCR1-216ENST00000502557 TRIM58Q8NG06 486 aa18.08■□□□□ 0.48
CCHCR1-216ENST00000502557 NSMCE1Q8WV22 266 aa18.08■□□□□ 0.48
CCHCR1-216ENST00000502557 FAM131CQ96AQ9 280 aa18.08■□□□□ 0.48
CCHCR1-216ENST00000502557 ZNF419Q96HQ0 510 aaPredicted RBP18.08■□□□□ 0.48
CCHCR1-216ENST00000502557 LRIG1Q96JA1 1093 aa18.08■□□□□ 0.48
CCHCR1-216ENST00000502557 BTBD1Q9H0C5 482 aa18.08■□□□□ 0.48
CCHCR1-216ENST00000502557 TRMT1Q9NXH9 659 aaKnown RBP18.08■□□□□ 0.48
CCHCR1-216ENST00000502557 RAB23Q9ULC3 237 aa18.08■□□□□ 0.48
CCHCR1-216ENST00000502557 FZD4Q9ULV1 537 aa18.08■□□□□ 0.48
CCHCR1-216ENST00000502557 PYCARDQ9ULZ3 195 aa18.08■□□□□ 0.48
CCHCR1-216ENST00000502557 MUC6Q6W4X9 2439 aa18.08■□□□□ 0.48
CCHCR1-216ENST00000502557 CKAP5Q14008 2032 aa18.07■□□□□ 0.48
CCHCR1-216ENST00000502557 NDUFS2O75306 463 aa18.07■□□□□ 0.48
CCHCR1-216ENST00000502557 RHOBTB1O94844 696 aa18.07■□□□□ 0.48
CCHCR1-216ENST00000502557 CETN2P41208 172 aa18.07■□□□□ 0.48
CCHCR1-216ENST00000502557 MMP13P45452 471 aa18.07■□□□□ 0.48
CCHCR1-216ENST00000502557 RENBPP51606 427 aa18.07■□□□□ 0.48
CCHCR1-216ENST00000502557 RAD51Q06609 339 aa18.07■□□□□ 0.48
CCHCR1-216ENST00000502557 NSUN2Q08J23 767 aaKnown RBP eCLIP18.07■□□□□ 0.48
CCHCR1-216ENST00000502557 LAIR1Q6GTX8 287 aa18.07■□□□□ 0.48
CCHCR1-216ENST00000502557 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.07■□□□□ 0.48
CCHCR1-216ENST00000502557 SRLQ86TD4 932 aa18.07■□□□□ 0.48
CCHCR1-216ENST00000502557 DEFB119Q8N690 84 aa18.07■□□□□ 0.48
CCHCR1-216ENST00000502557 HAUS1Q96CS2 278 aa18.07■□□□□ 0.48
CCHCR1-216ENST00000502557 GPR174Q9BXC1 333 aa18.07■□□□□ 0.48
CCHCR1-216ENST00000502557 CPEB1Q9BZB8 566 aaKnown RBP18.07■□□□□ 0.48
CCHCR1-216ENST00000502557 SGK2Q9HBY8 427 aa18.07■□□□□ 0.48
CCHCR1-216ENST00000502557 PPP1R12AO14974 1030 aaPredicted RBP18.06■□□□□ 0.48
CCHCR1-216ENST00000502557 GJB3O75712 270 aa18.06■□□□□ 0.48
CCHCR1-216ENST00000502557 UGT2B4P06133 528 aa18.06■□□□□ 0.48
CCHCR1-216ENST00000502557 CCNB1P14635 433 aa18.06■□□□□ 0.48
CCHCR1-216ENST00000502557 CR2P20023 1033 aa18.06■□□□□ 0.48
CCHCR1-216ENST00000502557 ITGB7P26010 798 aa18.06■□□□□ 0.48
CCHCR1-216ENST00000502557 HSPA9P38646 679 aaKnown RBP18.06■□□□□ 0.48
CCHCR1-216ENST00000502557 ZNF33AQ06730 810 aa18.06■□□□□ 0.48
CCHCR1-216ENST00000502557 RPS6KA1Q15418 735 aa18.06■□□□□ 0.48
CCHCR1-216ENST00000502557 AGBL4Q5VU57 503 aa18.06■□□□□ 0.48
CCHCR1-216ENST00000502557 GDPD4Q6W3E5 623 aa18.06■□□□□ 0.48
CCHCR1-216ENST00000502557 B4GALNT4Q76KP1 1039 aa18.06■□□□□ 0.48
CCHCR1-216ENST00000502557 BZW1Q7L1Q6 419 aaKnown RBP18.06■□□□□ 0.48
CCHCR1-216ENST00000502557 BBS5Q8N3I7 341 aa18.06■□□□□ 0.48
CCHCR1-216ENST00000502557 P3H4Q92791 437 aa18.06■□□□□ 0.48
CCHCR1-216ENST00000502557 PPP1R16AQ96I34 528 aa18.06■□□□□ 0.48
CCHCR1-216ENST00000502557 LOXL4Q96JB6 756 aa18.06■□□□□ 0.48
CCHCR1-216ENST00000502557 NSMCE3Q96MG7 304 aa18.06■□□□□ 0.48
CCHCR1-216ENST00000502557 MGME1Q9BQP7 344 aa18.06■□□□□ 0.48
CCHCR1-216ENST00000502557 OSBPL1AQ9BXW6 950 aa18.06■□□□□ 0.48
CCHCR1-216ENST00000502557 HDAC8Q9BY41 377 aa18.06■□□□□ 0.48
CCHCR1-216ENST00000502557 BRD8Q9H0E9 1235 aa18.06■□□□□ 0.48
CCHCR1-216ENST00000502557 NT5MQ9NPB1 228 aa18.06■□□□□ 0.48
CCHCR1-216ENST00000502557 DYRK4Q9NR20 520 aa18.06■□□□□ 0.48
CCHCR1-216ENST00000502557 TTC24A2A3L6 582 aaPredicted RBP18.05■□□□□ 0.48
CCHCR1-216ENST00000502557 PRR23AA6NEV1 266 aa18.05■□□□□ 0.48
CCHCR1-216ENST00000502557 USP27XA6NNY8 438 aa18.05■□□□□ 0.48
CCHCR1-216ENST00000502557 APOC4-APOC2K7ER74 178 aa18.05■□□□□ 0.48
CCHCR1-216ENST00000502557 KCNK1O00180 336 aa18.05■□□□□ 0.48
CCHCR1-216ENST00000502557 SLC7A4O43246 635 aa18.05■□□□□ 0.48
CCHCR1-216ENST00000502557 PIGNO95427 931 aa18.05■□□□□ 0.48
CCHCR1-216ENST00000502557 SEMA4FO95754 770 aa18.05■□□□□ 0.48
CCHCR1-216ENST00000502557 APOC2P02655 101 aa18.05■□□□□ 0.48
CCHCR1-216ENST00000502557 PTGER3P43115 390 aa18.05■□□□□ 0.48
CCHCR1-216ENST00000502557 DHPSP49366 369 aaPredicted RBP18.05■□□□□ 0.48
CCHCR1-216ENST00000502557 SCNN1BP51168 640 aa18.05■□□□□ 0.48
CCHCR1-216ENST00000502557 ADPRHP54922 357 aa18.05■□□□□ 0.48
CCHCR1-216ENST00000502557 MAXP61244 160 aa18.05■□□□□ 0.48
CCHCR1-216ENST00000502557 IFI35P80217 286 aaPredicted RBP18.05■□□□□ 0.48
CCHCR1-216ENST00000502557 AP1B1Q10567 949 aa18.05■□□□□ 0.48
CCHCR1-216ENST00000502557 PRKD1Q15139 912 aaPredicted RBP18.05■□□□□ 0.48
CCHCR1-216ENST00000502557 ZNF805Q5CZA5 627 aa18.05■□□□□ 0.48
CCHCR1-216ENST00000502557 SPDYCQ5MJ68 293 aa18.05■□□□□ 0.48
CCHCR1-216ENST00000502557 PIP5KL1Q5T9C9 394 aa18.05■□□□□ 0.48
CCHCR1-216ENST00000502557 CCDC181Q5TID7 509 aa18.05■□□□□ 0.48
CCHCR1-216ENST00000502557 ERN2Q76MJ5 926 aaKnown RBP18.05■□□□□ 0.48
CCHCR1-216ENST00000502557 PARS2Q7L3T8 475 aaKnown RBP18.05■□□□□ 0.48
CCHCR1-216ENST00000502557 ARMCX6Q7L4S7 300 aa18.05■□□□□ 0.48
CCHCR1-216ENST00000502557 ASCL5Q7RTU5 278 aa18.05■□□□□ 0.48
CCHCR1-216ENST00000502557 SLC41A1Q8IVJ1 513 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms