RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 ATOH1Q92858 354 aaPredicted RBP3.87□□□□□ -1.79
CALD1-224ENST00000498254 REPS1Q96D71 796 aa3.87□□□□□ -1.79
CALD1-224ENST00000498254 ZNF419Q96HQ0 510 aaPredicted RBP3.87□□□□□ -1.79
CALD1-224ENST00000498254 PDLIM2Q96JY6 352 aa3.87□□□□□ -1.79
CALD1-224ENST00000498254 C1orf74Q96LT6 269 aa3.87□□□□□ -1.79
CALD1-224ENST00000498254 COQ10AQ96MF6 247 aa3.87□□□□□ -1.79
CALD1-224ENST00000498254 ZMAT2Q96NC0 199 aaKnown RBP3.87□□□□□ -1.79
CALD1-224ENST00000498254 KIF9Q9HAQ2 790 aa3.87□□□□□ -1.79
CALD1-224ENST00000498254 ZNF304Q9HCX3 659 aa3.87□□□□□ -1.79
CALD1-224ENST00000498254 ERVK-5Q9HDB9 667 aa3.87□□□□□ -1.79
CALD1-224ENST00000498254 SLC6A13Q9NSD5 602 aa3.87□□□□□ -1.79
CALD1-224ENST00000498254 ATP8A2Q9NTI2 1148 aa3.87□□□□□ -1.79
CALD1-224ENST00000498254 GIMAP2Q9UG22 337 aa3.87□□□□□ -1.79
CALD1-224ENST00000498254 CDH22Q9UJ99 828 aa3.87□□□□□ -1.79
CALD1-224ENST00000498254 ADAM21Q9UKJ8 722 aa3.87□□□□□ -1.79
CALD1-224ENST00000498254 A4GNTQ9UNA3 340 aa3.87□□□□□ -1.79
CALD1-224ENST00000498254 A0A1W2PQF6 199 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 SLC22A23A1A5C7 686 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 GRID2IPA4D2P6 1211 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 DDTLA6NHG4 134 aaPredicted RBP3.86□□□□□ -1.79
CALD1-224ENST00000498254 BTBD19C9JJ37 291 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 UBE2Q2LH0YL09 131 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 H7C1Q1 480 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 BCAT2O15382 392 aaPredicted RBP3.86□□□□□ -1.79
CALD1-224ENST00000498254 PAGE4O60829 102 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 HLA-DQA2P01906 255 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 RB1P06400 928 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 NHLRC4P0CG21 123 aaPredicted RBP3.86□□□□□ -1.79
CALD1-224ENST00000498254 ZNF8P17098 575 aaPredicted RBP3.86□□□□□ -1.79
CALD1-224ENST00000498254 TNFRSF1AP19438 455 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 MAKP20794 623 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 TACR3P29371 465 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 CHRNA5P30532 468 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 TMPRSS3P57727 454 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 YWHAZP63104 245 aaKnown RBP3.86□□□□□ -1.79
CALD1-224ENST00000498254 RNPS1Q15287 305 aaKnown RBP3.86□□□□□ -1.79
CALD1-224ENST00000498254 MIIPQ5JXC2 388 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 GPR139Q6DWJ6 353 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 KIAA0930Q6ICG6 404 aaPredicted RBP3.86□□□□□ -1.79
CALD1-224ENST00000498254 CLEC17AQ6ZS10 378 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 GRASPQ7Z6J2 395 aaPredicted RBP3.86□□□□□ -1.79
CALD1-224ENST00000498254 WDR5BQ86VZ2 330 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 ARHGAP12Q8IWW6 846 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 ADGRF2Q8IZF7 708 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 SCML4Q8N228 414 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 PAQR4Q8N4S7 273 aaPredicted RBP3.86□□□□□ -1.79
CALD1-224ENST00000498254 ARL14EPQ8N8R7 260 aaPredicted RBP3.86□□□□□ -1.79
CALD1-224ENST00000498254 FAR1Q8WVX9 515 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 ZFPM2Q8WW38 1151 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 PSPC1Q8WXF1 523 aaKnown RBP3.86□□□□□ -1.79
CALD1-224ENST00000498254 FAM149B1Q96BN6 582 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 MMABQ96EY8 250 aaPredicted RBP3.86□□□□□ -1.79
CALD1-224ENST00000498254 RITA1Q96K30 269 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 BBC3Q96PG8 261 aaPredicted RBP3.86□□□□□ -1.79
CALD1-224ENST00000498254 SRSF8Q9BRL6 282 aaKnown RBP3.86□□□□□ -1.79
CALD1-224ENST00000498254 EFHD1Q9BUP0 239 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 SCNM1Q9BWG6 230 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 GATA5Q9BWX5 397 aaPredicted RBP3.86□□□□□ -1.79
CALD1-224ENST00000498254 HIPK3Q9H422 1215 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 ZCCHC17Q9NP64 241 aaKnown RBP3.86□□□□□ -1.79
CALD1-224ENST00000498254 GAR1Q9NY12 217 aaKnown RBP3.86□□□□□ -1.79
CALD1-224ENST00000498254 NCKIPSDQ9NZQ3 722 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 PLEKHB1Q9UF11 243 aaPredicted RBP3.86□□□□□ -1.79
CALD1-224ENST00000498254 IPO11Q9UI26 975 aaKnown RBP3.86□□□□□ -1.79
CALD1-224ENST00000498254 ZNF711Q9Y462 761 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 AOX1Q06278 1338 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 SPATA31A5Q5VU36 1347 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 SPATA31A6Q5VVP1 1343 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 SPATA31A7Q8IWB4 1347 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 ADGRF5Q8IZF2 1346 aa3.86□□□□□ -1.79
CALD1-224ENST00000498254 TMEM247A6NEH6 219 aa3.85□□□□□ -1.79
CALD1-224ENST00000498254 TTC36A6NLP5 189 aa3.85□□□□□ -1.79
CALD1-224ENST00000498254 TARM1B6A8C7 271 aa3.85□□□□□ -1.79
CALD1-224ENST00000498254 KCNJ18B7U540 433 aa3.85□□□□□ -1.79
CALD1-224ENST00000498254 NPIPB8E9PQR5 432 aa3.85□□□□□ -1.79
CALD1-224ENST00000498254 POC1B-GALNT4F8VUJ3 575 aa3.85□□□□□ -1.79
CALD1-224ENST00000498254 CTDSP2O14595 271 aa3.85□□□□□ -1.79
CALD1-224ENST00000498254 INPPL1O15357 1258 aa3.85□□□□□ -1.79
CALD1-224ENST00000498254 ADAM20O43506 726 aa3.85□□□□□ -1.79
CALD1-224ENST00000498254 DKC1O60832 514 aaKnown RBP eCLIP3.85□□□□□ -1.79
CALD1-224ENST00000498254 ATP2C2O75185 946 aa3.85□□□□□ -1.79
CALD1-224ENST00000498254 ENTPD3O75355 529 aa3.85□□□□□ -1.79
CALD1-224ENST00000498254 RNF8O76064 485 aa3.85□□□□□ -1.79
CALD1-224ENST00000498254 JTBO76095 146 aa3.85□□□□□ -1.79
CALD1-224ENST00000498254 NKX2-2O95096 273 aa3.85□□□□□ -1.79
CALD1-224ENST00000498254 OR2C1O95371 312 aa3.85□□□□□ -1.79
CALD1-224ENST00000498254 PLAUP00749 431 aa3.85□□□□□ -1.79
CALD1-224ENST00000498254 TUBBP07437 444 aa3.85□□□□□ -1.79
CALD1-224ENST00000498254 HOXA7P31268 230 aaPredicted RBP3.85□□□□□ -1.79
CALD1-224ENST00000498254 UBA7P41226 1012 aa3.85□□□□□ -1.79
CALD1-224ENST00000498254 PIP4K2AP48426 406 aaPredicted RBP3.85□□□□□ -1.79
CALD1-224ENST00000498254 BLKP51451 505 aa3.85□□□□□ -1.79
CALD1-224ENST00000498254 CLCN5P51795 746 aa3.85□□□□□ -1.79
CALD1-224ENST00000498254 MRPL12P52815 198 aaKnown RBP3.85□□□□□ -1.79
CALD1-224ENST00000498254 CLDN2P57739 230 aa3.85□□□□□ -1.79
CALD1-224ENST00000498254 PRAMEP78395 509 aa3.85□□□□□ -1.79
CALD1-224ENST00000498254 ZBED6P86452 979 aa3.85□□□□□ -1.79
CALD1-224ENST00000498254 ZXDAP98168 799 aa3.85□□□□□ -1.79
CALD1-224ENST00000498254 CSTF3Q12996 717 aaKnown RBP3.85□□□□□ -1.79
CALD1-224ENST00000498254 PRPF4BQ13523 1007 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms