RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 SERINC3Q13530 473 aa12.03□□□□□ -0.48
THBS3-208ENST00000496332 SHBQ15464 509 aa12.03□□□□□ -0.48
THBS3-208ENST00000496332 INO80DQ53TQ3 878 aaPredicted RBP12.03□□□□□ -0.48
THBS3-208ENST00000496332 ATXN7L2Q5T6C5 722 aaPredicted RBP12.03□□□□□ -0.48
THBS3-208ENST00000496332 SEL1L3Q68CR1 1132 aa12.03□□□□□ -0.48
THBS3-208ENST00000496332 PARS2Q7L3T8 475 aaKnown RBP12.03□□□□□ -0.48
THBS3-208ENST00000496332 VPS36Q86VN1 386 aa12.03□□□□□ -0.48
THBS3-208ENST00000496332 IQCHQ86VS3 1027 aa12.03□□□□□ -0.48
THBS3-208ENST00000496332 SPATS2Q86XZ4 545 aaKnown RBP12.03□□□□□ -0.48
THBS3-208ENST00000496332 CHCHD4Q8N4Q1 142 aa12.03□□□□□ -0.48
THBS3-208ENST00000496332 NETO2Q8NC67 525 aa12.03□□□□□ -0.48
THBS3-208ENST00000496332 CASKIN2Q8WXE0 1202 aa12.03□□□□□ -0.48
THBS3-208ENST00000496332 IQCDQ96DY2 449 aa12.03□□□□□ -0.48
THBS3-208ENST00000496332 LRIG1Q96JA1 1093 aa12.03□□□□□ -0.48
THBS3-208ENST00000496332 KCTD15Q96SI1 283 aaPredicted RBP12.03□□□□□ -0.48
THBS3-208ENST00000496332 EIF3CQ99613 913 aaKnown RBP12.03□□□□□ -0.48
THBS3-208ENST00000496332 CDC6Q99741 560 aa12.03□□□□□ -0.48
THBS3-208ENST00000496332 MYOCQ99972 504 aa12.03□□□□□ -0.48
THBS3-208ENST00000496332 SNRNP25Q9BV90 132 aaKnown RBP12.03□□□□□ -0.48
THBS3-208ENST00000496332 DONSONQ9NYP3 566 aa12.03□□□□□ -0.48
THBS3-208ENST00000496332 ZFR2Q9UPR6 939 aaKnown RBP12.03□□□□□ -0.48
THBS3-208ENST00000496332 APOBEC2Q9Y235 224 aaKnown RBP12.03□□□□□ -0.48
THBS3-208ENST00000496332 LUC7L2Q9Y383 392 aaKnown RBP12.03□□□□□ -0.48
THBS3-208ENST00000496332 FRYQ5TBA9 3013 aa12.03□□□□□ -0.48
THBS3-208ENST00000496332 SPEGQ15772 3267 aa12.03□□□□□ -0.48
THBS3-208ENST00000496332 C16orf96A6NNT2 1141 aa12.02□□□□□ -0.49
THBS3-208ENST00000496332 DAPK3O43293 454 aa12.02□□□□□ -0.49
THBS3-208ENST00000496332 LRCH4O75427 683 aa12.02□□□□□ -0.49
THBS3-208ENST00000496332 GYPCP04921 128 aa12.02□□□□□ -0.49
THBS3-208ENST00000496332 UGT2B4P06133 528 aa12.02□□□□□ -0.49
THBS3-208ENST00000496332 ARRB1P49407 418 aaPredicted RBP12.02□□□□□ -0.49
THBS3-208ENST00000496332 NDST2P52849 883 aa12.02□□□□□ -0.49
THBS3-208ENST00000496332 RHOAP61586 193 aa12.02□□□□□ -0.49
THBS3-208ENST00000496332 OVGP1Q12889 678 aa12.02□□□□□ -0.49
THBS3-208ENST00000496332 NFKBIBQ15653 356 aa12.02□□□□□ -0.49
THBS3-208ENST00000496332 TMEM259Q4ZIN3 620 aa12.02□□□□□ -0.49
THBS3-208ENST00000496332 ZNF805Q5CZA5 627 aa12.02□□□□□ -0.49
THBS3-208ENST00000496332 PPP6R3Q5H9R7 873 aaPredicted RBP12.02□□□□□ -0.49
THBS3-208ENST00000496332 GDPD4Q6W3E5 623 aa12.02□□□□□ -0.49
THBS3-208ENST00000496332 CYP4V2Q6ZWL3 525 aaPredicted RBP12.02□□□□□ -0.49
THBS3-208ENST00000496332 RAB44Q7Z6P3 723 aaPredicted RBP12.02□□□□□ -0.49
THBS3-208ENST00000496332 SLCO6A1Q86UG4 719 aa12.02□□□□□ -0.49
THBS3-208ENST00000496332 GATAD2AQ86YP4 633 aa12.02□□□□□ -0.49
THBS3-208ENST00000496332 SAP25Q8TEE9 199 aa12.02□□□□□ -0.49
THBS3-208ENST00000496332 VOPP1Q96AW1 172 aa12.02□□□□□ -0.49
THBS3-208ENST00000496332 KLHDC7BQ96G42 594 aa12.02□□□□□ -0.49
THBS3-208ENST00000496332 CELF6Q96J87 481 aaKnown RBP12.02□□□□□ -0.49
THBS3-208ENST00000496332 FEM1CQ96JP0 617 aa12.02□□□□□ -0.49
THBS3-208ENST00000496332 GDAP1L1Q96MZ0 367 aa12.02□□□□□ -0.49
THBS3-208ENST00000496332 KLHL32Q96NJ5 620 aa12.02□□□□□ -0.49
THBS3-208ENST00000496332 NCAPGQ9BPX3 1015 aa12.02□□□□□ -0.49
THBS3-208ENST00000496332 XPO4Q9C0E2 1151 aaKnown RBP12.02□□□□□ -0.49
THBS3-208ENST00000496332 THAP2Q9H0W7 228 aa12.02□□□□□ -0.49
THBS3-208ENST00000496332 LRRC19Q9H756 370 aa12.02□□□□□ -0.49
THBS3-208ENST00000496332 ERVMER34-1Q9H9K5 563 aa12.02□□□□□ -0.49
THBS3-208ENST00000496332 FZD3Q9NPG1 666 aa12.02□□□□□ -0.49
THBS3-208ENST00000496332 KLK13Q9UKR3 277 aa12.02□□□□□ -0.49
THBS3-208ENST00000496332 NEUROG3Q9Y4Z2 214 aa12.02□□□□□ -0.49
THBS3-208ENST00000496332 FADS3Q9Y5Q0 445 aa12.02□□□□□ -0.49
THBS3-208ENST00000496332 PCNX2A6NKB5 2137 aa12.02□□□□□ -0.49
THBS3-208ENST00000496332 TPRP12270 2363 aaKnown RBP12.01□□□□□ -0.49
THBS3-208ENST00000496332 A0A087X0T9 212 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 GOLGA8CPA6NN73 597 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 C1QTNF9BB2RNN3 333 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 J3KR12 359 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 YKT6O15498 198 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 AP1G1O43747 822 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 MAGEC1O60732 1142 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 IGSF6O95976 241 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 TPM3P06753 285 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 ITGAVP06756 1048 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 ATXN1LP0C7T5 689 aaKnown RBP12.01□□□□□ -0.49
THBS3-208ENST00000496332 C1QTNF9P0C862 333 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 FAM228BP0C875 321 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 ERCC2P18074 760 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 HNRNPA2B1P22626 353 aaKnown RBP12.01□□□□□ -0.49
THBS3-208ENST00000496332 AKT2P31751 481 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 CASP14P31944 242 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 PCK1P35558 622 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 PAPOLAP51003 745 aaKnown RBP12.01□□□□□ -0.49
THBS3-208ENST00000496332 RPS21P63220 83 aaKnown RBP12.01□□□□□ -0.49
THBS3-208ENST00000496332 BNIP3Q12983 259 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 MAPK8IP2Q13387 824 aaPredicted RBP12.01□□□□□ -0.49
THBS3-208ENST00000496332 CYTH1Q15438 398 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 ST3GAL2Q16842 350 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 INAVAQ3KP66 663 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 KIAA1161Q6NSJ0 714 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 RFX8Q6ZV50 586 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 PSTKQ8IV42 348 aaKnown RBP12.01□□□□□ -0.49
THBS3-208ENST00000496332 OXR1Q8N573 874 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 TMEM145Q8NBT3 493 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 ADAMTS14Q8WXS8 1223 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 RAB7BQ96AH8 199 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 OSBPL1AQ9BXW6 950 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 SLC17A9Q9BYT1 436 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 SLC39A8Q9C0K1 460 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 PDFQ9HBH1 243 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 TOR4AQ9NXH8 423 aa12.01□□□□□ -0.49
THBS3-208ENST00000496332 UBA2Q9UBT2 640 aaPredicted RBP12.01□□□□□ -0.49
THBS3-208ENST00000496332 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms