RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 HHATQ5VTY9 493 aa16.53■□□□□ 0.24
CBX4-204ENST00000495122 PARM1Q6UWI2 310 aa16.53■□□□□ 0.24
CBX4-204ENST00000495122 MTSS1LQ765P7 747 aa16.53■□□□□ 0.24
CBX4-204ENST00000495122 CTAGE3PQ8IX95 158 aa16.53■□□□□ 0.24
CBX4-204ENST00000495122 NPAS3Q8IXF0 933 aa16.53■□□□□ 0.24
CBX4-204ENST00000495122 TCEAL8Q8IYN2 117 aa16.53■□□□□ 0.24
CBX4-204ENST00000495122 LRRC34Q8IZ02 419 aa16.53■□□□□ 0.24
CBX4-204ENST00000495122 PPM1NQ8N819 430 aa16.53■□□□□ 0.24
CBX4-204ENST00000495122 STKLD1Q8NE28 680 aa16.53■□□□□ 0.24
CBX4-204ENST00000495122 MYRFLQ96LU7 910 aa16.53■□□□□ 0.24
CBX4-204ENST00000495122 RPP25Q9BUL9 199 aaKnown RBP16.53■□□□□ 0.24
CBX4-204ENST00000495122 VPS11Q9H270 941 aa16.53■□□□□ 0.24
CBX4-204ENST00000495122 NSMCE4AQ9NXX6 385 aa16.53■□□□□ 0.24
CBX4-204ENST00000495122 DNMT3LQ9UJW3 386 aa16.53■□□□□ 0.24
CBX4-204ENST00000495122 VANGL2Q9ULK5 521 aa16.53■□□□□ 0.24
CBX4-204ENST00000495122 SNX10Q9Y5X0 201 aa16.53■□□□□ 0.24
CBX4-204ENST00000495122 FAM186AA6NE01 2351 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 DFFAO00273 331 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 SEC24AO95486 1093 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 MOCS2O96007 188 aaPredicted RBP16.52■□□□□ 0.24
CBX4-204ENST00000495122 JCHAINP01591 159 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 LRG1P02750 347 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 RHOP08100 348 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 MGAT1P26572 445 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 PGFP49763 221 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 RENBPP51606 427 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 NIPAL4Q0D2K0 466 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 ILF2Q12905 390 aaKnown RBP16.52■□□□□ 0.24
CBX4-204ENST00000495122 SLC5A9Q2M3M2 681 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 STXBP5Q5T5C0 1151 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 SDHAF4Q5VUM1 108 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 CASC4Q6P4E1 433 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 FOXR1Q6PIV2 292 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 C6orf89Q6UWU4 347 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 TMEM135Q86UB9 458 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 TAX1BP1Q86VP1 789 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 CHSY1Q86X52 802 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 TRIM42Q8IWZ5 723 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 CCDC33Q8N5R6 958 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 TTC9BQ8N6N2 239 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 MGARPQ8TDB4 240 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 DEPDC1BQ8WUY9 529 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 NSMCE1Q8WV22 266 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 PLD4Q96BZ4 506 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 CABS1Q96KC9 395 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 GORASP1Q9BQQ3 440 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 SLC39A8Q9C0K1 460 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 TBC1D17Q9HA65 648 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 MRM3Q9HC36 420 aaKnown RBP16.52■□□□□ 0.24
CBX4-204ENST00000495122 GLOD4Q9HC38 313 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 ARHGEF3Q9NR81 526 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 VPS45Q9NRW7 570 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 UXTQ9UBK9 157 aaPredicted RBP16.52■□□□□ 0.24
CBX4-204ENST00000495122 INSL5Q9Y5Q6 135 aa16.52■□□□□ 0.24
CBX4-204ENST00000495122 DOCK4Q8N1I0 1966 aa16.51■□□□□ 0.23
CBX4-204ENST00000495122 ZFHX2Q9C0A1 2572 aaPredicted RBP16.51■□□□□ 0.23
CBX4-204ENST00000495122 SLC12A8A0AV02 714 aa16.51■□□□□ 0.23
CBX4-204ENST00000495122 PROB1E7EW31 1015 aa16.51■□□□□ 0.23
CBX4-204ENST00000495122 PRRG1O14668 218 aa16.51■□□□□ 0.23
CBX4-204ENST00000495122 TLR5O60602 858 aa16.51■□□□□ 0.23
CBX4-204ENST00000495122 NEBLO76041 1014 aa16.51■□□□□ 0.23
CBX4-204ENST00000495122 ATF6P18850 670 aa16.51■□□□□ 0.23
CBX4-204ENST00000495122 ELF1P32519 619 aa16.51■□□□□ 0.23
CBX4-204ENST00000495122 ATP5C1P36542 298 aaKnown RBP16.51■□□□□ 0.23
CBX4-204ENST00000495122 NEK3P51956 506 aa16.51■□□□□ 0.23
CBX4-204ENST00000495122 WDR4P57081 412 aaKnown RBP16.51■□□□□ 0.23
CBX4-204ENST00000495122 SESN2P58004 480 aaPredicted RBP16.51■□□□□ 0.23
CBX4-204ENST00000495122 MPP3Q13368 585 aa16.51■□□□□ 0.23
CBX4-204ENST00000495122 PLD1Q13393 1074 aa16.51■□□□□ 0.23
CBX4-204ENST00000495122 VEPH1Q14D04 833 aa16.51■□□□□ 0.23
CBX4-204ENST00000495122 PRSS36Q5K4E3 855 aa16.51■□□□□ 0.23
CBX4-204ENST00000495122 SYCP2LQ5T4T6 812 aa16.51■□□□□ 0.23
CBX4-204ENST00000495122 TMCO4Q5TGY1 634 aa16.51■□□□□ 0.23
CBX4-204ENST00000495122 SH2D5Q6ZV89 423 aa16.51■□□□□ 0.23
CBX4-204ENST00000495122 SRLQ86TD4 932 aa16.51■□□□□ 0.23
CBX4-204ENST00000495122 PRPF39Q86UA1 669 aaKnown RBP16.51■□□□□ 0.23
CBX4-204ENST00000495122 TP53INP2Q8IXH6 220 aa16.51■□□□□ 0.23
CBX4-204ENST00000495122 C4orf33Q8N1A6 199 aa16.51■□□□□ 0.23
CBX4-204ENST00000495122 LRRN4Q8WUT4 740 aa16.51■□□□□ 0.23
CBX4-204ENST00000495122 ING5Q8WYH8 240 aa16.51■□□□□ 0.23
CBX4-204ENST00000495122 CELF6Q96J87 481 aaKnown RBP16.51■□□□□ 0.23
CBX4-204ENST00000495122 ZNF599Q96NL3 588 aa16.51■□□□□ 0.23
CBX4-204ENST00000495122 AGAP3Q96P47 875 aa16.51■□□□□ 0.23
CBX4-204ENST00000495122 MLPHQ9BV36 600 aaPredicted RBP16.51■□□□□ 0.23
CBX4-204ENST00000495122 CRISPLD1Q9H336 500 aa16.51■□□□□ 0.23
CBX4-204ENST00000495122 CYP4F11Q9HBI6 524 aa16.51■□□□□ 0.23
CBX4-204ENST00000495122 SYBUQ9NX95 663 aa16.51■□□□□ 0.23
CBX4-204ENST00000495122 IPO11Q9UI26 975 aaKnown RBP16.51■□□□□ 0.23
CBX4-204ENST00000495122 PRDM4Q9UKN5 801 aa16.51■□□□□ 0.23
CBX4-204ENST00000495122 SLC27A5Q9Y2P5 690 aa16.51■□□□□ 0.23
CBX4-204ENST00000495122 MRPS23Q9Y3D9 190 aaKnown RBP16.51■□□□□ 0.23
CBX4-204ENST00000495122 FAM169AQ9Y6X4 670 aa16.51■□□□□ 0.23
CBX4-204ENST00000495122 KIAA1549LQ6ZVL6 1849 aa16.5■□□□□ 0.23
CBX4-204ENST00000495122 A0A1W2PPM1 405 aa16.5■□□□□ 0.23
CBX4-204ENST00000495122 TCP11X1B4DZS4 312 aa16.5■□□□□ 0.23
CBX4-204ENST00000495122 TRIM49D1C9J1S8 452 aa16.5■□□□□ 0.23
CBX4-204ENST00000495122 LATS1O95835 1130 aa16.5■□□□□ 0.23
CBX4-204ENST00000495122 OAS1P00973 400 aaKnown RBP16.5■□□□□ 0.23
CBX4-204ENST00000495122 IL1BP01584 269 aa16.5■□□□□ 0.23
CBX4-204ENST00000495122 CEBPBP17676 345 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms