RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 CDH17Q12864 832 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 SMAD4Q13485 552 aaKnown RBP11.18□□□□□ -0.62
PKP4-215ENST00000494945 FASTKD3Q14CZ7 662 aaKnown RBP11.18□□□□□ -0.62
PKP4-215ENST00000494945 KYNUQ16719 465 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 FUT11Q495W5 492 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 ARMC3Q5W041 872 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 LINGO4Q6UY18 593 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 MTERF4Q7Z6M4 381 aaKnown RBP11.18□□□□□ -0.62
PKP4-215ENST00000494945 CCNJLQ8IV13 435 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 ANKMY2Q8IV38 441 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 ETFBKMTQ8IXQ9 262 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 ATP11CQ8NB49 1132 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 FBXO36Q8NEA4 188 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 IPMKQ8NFU5 416 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 FGF14Q92915 247 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 TTC17Q96AE7 1141 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 ZFYVE19Q96K21 471 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 MRGPRX2Q96LB1 330 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 SIGLEC10Q96LC7 697 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 ZIM3Q96PE6 472 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 RUFY1Q96T51 708 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 KXD1Q9BQD3 176 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 FSD1LQ9BXM9 530 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 PLA2G2FQ9BZM2 168 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 HPS4Q9NQG7 708 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 UBP1Q9NZI7 540 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 BFARQ9NZS9 450 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 LHX3Q9UBR4 397 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 PLAAQ9Y263 795 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 HS3ST2Q9Y278 367 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 ACTL7AQ9Y615 435 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 C5orf42Q9H799 3197 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 A0A087WUV0 522 aaPredicted RBP11.17□□□□□ -0.62
PKP4-215ENST00000494945 ANHXE9PGG2 379 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 MUSKO15146 869 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 INSIG1O15503 277 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 AVILO75366 819 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 TULP3O75386 442 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 PMPCBO75439 489 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 BANF1O75531 89 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 ACSL3O95573 720 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 CPP00450 1065 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 EPOP01588 193 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 CISD3P0C7P0 127 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 POLR2EP19388 210 aaKnown RBP11.17□□□□□ -0.62
PKP4-215ENST00000494945 PHBP35232 272 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 GRIA1P42261 906 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 MAPK8P45983 427 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 CSNK1DP48730 415 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 NUMBP49757 651 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 VASPP50552 380 aaPredicted RBP11.17□□□□□ -0.62
PKP4-215ENST00000494945 RHOAP61586 193 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 ECT2LQ008S8 904 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 GPS2Q13227 327 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 HTR4Q13639 388 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 RUNX3Q13761 415 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 SPARCL1Q14515 664 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 SLC29A2Q14542 456 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 GAB4Q2WGN9 574 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 MBLAC2Q68D91 279 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 PARM1Q6UWI2 310 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 RANBP10Q6VN20 620 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 CROCCP2Q86T23 111 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 ADIPOR2Q86V24 386 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 PALM2Q8IXS6 379 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 SH2D3CQ8N5H7 860 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.17□□□□□ -0.62
PKP4-215ENST00000494945 NAT16Q8N8M0 369 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 DNAAF3Q8N9W5 541 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 OR52K1Q8NGK4 314 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 ISG20Q96AZ6 181 aaKnown RBP11.17□□□□□ -0.62
PKP4-215ENST00000494945 FEM1CQ96JP0 617 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 EBNA1BP2Q99848 306 aaKnown RBP11.17□□□□□ -0.62
PKP4-215ENST00000494945 FICDQ9BVA6 458 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 TRMT61BQ9BVS5 477 aaKnown RBP11.17□□□□□ -0.62
PKP4-215ENST00000494945 CEP44Q9C0F1 390 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 UBE2ZQ9H832 354 aaPredicted RBP11.17□□□□□ -0.62
PKP4-215ENST00000494945 ARNT2Q9HBZ2 717 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 LRRC4CQ9HCJ2 640 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 SCUBE2Q9NQ36 999 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 CHMP2BQ9UQN3 213 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 ARIH1Q9Y4X5 557 aaPredicted RBP11.17□□□□□ -0.62
PKP4-215ENST00000494945 NFS1Q9Y697 457 aa11.17□□□□□ -0.62
PKP4-215ENST00000494945 PLXNB3Q9ULL4 1909 aa11.16□□□□□ -0.62
PKP4-215ENST00000494945 LOC285095A0A1B0GVY8 99 aa11.16□□□□□ -0.62
PKP4-215ENST00000494945 GRXCR2A6NFK2 248 aa11.16□□□□□ -0.62
PKP4-215ENST00000494945 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.16□□□□□ -0.62
PKP4-215ENST00000494945 H3BQ06 376 aaPredicted RBP11.16□□□□□ -0.62
PKP4-215ENST00000494945 MBTPS2O43462 519 aa11.16□□□□□ -0.62
PKP4-215ENST00000494945 USP12O75317 370 aa11.16□□□□□ -0.62
PKP4-215ENST00000494945 IGSF6O95976 241 aa11.16□□□□□ -0.62
PKP4-215ENST00000494945 MT-CO1P00395 513 aa11.16□□□□□ -0.62
PKP4-215ENST00000494945 AGTP01019 485 aa11.16□□□□□ -0.62
PKP4-215ENST00000494945 ASLP04424 464 aa11.16□□□□□ -0.62
PKP4-215ENST00000494945 SRPRAP08240 638 aaKnown RBP11.16□□□□□ -0.62
PKP4-215ENST00000494945 SRCP12931 536 aa11.16□□□□□ -0.62
PKP4-215ENST00000494945 CA4P22748 312 aa11.16□□□□□ -0.62
PKP4-215ENST00000494945 MGAT1P26572 445 aa11.16□□□□□ -0.62
PKP4-215ENST00000494945 GDI1P31150 447 aa11.16□□□□□ -0.62
PKP4-215ENST00000494945 RGRP47804 291 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms