RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 CYP2R1Q6VVX0 501 aa15.55■□□□□ 0.08
SDF4-207ENST00000494748 MFSD2AQ8NA29 543 aa15.55■□□□□ 0.08
SDF4-207ENST00000494748 RPF2Q9H7B2 306 aaKnown RBP15.55■□□□□ 0.08
SDF4-207ENST00000494748 SFMBT1Q9UHJ3 866 aa15.55■□□□□ 0.08
SDF4-207ENST00000494748 CLEC11AQ9Y240 323 aa15.55■□□□□ 0.08
SDF4-207ENST00000494748 ZNF236Q9UL36 1845 aa15.55■□□□□ 0.08
SDF4-207ENST00000494748 TIPRLO75663 272 aa15.55■□□□□ 0.08
SDF4-207ENST00000494748 ARL4AP40617 200 aa15.55■□□□□ 0.08
SDF4-207ENST00000494748 NAA20P61599 178 aa15.55■□□□□ 0.08
SDF4-207ENST00000494748 RBP5P82980 135 aa15.55■□□□□ 0.08
SDF4-207ENST00000494748 DGKDQ16760 1214 aa15.55■□□□□ 0.08
SDF4-207ENST00000494748 TMEM132AQ24JP5 1023 aa15.55■□□□□ 0.08
SDF4-207ENST00000494748 NBPF12Q5TAG4 269 aaPredicted RBP15.55■□□□□ 0.08
SDF4-207ENST00000494748 CEP97Q8IW35 865 aa15.55■□□□□ 0.08
SDF4-207ENST00000494748 TXNDC5Q8NBS9 432 aaKnown RBP15.55■□□□□ 0.08
SDF4-207ENST00000494748 TBC1D15Q8TC07 691 aa15.55■□□□□ 0.08
SDF4-207ENST00000494748 HIPK3Q9H422 1215 aa15.55■□□□□ 0.08
SDF4-207ENST00000494748 XPR1Q9UBH6 696 aa15.55■□□□□ 0.08
SDF4-207ENST00000494748 RUVBL2Q9Y230 463 aaKnown RBP15.55■□□□□ 0.08
SDF4-207ENST00000494748 PSMD12O00232 456 aaPredicted RBP15.54■□□□□ 0.08
SDF4-207ENST00000494748 COL6A2P12110 1019 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 MYF6P23409 242 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 AVPR1AP37288 418 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 SLC5A3P53794 718 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 CXCL9Q07325 125 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 GALNT2Q10471 571 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 ARHGAP17Q68EM7 881 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 KRT80Q6KB66 452 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 PID1Q7Z2X4 250 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 SPNS2Q8IVW8 549 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 GIPC3Q8TF64 312 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 NDRG1Q92597 394 aaKnown RBP15.54■□□□□ 0.08
SDF4-207ENST00000494748 ARMC1Q9NVT9 282 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 HEATR9A2RTY3 570 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 H3BMQ9 156 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 ATP6V1B2P21281 511 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 C1QTNF8P60827 252 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 PPP1R3AQ16821 1122 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 EFCAB12Q6NXP0 572 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 GPR141Q7Z602 305 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 ANKRD23Q86SG2 305 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 TTC39CQ8N584 583 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 CCNYQ8ND76 341 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 RSPH1Q8WYR4 309 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 SLC35B4Q969S0 331 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 COG8Q96MW5 612 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 TUBGCP4Q9UGJ1 667 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 ZNF112Q9UJU3 913 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 LCP1P13796 627 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 TNK2Q07912 1038 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 CYHR1Q6ZMK1 362 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 SLC41A1Q8IVJ1 513 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 ANKRD52Q8NB46 1076 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 DCUN1D5Q9BTE7 237 aa15.54■□□□□ 0.08
SDF4-207ENST00000494748 I6L893 689 aaPredicted RBP15.53■□□□□ 0.08
SDF4-207ENST00000494748 ZBTB24O43167 697 aaPredicted RBP15.53■□□□□ 0.08
SDF4-207ENST00000494748 NPHS1O60500 1241 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 SERPINB7O75635 380 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 ARF4P18085 180 aaPredicted RBP15.53■□□□□ 0.08
SDF4-207ENST00000494748 GRM5P41594 1212 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 C1QTNF12Q5T7M4 302 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 PLPPR4Q7Z2D5 763 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 ERMP1Q7Z2K6 904 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 SNX31Q8N9S9 440 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 RHOJQ9H4E5 214 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 TRPC7Q9HCX4 862 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 ANLNQ9NQW6 1124 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.53■□□□□ 0.081e-6■■■□□ 15.7
SDF4-207ENST00000494748 MAGED2Q9UNF1 606 aaPredicted RBP15.53■□□□□ 0.08
SDF4-207ENST00000494748 ZFC3H1O60293 1989 aaKnown RBP15.53■□□□□ 0.08
SDF4-207ENST00000494748 TTC36A6NLP5 189 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 FAM72CH0Y354 149 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 AHSGP02765 367 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 ALDH2P05091 517 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 DCKP27707 260 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 KCNC4Q03721 635 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 PMS2P3Q13401 168 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 Q3C1V9 767 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 FAM72AQ5TYM5 149 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 FAM72DQ6L9T8 149 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 ZBTB49Q6ZSB9 765 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 FAM72BQ86X60 149 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 SPATA6LQ8N4H0 392 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 CANT1Q8WVQ1 401 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 DPF3Q92784 378 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 NT5C3BQ969T7 300 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 NXNL1Q96CM4 212 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 OMDQ99983 421 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 SPAG4Q9NPE6 437 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 PRMT7Q9NVM4 692 aaPredicted RBP15.53■□□□□ 0.08
SDF4-207ENST00000494748 BFARQ9NZS9 450 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 PTBP2Q9UKA9 531 aaKnown RBP15.53■□□□□ 0.08
SDF4-207ENST00000494748 GJD2Q9UKL4 321 aa15.53■□□□□ 0.08
SDF4-207ENST00000494748 ZNF839A8K0R7 811 aa15.52■□□□□ 0.08
SDF4-207ENST00000494748 SOCS7O14512 581 aa15.52■□□□□ 0.08
SDF4-207ENST00000494748 FUT4P22083 530 aa15.52■□□□□ 0.08
SDF4-207ENST00000494748 HADHAP40939 763 aa15.52■□□□□ 0.08
SDF4-207ENST00000494748 MATKP42679 507 aa15.52■□□□□ 0.08
SDF4-207ENST00000494748 GSTM4Q03013 218 aa15.52■□□□□ 0.08
SDF4-207ENST00000494748 ZBTB17Q13105 803 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms