RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 RBM15Q96T37 977 aaKnown RBP eCLIP11.57□□□□□ -0.56
MCF2L-231ENST00000494043 FMO2Q99518 471 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 SEMA3CQ99985 751 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 CEP44Q9C0F1 390 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 C8orf33Q9H7E9 229 aaPredicted RBP11.57□□□□□ -0.56
MCF2L-231ENST00000494043 ELOVL2Q9NXB9 296 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 GOLGA6AQ9NYA3 693 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 MTRF1LQ9UGC7 380 aaKnown RBP11.57□□□□□ -0.56
MCF2L-231ENST00000494043 TTC24A2A3L6 582 aaPredicted RBP11.56□□□□□ -0.56
MCF2L-231ENST00000494043 CCDC151A5D8V7 595 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 TBC1D3BA6NDS4 549 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 INSIG1O15503 277 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 PSMD3O43242 534 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 NARSO43776 548 aaKnown RBP11.56□□□□□ -0.56
MCF2L-231ENST00000494043 ATP9BO43861 1147 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 ZNF821O75541 412 aaPredicted RBP11.56□□□□□ -0.56
MCF2L-231ENST00000494043 GJB3O75712 270 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 SUN1O94901 812 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 AP2A1O95782 977 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 MT-CYBP00156 380 aaPredicted RBP11.56□□□□□ -0.56
MCF2L-231ENST00000494043 SRFP11831 508 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 CES1P23141 567 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 CD86P42081 329 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 SKOR1P84550 965 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 NSUN2Q08J23 767 aaKnown RBP eCLIP11.56□□□□□ -0.56
MCF2L-231ENST00000494043 MPP3Q13368 585 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 SLC14A2Q15849 920 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 PTPRNQ16849 979 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 RALGPS1Q5JS13 557 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 SYCP2LQ5T4T6 812 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 KDELC1Q6UW63 502 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 PPP1R21Q6ZMI0 780 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 RALGPS2Q86X27 583 aaPredicted RBP11.56□□□□□ -0.56
MCF2L-231ENST00000494043 SFTPA1Q8IWL2 248 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 ZCCHC9Q8N567 271 aaKnown RBP11.56□□□□□ -0.56
MCF2L-231ENST00000494043 PCDH20Q8N6Y1 951 aaKnown RBP11.56□□□□□ -0.56
MCF2L-231ENST00000494043 PDCD7Q8N8D1 485 aaKnown RBP11.56□□□□□ -0.56
MCF2L-231ENST00000494043 MCUQ8NE86 351 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 AENQ8WTP8 325 aaKnown RBP11.56□□□□□ -0.56
MCF2L-231ENST00000494043 MYO19Q96H55 970 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 NUDCD1Q96RS6 583 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 P2RY13Q9BPV8 354 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 FOXP3Q9BZS1 431 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 LRRC40Q9H9A6 602 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 SLC2A4RGQ9NR83 387 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 VPS45Q9NRW7 570 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 UBP1Q9NZI7 540 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 FAM153AQ9UHL3 310 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 SLCO3A1Q9UIG8 710 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 AAR2Q9Y312 384 aaKnown RBP11.56□□□□□ -0.56
MCF2L-231ENST00000494043 PIAS3Q9Y6X2 628 aa11.56□□□□□ -0.56
MCF2L-231ENST00000494043 MUC22E2RYF6 1773 aaPredicted RBP11.55□□□□□ -0.56
MCF2L-231ENST00000494043 GOLGA8MH3BSY2 632 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 PMPCBO75439 489 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 ERLIN1O75477 346 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 IGSF6O95976 241 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 GSRP00390 522 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 SERPINF2P08697 491 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 GLULP15104 373 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 H2AFXP16104 143 aaPredicted RBP11.55□□□□□ -0.56
MCF2L-231ENST00000494043 NNMTP40261 264 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 CSNK1DP48730 415 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 SCNN1BP51168 640 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 GALK1P51570 392 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 WNT3AP56704 352 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 ST8SIA6P61647 398 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 AP1S1P61966 158 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 IHHQ14623 411 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 DLG2Q15700 870 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 MAP9Q49MG5 647 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 DGKKQ5KSL6 1271 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 ATXN7L2Q5T6C5 722 aaPredicted RBP11.55□□□□□ -0.56
MCF2L-231ENST00000494043 TXNDC11Q6PKC3 985 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 NUDT18Q6ZVK8 323 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 ZNF534Q76KX8 674 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 SRLQ86TD4 932 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 RNF135Q8IUD6 432 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 KDM1BQ8NB78 822 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 UCMAQ8WVF2 138 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 MSANTD3Q96H12 275 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 GDAP1L1Q96MZ0 367 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 FRMD8Q9BZ67 464 aaPredicted RBP11.55□□□□□ -0.56
MCF2L-231ENST00000494043 TM6SF2Q9BZW4 377 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 PHACTR1Q9C0D0 580 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 TNKS2Q9H2K2 1166 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 NOD2Q9HC29 1040 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 FBRSL1Q9HCM7 1045 aaKnown RBP11.55□□□□□ -0.56
MCF2L-231ENST00000494043 SCUBE2Q9NQ36 999 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 HEBP1Q9NRV9 189 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 DUSP12Q9UNI6 340 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 COL6A3P12111 3177 aa11.55□□□□□ -0.56
MCF2L-231ENST00000494043 MIA3Q5JRA6 1907 aa11.54□□□□□ -0.56
MCF2L-231ENST00000494043 TTC34A8MYJ7 566 aa11.54□□□□□ -0.56
MCF2L-231ENST00000494043 PPFIA2O75334 1257 aa11.54□□□□□ -0.56
MCF2L-231ENST00000494043 FAM153BP0C7A2 387 aa11.54□□□□□ -0.56
MCF2L-231ENST00000494043 MLNP12872 115 aa11.54□□□□□ -0.56
MCF2L-231ENST00000494043 ADRA1AP35348 466 aa11.54□□□□□ -0.56
MCF2L-231ENST00000494043 GRIA1P42261 906 aa11.54□□□□□ -0.56
MCF2L-231ENST00000494043 TNFRSF4P43489 277 aa11.54□□□□□ -0.56
MCF2L-231ENST00000494043 MAPK8P45983 427 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms