RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 FEM1AQ9BSK4 669 aa11.26□□□□□ -0.61
TMEM39A-211ENST00000491685 RAB6CQ9H0N0 254 aa11.26□□□□□ -0.61
TMEM39A-211ENST00000491685 RETREG1Q9H6L5 497 aa11.26□□□□□ -0.61
TMEM39A-211ENST00000491685 ARHGEF38Q9NXL2 777 aa11.26□□□□□ -0.61
TMEM39A-211ENST00000491685 APC2O95996 2303 aa11.26□□□□□ -0.61
TMEM39A-211ENST00000491685 ACACAQ13085 2346 aa11.26□□□□□ -0.61
TMEM39A-211ENST00000491685 BPTFQ12830 3046 aa11.26□□□□□ -0.61
TMEM39A-211ENST00000491685 ARID1BQ8NFD5 2236 aaPredicted RBP11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 TBC1D3DA0A087WVF3 549 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 TBC1D3IA0A087WXS9 549 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 TBC1D3EA0A087X179 549 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 TBC1D3KA0A087X1G2 549 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 A0A0A6YYK5 440 aaPredicted RBP11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 TBC1D3FA6NER0 549 aaPredicted RBP11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 TBC1D3LB9A6J9 549 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 CCP110O43303 1012 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 ATMINO43313 823 aaPredicted RBP11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 LATO43561 262 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 PLRG1O43660 514 aaKnown RBP11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 KRT86O43790 486 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 BNIP3LO60238 219 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 GJB6O95452 261 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 TBC1D3HP0C7X1 549 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 SRCP12931 536 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 GLDCP23378 1020 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 EPHA8P29322 1005 aaPredicted RBP11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 PCK1P35558 622 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 ZNF135P52742 658 aaPredicted RBP11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 NXPH1P58417 271 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 CCDC15Q0P6D6 951 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 DNAJC3Q13217 504 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 CAMK2BQ13554 666 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 MESDQ14696 234 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 TCEAL1Q15170 157 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 DLG2Q15700 870 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 C15orf59Q2T9L4 293 aaPredicted RBP11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 ACCSLQ4AC99 568 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 SLC45A4Q5BKX6 768 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 ZFYVE27Q5T4F4 411 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 ERMARDQ5T6L9 678 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 TBC1D3GQ6DHY5 549 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 TBC1D3CQ6IPX1 549 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 NAPEPLDQ6IQ20 393 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 RAD9BQ6WBX8 426 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 KANSL1Q7Z3B3 1105 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 DNAAF5Q86Y56 855 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 PSTKQ8IV42 348 aaKnown RBP11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 TBC1D3Q8IZP1 549 aaPredicted RBP11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 SH2D3CQ8N5H7 860 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 PIP4K2CQ8TBX8 421 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 SAP25Q8TEE9 199 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 RFFLQ8WZ73 363 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 OR8D1Q8WZ84 308 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 ARRDC3Q96B67 414 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 TSGA10Q9BZW7 698 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 OSBPL2Q9H1P3 480 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 CCDC86Q9H6F5 360 aaKnown RBP11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 MPP6Q9NZW5 540 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 FTSJ1Q9UET6 329 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 VPS51Q9UID3 782 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 SLC25A13Q9UJS0 675 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 VPS28Q9UK41 221 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 PPM1HQ9ULR3 514 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 NENFQ9UMX5 172 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 TBC1D30Q9Y2I9 924 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 RAXQ9Y2V3 346 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 GOLGA4Q13439 2230 aaKnown RBP11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 SHROOM3Q8TF72 1996 aa11.25□□□□□ -0.61
TMEM39A-211ENST00000491685 COL27A1Q8IZC6 1860 aaPredicted RBP11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 A0A0D9SEW6 157 aa11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 TLR4O00206 839 aa11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 YKT6O15498 198 aa11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 DAPK3O43293 454 aa11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 SMAD6O43541 496 aaKnown RBP11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 CLDN11O75508 207 aa11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 RHOCP08134 193 aa11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 CCDC175P0C221 793 aa11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 NUDT1P36639 197 aa11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 VASPP50552 380 aaPredicted RBP11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 VAV2P52735 878 aa11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 CDH4P55283 916 aa11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 BNIP3Q12983 259 aa11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 ZNF177Q13360 481 aaPredicted RBP11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 PIP5KL1Q5T9C9 394 aa11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 LINGO4Q6UY18 593 aa11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 TFAP2DQ7Z6R9 452 aa11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 FAM131BQ86XD5 332 aa11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 MAP7D3Q8IWC1 876 aa11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 EID2Q8N6I1 236 aa11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 NIPA2Q8N8Q9 360 aa11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 CHST14Q8NCH0 376 aa11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 NTAN1Q96AB6 310 aa11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 CCDC114Q96M63 670 aa11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 BBC3Q96PG8 261 aaPredicted RBP11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 MYOCQ99972 504 aa11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 PACSIN1Q9BY11 444 aa11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 MUC3BQ9H195 1237 aa11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 SCUBE2Q9NQ36 999 aa11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 GDF3Q9NR23 364 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms