RNA–Protein interactions for RNA: ENST00000490444.2

PUM3-204, Transcript of pumilio RNA binding family member 3, human

TSL 5

Gene PUM3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM3-204	ENST00000490444	TMCO5A	Q8N6Q1	288 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	TSPYL6	Q8N831	410 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	SPC24	Q8NBT2	197 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	MNS1	Q8NEH6	495 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	PRSS3P2	Q8NHM4	247 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	BRSK1	Q8TDC3	778 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	WDR60	Q8WVS4	1066 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	AKAP1	Q92667	903 aa	Known RBP eCLIP	2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	MAP4K1	Q92918	833 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	ZUFSP	Q96AP4	578 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	ZNF845	Q96IR2	970 aa	Predicted RBP	2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	C5orf34	Q96MH7	638 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	CCDC43	Q96MW1	224 aa	Known RBP	2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	NPAS1	Q99742	590 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	SLX1A	Q9BQ83	275 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	PI4K2A	Q9BTU6	479 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	EFHD1	Q9BUP0	239 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	TM2D2	Q9BX73	214 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	TWSG1	Q9GZX9	223 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	C2orf40	Q9H1Z8	148 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	ACAD9	Q9H845	621 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	FANCF	Q9NPI8	374 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	PDGFC	Q9NRA1	345 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	FBXO28	Q9NVF7	368 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	PCSK1N	Q9UHG2	260 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	NFU1	Q9UMS0	254 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	PCDHGB4	Q9UN71	923 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	B3GNT3	Q9Y2A9	372 aa		2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	SIRT4	Q9Y6E7	314 aa	Predicted RBP	2.7	□□□□□ -1.98
PUM3-204	ENST00000490444	SPATA31A5	Q5VU36	1347 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	SPATA31A7	Q8IWB4	1347 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	CYP3A7-CYP3A51P	A0A087WV96	503 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	CCDC196	A0A1B0GTZ2	297 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	hCG_1807616	A0A1W2PRN6	198 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	C2orf81	A6NN90	581 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	TMEM232	C9JQI7	657 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	BOLA2-SMG1P6	H3BVE0	249 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	SLC7A4	O43246	635 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	BCAR3	O75815	825 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	STAM2	O75886	525 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	HEXIM1	O94992	359 aa	Known RBP	2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	SLU7	O95391	586 aa	Known RBP	2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	LARGE1	O95461	756 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	SGPL1	O95470	568 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	RFPL3S	P0C7P2	107 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	SCG2	P13521	617 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	POR	P16435	677 aa	Predicted RBP	2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	CYP3A7	P24462	503 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	HOXD13	P35453	343 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	SOX2	P48431	317 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	PRKAA2	P54646	552 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	TAS2R50	P59544	299 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	RBM6	P78332	1123 aa	Known RBP	2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	IL1RL1	Q01638	556 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	TLE3	Q04726	772 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	LRMP	Q12912	555 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	PRPF4B	Q13523	1007 aa	Known RBP	2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	KPNB1	Q14974	876 aa	Known RBP	2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	DLGAP5	Q15398	846 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	OASL	Q15646	514 aa	Known RBP	2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	CNGA3	Q16281	694 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	TST	Q16762	297 aa	Known RBP	2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	P3H1	Q32P28	736 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	ADCK5	Q3MIX3	580 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	ANKDD1A	Q495B1	522 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	GALNTL6	Q49A17	601 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	C1orf141	Q5JVX7	400 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	KIAA1161	Q6NSJ0	714 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	ZNF474	Q6S9Z5	364 aa	Predicted RBP	2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	VSTM1	Q6UX27	236 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	KRT27	Q7Z3Y8	459 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	MOGAT3	Q86VF5	341 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	CPO	Q8IVL8	374 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	CEP97	Q8IW35	865 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	ADGRF3	Q8IZF5	1079 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	NANOGP1	Q8N7R0	232 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	ZNF540	Q8NDQ6	660 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	GABPB2	Q8TAK5	448 aa	Predicted RBP	2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	SLC2A12	Q8TD20	617 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	CLEC4C	Q8WTT0	213 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	GIMAP1	Q8WWP7	306 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	CELF1	Q92879	486 aa	Known RBP	2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	ARHGEF2	Q92974	986 aa	Known RBP	2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	NSUN4	Q96CB9	384 aa	Known RBP	2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	FAR2	Q96K12	515 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	HS6ST2	Q96MM7	605 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	EIF3C	Q99613	913 aa	Known RBP	2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	MXD3	Q9BW11	206 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	ACAT2	Q9BWD1	397 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	EDEM3	Q9BZQ6	932 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	DNAI2	Q9GZS0	605 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	PAIP1	Q9H074	479 aa	Known RBP	2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	NUAK2	Q9H093	628 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	OR10A4	Q9H209	315 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	EBF3	Q9H4W6	596 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	PAPOLB	Q9NRJ5	636 aa	Known RBP	2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	SLC22A11	Q9NSA0	550 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	RBM28	Q9NW13	759 aa	Known RBP	2.69	□□□□□ -1.98

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