RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 LRIG3Q6UXM1 1119 aa14.36□□□□□ -0.11
VPS26A-205ENST00000489656 LEKR1Q6ZMV7 388 aa14.36□□□□□ -0.11
VPS26A-205ENST00000489656 ADIPOR2Q86V24 386 aa14.36□□□□□ -0.11
VPS26A-205ENST00000489656 YAF2Q8IY57 180 aa14.36□□□□□ -0.11
VPS26A-205ENST00000489656 ZBED8Q8IZ13 594 aa14.36□□□□□ -0.11
VPS26A-205ENST00000489656 CPA6Q8N4T0 437 aa14.36□□□□□ -0.11
VPS26A-205ENST00000489656 SPATA22Q8NHS9 363 aa14.36□□□□□ -0.11
VPS26A-205ENST00000489656 UBLCP1Q8WVY7 318 aaPredicted RBP14.36□□□□□ -0.11
VPS26A-205ENST00000489656 FGF14Q92915 247 aa14.36□□□□□ -0.11
VPS26A-205ENST00000489656 TTC17Q96AE7 1141 aa14.36□□□□□ -0.11
VPS26A-205ENST00000489656 ISG20Q96AZ6 181 aaKnown RBP14.36□□□□□ -0.11
VPS26A-205ENST00000489656 ZFYVE19Q96K21 471 aa14.36□□□□□ -0.11
VPS26A-205ENST00000489656 MRGPRX2Q96LB1 330 aa14.36□□□□□ -0.11
VPS26A-205ENST00000489656 SIGLEC10Q96LC7 697 aa14.36□□□□□ -0.11
VPS26A-205ENST00000489656 FAM161BQ96MY7 647 aa14.36□□□□□ -0.11
VPS26A-205ENST00000489656 NUDCD1Q96RS6 583 aa14.36□□□□□ -0.11
VPS26A-205ENST00000489656 SEMA3CQ99985 751 aa14.36□□□□□ -0.11
VPS26A-205ENST00000489656 TBL1YQ9BQ87 522 aa14.36□□□□□ -0.11
VPS26A-205ENST00000489656 EBF3Q9H4W6 596 aa14.36□□□□□ -0.11
VPS26A-205ENST00000489656 UBE2ZQ9H832 354 aaPredicted RBP14.36□□□□□ -0.11
VPS26A-205ENST00000489656 DNAJC17Q9NVM6 304 aaKnown RBP14.36□□□□□ -0.11
VPS26A-205ENST00000489656 LHX3Q9UBR4 397 aa14.36□□□□□ -0.11
VPS26A-205ENST00000489656 ACTL7AQ9Y615 435 aa14.36□□□□□ -0.11
VPS26A-205ENST00000489656 SCN8AQ9UQD0 1980 aa14.36□□□□□ -0.11
VPS26A-205ENST00000489656 GRXCR2A6NFK2 248 aa14.35□□□□□ -0.11
VPS26A-205ENST00000489656 EPOP01588 193 aa14.35□□□□□ -0.11
VPS26A-205ENST00000489656 CD86P42081 329 aa14.35□□□□□ -0.11
VPS26A-205ENST00000489656 GRIA1P42261 906 aa14.35□□□□□ -0.11
VPS26A-205ENST00000489656 CSNK1DP48730 415 aa14.35□□□□□ -0.11
VPS26A-205ENST00000489656 NPY2RP49146 381 aa14.35□□□□□ -0.11
VPS26A-205ENST00000489656 DGKGP49619 791 aa14.35□□□□□ -0.11
VPS26A-205ENST00000489656 MAXP61244 160 aa14.35□□□□□ -0.11
VPS26A-205ENST00000489656 ITKQ08881 620 aa14.35□□□□□ -0.11
VPS26A-205ENST00000489656 HTR4Q13639 388 aa14.35□□□□□ -0.11
VPS26A-205ENST00000489656 RUNX3Q13761 415 aa14.35□□□□□ -0.11
VPS26A-205ENST00000489656 FASTKD3Q14CZ7 662 aaKnown RBP14.35□□□□□ -0.11
VPS26A-205ENST00000489656 KYNUQ16719 465 aa14.35□□□□□ -0.11
VPS26A-205ENST00000489656 BBS9Q3SYG4 887 aa14.35□□□□□ -0.11
VPS26A-205ENST00000489656 DENND2CQ68D51 928 aa14.35□□□□□ -0.11
VPS26A-205ENST00000489656 LINGO4Q6UY18 593 aa14.35□□□□□ -0.11
VPS26A-205ENST00000489656 RANBP10Q6VN20 620 aa14.35□□□□□ -0.11
VPS26A-205ENST00000489656 AGGF1Q8N302 714 aaeCLIP14.35□□□□□ -0.11
VPS26A-205ENST00000489656 PKNOX2Q96KN3 472 aa14.35□□□□□ -0.11
VPS26A-205ENST00000489656 CDX2Q99626 313 aaPredicted RBP14.35□□□□□ -0.11
VPS26A-205ENST00000489656 KXD1Q9BQD3 176 aa14.35□□□□□ -0.11
VPS26A-205ENST00000489656 WDR83Q9BRX9 315 aaKnown RBP14.35□□□□□ -0.11
VPS26A-205ENST00000489656 CEP44Q9C0F1 390 aa14.35□□□□□ -0.11
VPS26A-205ENST00000489656 ACBD3Q9H3P7 528 aa14.35□□□□□ -0.11
VPS26A-205ENST00000489656 ARNT2Q9HBZ2 717 aa14.35□□□□□ -0.11
VPS26A-205ENST00000489656 SLC25A13Q9UJS0 675 aa14.35□□□□□ -0.11
VPS26A-205ENST00000489656 ZNF106Q9H2Y7 1883 aaKnown RBP14.35□□□□□ -0.11
VPS26A-205ENST00000489656 CKAP5Q14008 2032 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 OTOL1A6NHN0 477 aaPredicted RBP14.34□□□□□ -0.11
VPS26A-205ENST00000489656 SDR42E2A6NKP2 422 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 ARNTLO00327 626 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 INSIG1O15503 277 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 MBTPS2O43462 519 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 AVILO75366 819 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 TULP3O75386 442 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 BANF1O75531 89 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 SPAG6O75602 509 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 MT-CO1P00395 513 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 ASLP04424 464 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 SERPINF2P08697 491 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 GSTA2P09210 222 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 EIF2DP41214 584 aaKnown RBP14.34□□□□□ -0.11
VPS26A-205ENST00000489656 ELK3P41970 407 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 RGRP47804 291 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 EIF3BP55884 814 aaKnown RBP14.34□□□□□ -0.11
VPS26A-205ENST00000489656 WNT3AP56704 352 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 AP1S1P61966 158 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 CDH17Q12864 832 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 SPARCL1Q14515 664 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 SLC29A2Q14542 456 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 IHHQ14623 411 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 MBLAC2Q68D91 279 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 CCNJLQ8IV13 435 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 SH2D3CQ8N5H7 860 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 ATP11CQ8NB49 1132 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 FBXO36Q8NEA4 188 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 IPMKQ8NFU5 416 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 OR52K1Q8NGK4 314 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 PYROXD1Q8WU10 500 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 MYLIPQ8WY64 445 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 FEM1CQ96JP0 617 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 C9orf72Q96LT7 481 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 ZIM3Q96PE6 472 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 NAT9Q9BTE0 207 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 TRMT61BQ9BVS5 477 aaKnown RBP14.34□□□□□ -0.11
VPS26A-205ENST00000489656 LRRC4CQ9HCJ2 640 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 UBP1Q9NZI7 540 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 PLAAQ9Y263 795 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 NFS1Q9Y697 457 aa14.34□□□□□ -0.11
VPS26A-205ENST00000489656 LOC285095A0A1B0GVY8 99 aa14.33□□□□□ -0.12
VPS26A-205ENST00000489656 H3BQ06 376 aaPredicted RBP14.33□□□□□ -0.12
VPS26A-205ENST00000489656 SMAD6O43541 496 aaKnown RBP14.33□□□□□ -0.12
VPS26A-205ENST00000489656 PMPCBO75439 489 aa14.33□□□□□ -0.12
VPS26A-205ENST00000489656 SRPRAP08240 638 aaKnown RBP14.33□□□□□ -0.12
VPS26A-205ENST00000489656 SRCP12931 536 aa14.33□□□□□ -0.12
VPS26A-205ENST00000489656 POLR2EP19388 210 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms