RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 IL21RQ9HBE5 538 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 NDFIP2Q9NV92 336 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 FTSJ1Q9UET6 329 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 IP6K2Q9UHH9 426 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 ANAPC7Q9UJX3 599 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 NUP205Q92621 2012 aa9.27□□□□□ -0.92
HDAC6-232ENST00000489053 MUC22E2RYF6 1773 aaPredicted RBP9.27□□□□□ -0.92
HDAC6-232ENST00000489053 TCRBV5S1A1TA0A578 114 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 H0Y8X5 98 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 KCNK3O14649 394 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 LATO43561 262 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 TSPAN6O43657 245 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 PALMO75781 387 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 ZMPSTE24O75844 475 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 NEBLO76041 1014 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 CTSLP07711 333 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 HNRNPA2B1P22626 353 aaKnown RBP9.27□□□□□ -0.93
HDAC6-232ENST00000489053 PMLP29590 882 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 PCK1P35558 622 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 GJC1P36383 396 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 NDST2P52849 883 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 OGDHQ02218 1023 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 SERINC3Q13530 473 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 GRM3Q14832 879 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 BOLA3Q53S33 107 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 INO80DQ53TQ3 878 aaPredicted RBP9.27□□□□□ -0.93
HDAC6-232ENST00000489053 ZNF805Q5CZA5 627 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 ATXN7L2Q5T6C5 722 aaPredicted RBP9.27□□□□□ -0.93
HDAC6-232ENST00000489053 PIP5KL1Q5T9C9 394 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 E4F1Q66K89 784 aaPredicted RBP9.27□□□□□ -0.93
HDAC6-232ENST00000489053 ERAP2Q6P179 960 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 ALKBH5Q6P6C2 394 aaKnown RBP9.27□□□□□ -0.93
HDAC6-232ENST00000489053 TTC7BQ86TV6 843 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 IQCHQ86VS3 1027 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 DNAAF5Q86Y56 855 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 PLPP6Q8IY26 295 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 UMODL1-AS1Q8N2C9 162 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 LZTR1Q8N653 840 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 MFSD2AQ8NA29 543 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 OR8K1Q8NGG5 319 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 C1orf216Q8TAB5 229 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 CXorf40AQ8TE69 158 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 RAB7BQ96AH8 199 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 ARRDC3Q96B67 414 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 KLHL32Q96NJ5 620 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 CNTNAP3BQ96NU0 1288 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 CAMK1GQ96NX5 476 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 KCTD15Q96SI1 283 aaPredicted RBP9.27□□□□□ -0.93
HDAC6-232ENST00000489053 SYT11Q9BT88 431 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 SNRNP25Q9BV90 132 aaKnown RBP9.27□□□□□ -0.93
HDAC6-232ENST00000489053 CINPQ9BW66 212 aaPredicted RBP9.27□□□□□ -0.93
HDAC6-232ENST00000489053 CALN1Q9BXU9 219 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 CNTNAP3Q9BZ76 1288 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 MAGEB5Q9BZ81 275 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 ISCUQ9H1K1 167 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.27□□□□□ -0.93
HDAC6-232ENST00000489053 HAUS2Q9NVX0 235 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 ZNF212Q9UDV6 495 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 LCMT1Q9UIC8 334 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 WASF2Q9Y6W5 498 aa9.27□□□□□ -0.93
HDAC6-232ENST00000489053 CACNA1EQ15878 2313 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 C16orf96A6NNT2 1141 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 A6NNZ2 444 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 WASH4PA8MWX3 477 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 FPGTO14772 594 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 PCDHGA12O60330 932 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 LRCH4O75427 683 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 GJB3O75712 270 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 GYPCP04921 128 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 FTH1P19P0C7X4 201 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 THEGLP0DJG4 465 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 ALPPL2P10696 532 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 NFKBIAP25963 317 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 SERPINA4P29622 427 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 SERPINB6P35237 376 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 EIF4A3P38919 411 aaKnown RBP9.26□□□□□ -0.93
HDAC6-232ENST00000489053 NXPH1P58417 271 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 BNC1Q01954 994 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 ZNF235Q14590 738 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 SMTNL2Q2TAL5 461 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 PRAMEF14Q5SWL7 426 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 TMCO3Q6UWJ1 677 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 PARS2Q7L3T8 475 aaKnown RBP9.26□□□□□ -0.93
HDAC6-232ENST00000489053 ATPAF2Q8N5M1 289 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 FAM174AQ8TBP5 190 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 EXOC2Q96KP1 924 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 CCDC42Q96M95 316 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 SLC17A9Q9BYT1 436 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 THAP2Q9H0W7 228 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 ATP13A3Q9H7F0 1226 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 EVA1BQ9NVM1 165 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 PCOLCE2Q9UKZ9 415 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 ACTL7AQ9Y615 435 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 SLCO1B1Q9Y6L6 691 aa9.26□□□□□ -0.93
HDAC6-232ENST00000489053 A0A087X0T9 212 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 A0A1B0GTQ1 180 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 TMEM110-MUSTN1A8MSY1 372 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 H3BM21 787 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 TNFSF14O43557 240 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 AP1G1O43747 822 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms