RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.15□□□□□ -1.42
CDHR3-213ENST00000488386 TNRC6BQ9UPQ9 1833 aaKnown RBP6.15□□□□□ -1.43
CDHR3-213ENST00000488386 SYNJ2BP-COX16A0A087WUM0 186 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 A0A1W2PQF6 199 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 BECN2A8MW95 431 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.14□□□□□ -1.43
CDHR3-213ENST00000488386 PRODHO43272 600 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 THAP12O43422 761 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 CACNG3O60359 315 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 LETM1O95202 739 aaPredicted RBP6.14□□□□□ -1.43
CDHR3-213ENST00000488386 MOCS2O96007 188 aaPredicted RBP6.14□□□□□ -1.43
CDHR3-213ENST00000488386 FYNP06241 537 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 FAM153BP0C7A2 387 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 HLA-EP13747 358 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 HOXA6P31267 233 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 SLC6A4P31645 630 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 EIF2DP41214 584 aaKnown RBP6.14□□□□□ -1.43
CDHR3-213ENST00000488386 IL12RB1P42701 662 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 PTGER3P43115 390 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 TNFRSF4P43489 277 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 MTIF2P46199 727 aaKnown RBP6.14□□□□□ -1.43
CDHR3-213ENST00000488386 ZNF132P52740 706 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 MFAP3P55082 362 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 SLC8A3P57103 927 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 ERVFRD-1P60508 538 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 YWHAEP62258 255 aaKnown RBP6.14□□□□□ -1.43
CDHR3-213ENST00000488386 PITX1P78337 314 aaPredicted RBP6.14□□□□□ -1.43
CDHR3-213ENST00000488386 PUM1Q14671 1186 aaKnown RBP eCLIP6.14□□□□□ -1.43
CDHR3-213ENST00000488386 TAF5Q15542 800 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 EOGTQ5NDL2 527 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 ZNF648Q5T619 568 aaPredicted RBP6.14□□□□□ -1.43
CDHR3-213ENST00000488386 PMS2CLQ68D20 193 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 TMEM215Q68D42 235 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 PM20D1Q6GTS8 502 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 KLHDC10Q6PID8 442 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 LCLAT1Q6UWP7 414 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 PPIL6Q8IXY8 311 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 CHPFQ8IZ52 775 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 DDI1Q8WTU0 396 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 RNF139Q8WU17 664 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 SLC35F5Q8WV83 523 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 PIGKQ92643 395 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 EXOC4Q96A65 974 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 OTUB2Q96DC9 234 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 XPO6Q96QU8 1125 aaKnown RBP6.14□□□□□ -1.43
CDHR3-213ENST00000488386 DNAJC7Q99615 494 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 CLSTN2Q9H4D0 955 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 MTG2Q9H4K7 406 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 PIF1Q9H611 641 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 PLCB1Q9NQ66 1216 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 TMEM74BQ9NUR3 256 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 CLIC5Q9NZA1 410 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 COX16Q9P0S2 106 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 CALCOCO1Q9P1Z2 691 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 XPO7Q9UIA9 1087 aaKnown RBP6.14□□□□□ -1.43
CDHR3-213ENST00000488386 RWDD2AQ9UIY3 292 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 NAALADL1Q9UQQ1 740 aa6.14□□□□□ -1.43
CDHR3-213ENST00000488386 SPTBN4Q9H254 2564 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 CCDC163A0A0D9SF12 145 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 MYOCOSA0A1B0GUC4 107 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 BLACEA4D250 179 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 E5RJQ4 531 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 GRAP2O75791 330 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 CAVIN2O95810 425 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 PENKP01210 267 aaPredicted RBP6.13□□□□□ -1.43
CDHR3-213ENST00000488386 LTFP02788 710 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 PAEPP09466 180 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 SETSIPP0DME0 302 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 PABPC1P11940 636 aaKnown RBP6.13□□□□□ -1.43
CDHR3-213ENST00000488386 NCAM1P13591 858 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 PRKCHP24723 683 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 HOXD9P28356 352 aaPredicted RBP6.13□□□□□ -1.43
CDHR3-213ENST00000488386 NTSR1P30989 418 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 PPP1R2P41236 205 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 GPD2P43304 727 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 CORO7P57737 925 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 COG7P83436 770 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 GCNT1Q02742 428 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 CETN1Q12798 172 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 MAP4K2Q12851 820 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 ELF2Q15723 593 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 CNGA2Q16280 664 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 TPD52L1Q16890 204 aaPredicted RBP6.13□□□□□ -1.43
CDHR3-213ENST00000488386 USP39Q53GS9 565 aaKnown RBP6.13□□□□□ -1.43
CDHR3-213ENST00000488386 ACBD5Q5T8D3 534 aaPredicted RBP6.13□□□□□ -1.43
CDHR3-213ENST00000488386 SYPL2Q5VXT5 272 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 NADSYN1Q6IA69 706 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 TRIM65Q6PJ69 517 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 KIAA1324Q6UXG2 1013 aaKnown RBP6.13□□□□□ -1.43
CDHR3-213ENST00000488386 MMS22LQ6ZRQ5 1243 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 ZNF605Q86T29 641 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 TADA2BQ86TJ2 420 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 TAC4Q86UU9 113 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 ARHGAP18Q8N392 663 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 TTC39CQ8N584 583 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 TRIML1Q8N9V2 468 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 OR2I1PQ8NGU4 316 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 OLIG1Q8TAK6 271 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 DQX1Q8TE96 717 aaKnown RBP6.13□□□□□ -1.43
CDHR3-213ENST00000488386 IPO4Q8TEX9 1081 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms