RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 CTBP1Q13363 440 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 KCNMB4Q86W47 210 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 HMGCLL1Q8TB92 370 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 NXNL1Q96CM4 212 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 COG8Q96MW5 612 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 MRPL45Q9BRJ2 306 aaKnown RBP14.36□□□□□ -0.11
COL16A1-214ENST00000488128 FBRSL1Q9HCM7 1045 aaKnown RBP14.36□□□□□ -0.11
COL16A1-214ENST00000488128 RGPD3A6NKT7 1758 aaPredicted RBP14.36□□□□□ -0.11
COL16A1-214ENST00000488128 RGPD4Q7Z3J3 1758 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 TMEM114B3SHH9 223 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 PPEF2O14830 753 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 USP2O75604 605 aaPredicted RBP14.36□□□□□ -0.11
COL16A1-214ENST00000488128 SERPINB7O75635 380 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 NMBRP28336 390 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 ARL4AP40617 200 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 GSTM4Q03013 218 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 POU5F1BQ06416 359 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 ITGADQ13349 1161 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 TARBP2Q15633 366 aaKnown RBP14.36□□□□□ -0.11
COL16A1-214ENST00000488128 CYP2A13Q16696 494 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 DCDC5Q6ZRR9 648 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 SNX29P2Q8IUI4 249 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 CROCCP3Q8IVE0 287 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 LRRC43Q8N309 656 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 TMEM151AQ8N4L1 468 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 DNERQ8NFT8 737 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 GFM2Q969S9 779 aaKnown RBP14.36□□□□□ -0.11
COL16A1-214ENST00000488128 BIRC8Q96P09 236 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 NT5C1AQ9BXI3 368 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 TSPYL2Q9H2G4 693 aaPredicted RBP14.36□□□□□ -0.11
COL16A1-214ENST00000488128 DPEP3Q9H4B8 488 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 PADI4Q9UM07 663 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 PHIPQ8WWQ0 1821 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 IGKV6D-21A0A0A0MT36 114 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 C1orf232A0A0U1RR37 186 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 ZCWPW2A0A1B0GU75 182 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 KANSL1LA0AUZ9 987 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 HEATR9A2RTY3 570 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 MDM4O15151 490 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 YWHAQP27348 245 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 GNL1P36915 607 aaPredicted RBP14.36□□□□□ -0.11
COL16A1-214ENST00000488128 EFNA5P52803 228 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 RABGGTBP53611 331 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 NSUN2Q08J23 767 aaKnown RBP eCLIP14.36□□□□□ -0.11
COL16A1-214ENST00000488128 PRKAA1Q13131 559 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 SURF1Q15526 300 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 DPYSL2Q16555 572 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 PIGZQ86VD9 579 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 IFNEQ86WN2 208 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 SPPL2CQ8IUH8 684 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 TMEM126BQ8IUX1 230 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 DENND6AQ8IWF6 608 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 DDHD1Q8NEL9 900 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 CHST13Q8NET6 341 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 PPP1R10Q96QC0 940 aaKnown RBP14.36□□□□□ -0.11
COL16A1-214ENST00000488128 RPF2Q9H7B2 306 aaKnown RBP14.36□□□□□ -0.11
COL16A1-214ENST00000488128 CACNA2D2Q9NY47 1150 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 GIMAP2Q9UG22 337 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 SLC8A2Q9UPR5 921 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 RLFQ13129 1914 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 CITO14578 2027 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 NCAM1P13591 858 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 CCDC130P13994 396 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 BMXP51813 675 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 GJA9P57773 515 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 FASTKQ14296 549 aaKnown RBP14.35□□□□□ -0.11
COL16A1-214ENST00000488128 RAB39AQ14964 217 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 REP15Q6BDI9 236 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 CNSTQ6PJW8 725 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 LCLAT1Q6UWP7 414 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 LBX2Q6XYB7 198 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 CYS1Q717R9 158 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 CLEC14AQ86T13 490 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 ZC3H7AQ8IWR0 971 aaKnown RBP14.35□□□□□ -0.11
COL16A1-214ENST00000488128 SLC35B4Q969S0 331 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 GPATCH1Q9BRR8 931 aaKnown RBP14.35□□□□□ -0.11
COL16A1-214ENST00000488128 MTG1Q9BT17 334 aaPredicted RBP14.35□□□□□ -0.11
COL16A1-214ENST00000488128 FTHL17Q9BXU8 183 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 SPON1Q9HCB6 807 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 TRIM17Q9Y577 477 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 EVPLQ92817 2033 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 MAFO75444 373 aaPredicted RBP14.35□□□□□ -0.11
COL16A1-214ENST00000488128 TADA2AO75478 443 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 ATP6V1B2P21281 511 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 HMOX2P30519 316 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 C1QTNF8P60827 252 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 MAMDC4Q6UXC1 1216 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 KDM1BQ8NB78 822 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 TBC1D15Q8TC07 691 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 SEPT1Q8WYJ6 367 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 TFAP2CQ92754 450 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 COPS5Q92905 334 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 TSNARE1Q96NA8 513 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 ZNF385DQ9H6B1 395 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 LRRC40Q9H9A6 602 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 GPRC5DQ9NZD1 345 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 BFARQ9NZS9 450 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 SSC5DA1L4H1 1573 aa14.35□□□□□ -0.11
COL16A1-214ENST00000488128 SDHDO14521 159 aa14.34□□□□□ -0.11
COL16A1-214ENST00000488128 MLNP12872 115 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms