RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 ARRB1P49407 418 aaPredicted RBP13.1□□□□□ -0.31
CHMP3-208ENST00000486404 ZNF135P52742 658 aaPredicted RBP13.1□□□□□ -0.31
CHMP3-208ENST00000486404 SERINC3Q13530 473 aa13.1□□□□□ -0.31
CHMP3-208ENST00000486404 PIGHQ14442 188 aaPredicted RBP13.1□□□□□ -0.31
CHMP3-208ENST00000486404 STAT4Q14765 748 aa13.1□□□□□ -0.31
CHMP3-208ENST00000486404 ACAP1Q15027 740 aa13.1□□□□□ -0.31
CHMP3-208ENST00000486404 CA9Q16790 459 aa13.1□□□□□ -0.31
CHMP3-208ENST00000486404 SMTNL2Q2TAL5 461 aa13.1□□□□□ -0.31
CHMP3-208ENST00000486404 CCDC122Q5T0U0 273 aa13.1□□□□□ -0.31
CHMP3-208ENST00000486404 ATXN7L2Q5T6C5 722 aaPredicted RBP13.1□□□□□ -0.31
CHMP3-208ENST00000486404 NEK5Q6P3R8 708 aa13.1□□□□□ -0.31
CHMP3-208ENST00000486404 PARS2Q7L3T8 475 aaKnown RBP13.1□□□□□ -0.31
CHMP3-208ENST00000486404 HORMAD1Q86X24 394 aa13.1□□□□□ -0.31
CHMP3-208ENST00000486404 PSTKQ8IV42 348 aaKnown RBP13.1□□□□□ -0.31
CHMP3-208ENST00000486404 UMODL1-AS1Q8N2C9 162 aa13.1□□□□□ -0.31
CHMP3-208ENST00000486404 CELF6Q96J87 481 aaKnown RBP13.1□□□□□ -0.31
CHMP3-208ENST00000486404 LRIG1Q96JA1 1093 aa13.1□□□□□ -0.31
CHMP3-208ENST00000486404 CAMK1GQ96NX5 476 aa13.1□□□□□ -0.31
CHMP3-208ENST00000486404 KCTD15Q96SI1 283 aaPredicted RBP13.1□□□□□ -0.31
CHMP3-208ENST00000486404 MYOCQ99972 504 aa13.1□□□□□ -0.31
CHMP3-208ENST00000486404 NOL6Q9H6R4 1146 aaKnown RBP13.1□□□□□ -0.31
CHMP3-208ENST00000486404 EBF2Q9HAK2 575 aa13.1□□□□□ -0.31
CHMP3-208ENST00000486404 SP110Q9HB58 689 aa13.1□□□□□ -0.31
CHMP3-208ENST00000486404 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.1□□□□□ -0.31
CHMP3-208ENST00000486404 PCDHGB2Q9Y5G2 931 aa13.1□□□□□ -0.31
CHMP3-208ENST00000486404 CABIN1Q9Y6J0 2220 aa13.09□□□□□ -0.31
CHMP3-208ENST00000486404 PRAMEF26H0Y7S4 382 aa13.09□□□□□ -0.31
CHMP3-208ENST00000486404 DFFAO00273 331 aa13.09□□□□□ -0.31
CHMP3-208ENST00000486404 CD160O95971 181 aa13.09□□□□□ -0.31
CHMP3-208ENST00000486404 AKT2P31751 481 aa13.09□□□□□ -0.31
CHMP3-208ENST00000486404 PCK1P35558 622 aa13.09□□□□□ -0.31
CHMP3-208ENST00000486404 NDST2P52849 883 aa13.09□□□□□ -0.31
CHMP3-208ENST00000486404 TAS2R38P59533 333 aa13.09□□□□□ -0.31
CHMP3-208ENST00000486404 TRIP6Q15654 476 aaKnown RBP13.09□□□□□ -0.31
CHMP3-208ENST00000486404 ZNF423Q2M1K9 1284 aa13.09□□□□□ -0.31
CHMP3-208ENST00000486404 INO80DQ53TQ3 878 aaPredicted RBP13.09□□□□□ -0.31
CHMP3-208ENST00000486404 KCNT1Q5JUK3 1230 aa13.09□□□□□ -0.31
CHMP3-208ENST00000486404 CFAP58Q5T655 872 aa13.09□□□□□ -0.31
CHMP3-208ENST00000486404 KIAA1161Q6NSJ0 714 aa13.09□□□□□ -0.31
CHMP3-208ENST00000486404 ALKBH5Q6P6C2 394 aaKnown RBP13.09□□□□□ -0.31
CHMP3-208ENST00000486404 PLPP6Q8IY26 295 aa13.09□□□□□ -0.31
CHMP3-208ENST00000486404 OXR1Q8N573 874 aa13.09□□□□□ -0.31
CHMP3-208ENST00000486404 PAF1Q8N7H5 531 aa13.09□□□□□ -0.31
CHMP3-208ENST00000486404 CTNNBL1Q8WYA6 563 aaPredicted RBP13.09□□□□□ -0.31
CHMP3-208ENST00000486404 HSPH1Q92598 858 aa13.09□□□□□ -0.31
CHMP3-208ENST00000486404 ARHGEF26Q96DR7 871 aa13.09□□□□□ -0.31
CHMP3-208ENST00000486404 EXOC2Q96KP1 924 aa13.09□□□□□ -0.31
CHMP3-208ENST00000486404 IP6K2Q9UHH9 426 aa13.09□□□□□ -0.31
CHMP3-208ENST00000486404 PCOLCE2Q9UKZ9 415 aa13.09□□□□□ -0.31
CHMP3-208ENST00000486404 COL5A1P20908 1838 aaPredicted RBP13.09□□□□□ -0.31
CHMP3-208ENST00000486404 TLR4O00206 839 aa13.08□□□□□ -0.32
CHMP3-208ENST00000486404 KCNK3O14649 394 aa13.08□□□□□ -0.32
CHMP3-208ENST00000486404 SLC31A1O15431 190 aa13.08□□□□□ -0.32
CHMP3-208ENST00000486404 TRIM16O95361 564 aa13.08□□□□□ -0.32
CHMP3-208ENST00000486404 POP4O95707 220 aaKnown RBP13.08□□□□□ -0.32
CHMP3-208ENST00000486404 WNT1P04628 370 aa13.08□□□□□ -0.32
CHMP3-208ENST00000486404 ERCC2P18074 760 aa13.08□□□□□ -0.32
CHMP3-208ENST00000486404 HNRNPA2B1P22626 353 aaKnown RBP13.08□□□□□ -0.32
CHMP3-208ENST00000486404 XPAP23025 273 aaPredicted RBP13.08□□□□□ -0.32
CHMP3-208ENST00000486404 GKP32189 559 aa13.08□□□□□ -0.32
CHMP3-208ENST00000486404 GJC1P36383 396 aa13.08□□□□□ -0.32
CHMP3-208ENST00000486404 EIF4A3P38919 411 aaKnown RBP13.08□□□□□ -0.32
CHMP3-208ENST00000486404 GRK6P43250 576 aa13.08□□□□□ -0.32
CHMP3-208ENST00000486404 NXPH1P58417 271 aa13.08□□□□□ -0.32
CHMP3-208ENST00000486404 RPS21P63220 83 aaKnown RBP13.08□□□□□ -0.32
CHMP3-208ENST00000486404 SHC2P98077 582 aa13.08□□□□□ -0.32
CHMP3-208ENST00000486404 OVGP1Q12889 678 aa13.08□□□□□ -0.32
CHMP3-208ENST00000486404 KRT81Q14533 505 aa13.08□□□□□ -0.32
CHMP3-208ENST00000486404 MYLK3Q32MK0 819 aa13.08□□□□□ -0.32
CHMP3-208ENST00000486404 ZNF805Q5CZA5 627 aa13.08□□□□□ -0.32
CHMP3-208ENST00000486404 GDPD4Q6W3E5 623 aa13.08□□□□□ -0.32
CHMP3-208ENST00000486404 IQCHQ86VS3 1027 aa13.08□□□□□ -0.32
CHMP3-208ENST00000486404 ZSCAN30Q86W11 494 aa13.08□□□□□ -0.32
CHMP3-208ENST00000486404 ARFGAP1Q8N6T3 406 aa13.08□□□□□ -0.32
CHMP3-208ENST00000486404 MFSD2AQ8NA29 543 aa13.08□□□□□ -0.32
CHMP3-208ENST00000486404 ZNF564Q8TBZ8 553 aaPredicted RBP13.08□□□□□ -0.32
CHMP3-208ENST00000486404 RHBDD1Q8TEB9 315 aa13.08□□□□□ -0.32
CHMP3-208ENST00000486404 KLK6Q92876 244 aa13.08□□□□□ -0.32
CHMP3-208ENST00000486404 RAB7BQ96AH8 199 aa13.08□□□□□ -0.32
CHMP3-208ENST00000486404 KLHL32Q96NJ5 620 aa13.08□□□□□ -0.32
CHMP3-208ENST00000486404 ELF4Q99607 663 aaPredicted RBP13.08□□□□□ -0.32
CHMP3-208ENST00000486404 CDC6Q99741 560 aa13.08□□□□□ -0.32
CHMP3-208ENST00000486404 KLC2Q9H0B6 622 aa13.08□□□□□ -0.32
CHMP3-208ENST00000486404 CTTNBP2NLQ9P2B4 639 aa13.08□□□□□ -0.32
CHMP3-208ENST00000486404 ARHGAP20Q9P2F6 1191 aa13.08□□□□□ -0.32
CHMP3-208ENST00000486404 APOBEC2Q9Y235 224 aaKnown RBP13.08□□□□□ -0.32
CHMP3-208ENST00000486404 CHD8Q9HCK8 2581 aa13.08□□□□□ -0.32
CHMP3-208ENST00000486404 CEP295Q9C0D2 2601 aa13.08□□□□□ -0.32
CHMP3-208ENST00000486404 ACACBO00763 2458 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 LRRK1Q38SD2 2015 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 A0A1B0GTQ1 180 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 A0A1W2PR77 199 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 C16orf96A6NNT2 1141 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 C10orf142B7Z368 130 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 MYO1FO00160 1098 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 RNF103O00237 685 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 WNT9AO14904 365 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 AP1G1O43747 822 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 AKR1B10O60218 316 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 PCDHGA12O60330 932 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms