RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 SRRTQ9BXP5 876 aaKnown RBP8.45□□□□□ -1.06
XRN1-212ENST00000486211 ULBP1Q9BZM6 244 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 UBXN6Q9BZV1 441 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 AGPAT3Q9NRZ7 376 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 CEP83Q9Y592 693 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 PCDHGA3Q9Y5H0 932 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 RNF215Q9Y6U7 377 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 UNC13CQ8NB66 2214 aa8.44□□□□□ -1.06
XRN1-212ENST00000486211 ATP9BO43861 1147 aa8.44□□□□□ -1.06
XRN1-212ENST00000486211 MOCS3O95396 460 aa8.44□□□□□ -1.06
XRN1-212ENST00000486211 ASS1P00966 412 aaKnown RBP8.44□□□□□ -1.06
XRN1-212ENST00000486211 PDGFAP04085 211 aa8.44□□□□□ -1.06
XRN1-212ENST00000486211 IDEP14735 1019 aa8.44□□□□□ -1.06
XRN1-212ENST00000486211 LONP1P36776 959 aaKnown RBP8.44□□□□□ -1.06
XRN1-212ENST00000486211 RECQLP46063 649 aaPredicted RBP8.44□□□□□ -1.06
XRN1-212ENST00000486211 SLC11A2P49281 568 aa8.44□□□□□ -1.06
XRN1-212ENST00000486211 CYP2J2P51589 502 aa8.44□□□□□ -1.06
XRN1-212ENST00000486211 TKTL1P51854 596 aa8.44□□□□□ -1.06
XRN1-212ENST00000486211 HMGN5P82970 282 aaKnown RBP8.44□□□□□ -1.06
XRN1-212ENST00000486211 MRPL49Q13405 166 aaKnown RBP8.44□□□□□ -1.06
XRN1-212ENST00000486211 BIRC3Q13489 604 aa8.44□□□□□ -1.06
XRN1-212ENST00000486211 DEFB109BQ30KR1 87 aa8.44□□□□□ -1.06
XRN1-212ENST00000486211 DCAF6Q58WW2 860 aa8.44□□□□□ -1.06
XRN1-212ENST00000486211 MS4A13Q5J8X5 152 aa8.44□□□□□ -1.06
XRN1-212ENST00000486211 EFHC2Q5JST6 749 aa8.44□□□□□ -1.06
XRN1-212ENST00000486211 TMEM164Q5U3C3 297 aa8.44□□□□□ -1.06
XRN1-212ENST00000486211 BSPRYQ5W0U4 402 aa8.44□□□□□ -1.06
XRN1-212ENST00000486211 MSANTD2Q6P1R3 559 aa8.44□□□□□ -1.06
XRN1-212ENST00000486211 ASB18Q6ZVZ8 466 aa8.44□□□□□ -1.06
XRN1-212ENST00000486211 TIPARPQ7Z3E1 657 aaKnown RBP8.44□□□□□ -1.06
XRN1-212ENST00000486211 PHACTR4Q8IZ21 702 aa8.44□□□□□ -1.06
XRN1-212ENST00000486211 CACNA2D3Q8IZS8 1091 aa8.44□□□□□ -1.06
XRN1-212ENST00000486211 PDCD6IPQ8WUM4 868 aaKnown RBP8.44□□□□□ -1.06
XRN1-212ENST00000486211 AZIN2Q96A70 460 aa8.44□□□□□ -1.06
XRN1-212ENST00000486211 NT5C1AQ9BXI3 368 aa8.44□□□□□ -1.06
XRN1-212ENST00000486211 SLC17A9Q9BYT1 436 aa8.44□□□□□ -1.06
XRN1-212ENST00000486211 NUCKS1Q9H1E3 243 aaKnown RBP8.44□□□□□ -1.06
XRN1-212ENST00000486211 SEMA6CQ9H3T2 930 aa8.44□□□□□ -1.06
XRN1-212ENST00000486211 PRM3Q9NNZ6 103 aa8.44□□□□□ -1.06
XRN1-212ENST00000486211 ENAMQ9NRM1 1142 aa8.44□□□□□ -1.06
XRN1-212ENST00000486211 PANK4Q9NVE7 773 aa8.44□□□□□ -1.06
XRN1-212ENST00000486211 SIRPGQ9P1W8 387 aa8.44□□□□□ -1.06
XRN1-212ENST00000486211 GULP1Q9UBP9 304 aa8.44□□□□□ -1.06
XRN1-212ENST00000486211 TRPM6Q9BX84 2022 aa8.44□□□□□ -1.06
XRN1-212ENST00000486211 AKAP9Q99996 3911 aa8.44□□□□□ -1.06
XRN1-212ENST00000486211 ABCA2Q9BZC7 2435 aa8.43□□□□□ -1.06
XRN1-212ENST00000486211 LRRIQ3A6PVS8 624 aaPredicted RBP8.43□□□□□ -1.06
XRN1-212ENST00000486211 YJEFN3A6XGL0 299 aa8.43□□□□□ -1.06
XRN1-212ENST00000486211 TCP11X1B4DZS4 312 aa8.43□□□□□ -1.06
XRN1-212ENST00000486211 E7ENQ6 273 aa8.43□□□□□ -1.06
XRN1-212ENST00000486211 TULP2O00295 520 aa8.43□□□□□ -1.06
XRN1-212ENST00000486211 CLIC2O15247 247 aa8.43□□□□□ -1.06
XRN1-212ENST00000486211 CLSTN1O94985 981 aa8.43□□□□□ -1.06
XRN1-212ENST00000486211 PCDH8O95206 1070 aa8.43□□□□□ -1.06
XRN1-212ENST00000486211 PAK4O96013 591 aaPredicted RBP8.43□□□□□ -1.06
XRN1-212ENST00000486211 FGF3P11487 239 aaPredicted RBP8.43□□□□□ -1.06
XRN1-212ENST00000486211 P4HA1P13674 534 aa8.43□□□□□ -1.06
XRN1-212ENST00000486211 RHOQP17081 205 aa8.43□□□□□ -1.06
XRN1-212ENST00000486211 NNMTP40261 264 aa8.43□□□□□ -1.06
XRN1-212ENST00000486211 SEPT6Q14141 434 aa8.43□□□□□ -1.06
XRN1-212ENST00000486211 ARHGAP44Q17R89 818 aa8.43□□□□□ -1.06
XRN1-212ENST00000486211 SGSM1Q2NKQ1 1148 aa8.43□□□□□ -1.06
XRN1-212ENST00000486211 ATP1A1-AS1Q5TC04 95 aa8.43□□□□□ -1.06
XRN1-212ENST00000486211 EPM2AIP1Q7L775 607 aaPredicted RBP8.43□□□□□ -1.06
XRN1-212ENST00000486211 UNC45BQ8IWX7 931 aa8.43□□□□□ -1.06
XRN1-212ENST00000486211 CCDC13Q8IYE1 715 aa8.43□□□□□ -1.06
XRN1-212ENST00000486211 Q8N9G6 341 aaPredicted RBP8.43□□□□□ -1.06
XRN1-212ENST00000486211 FAM184AQ8NB25 1140 aa8.43□□□□□ -1.06
XRN1-212ENST00000486211 XXYLT1Q8NBI6 393 aa8.43□□□□□ -1.06
XRN1-212ENST00000486211 PCDH19Q8TAB3 1148 aa8.43□□□□□ -1.06
XRN1-212ENST00000486211 RNF139Q8WU17 664 aa8.43□□□□□ -1.06
XRN1-212ENST00000486211 ERCC4Q92889 916 aaPredicted RBP8.43□□□□□ -1.06
XRN1-212ENST00000486211 EPSTI1Q96J88 318 aa8.43□□□□□ -1.06
XRN1-212ENST00000486211 LENG8Q96PV6 779 aaPredicted RBP8.43□□□□□ -1.06
XRN1-212ENST00000486211 TAAR9Q96RI9 348 aa8.43□□□□□ -1.06
XRN1-212ENST00000486211 UNKQ9C0B0 810 aaKnown RBP8.43□□□□□ -1.06
XRN1-212ENST00000486211 IPO11Q9UI26 975 aaKnown RBP8.43□□□□□ -1.06
XRN1-212ENST00000486211 APPL1Q9UKG1 709 aa8.43□□□□□ -1.06
XRN1-212ENST00000486211 B3GALT1Q9Y5Z6 326 aa8.43□□□□□ -1.06
XRN1-212ENST00000486211 KCNMB2Q9Y691 235 aa8.43□□□□□ -1.06
XRN1-212ENST00000486211 NAV3Q8IVL0 2385 aa8.43□□□□□ -1.06
XRN1-212ENST00000486211 HNRNPRO43390 633 aaKnown RBP8.42□□□□□ -1.06
XRN1-212ENST00000486211 RAD1O60671 282 aa8.42□□□□□ -1.06
XRN1-212ENST00000486211 SORBS2O94875 1100 aaKnown RBP8.42□□□□□ -1.06
XRN1-212ENST00000486211 PDGFRAP16234 1089 aa8.42□□□□□ -1.06
XRN1-212ENST00000486211 PLK1P53350 603 aa8.42□□□□□ -1.06
XRN1-212ENST00000486211 AP3M2P53677 418 aa8.42□□□□□ -1.06
XRN1-212ENST00000486211 RPS21P63220 83 aaKnown RBP8.42□□□□□ -1.06
XRN1-212ENST00000486211 SULT2A1Q06520 285 aa8.42□□□□□ -1.06
XRN1-212ENST00000486211 DLG2Q15700 870 aa8.42□□□□□ -1.06
XRN1-212ENST00000486211 ZACNQ401N2 412 aa8.42□□□□□ -1.06
XRN1-212ENST00000486211 CRTC2Q53ET0 693 aaPredicted RBP8.42□□□□□ -1.06
XRN1-212ENST00000486211 PHF19Q5T6S3 580 aa8.42□□□□□ -1.06
XRN1-212ENST00000486211 KIAA1161Q6NSJ0 714 aa8.42□□□□□ -1.06
XRN1-212ENST00000486211 LVRNQ6Q4G3 990 aa8.42□□□□□ -1.06
XRN1-212ENST00000486211 ERN2Q76MJ5 926 aaKnown RBP8.42□□□□□ -1.06
XRN1-212ENST00000486211 SV2BQ7L1I2 683 aa8.42□□□□□ -1.06
XRN1-212ENST00000486211 SPRED1Q7Z699 444 aa8.42□□□□□ -1.06
XRN1-212ENST00000486211 CCDC117Q8IWD4 279 aaPredicted RBP8.42□□□□□ -1.06
XRN1-212ENST00000486211 GPR156Q8NFN8 814 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms