RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 HORMAD1Q86X24 394 aa17.94■□□□□ 0.46
COL6A1-204ENST00000486023 CHCHD4Q8N4Q1 142 aa17.94■□□□□ 0.46
COL6A1-204ENST00000486023 FAM131CQ96AQ9 280 aa17.94■□□□□ 0.46
COL6A1-204ENST00000486023 ISG20Q96AZ6 181 aaKnown RBP17.94■□□□□ 0.46
COL6A1-204ENST00000486023 ELF4Q99607 663 aaPredicted RBP17.94■□□□□ 0.46
COL6A1-204ENST00000486023 NUP85Q9BW27 656 aa17.94■□□□□ 0.46
COL6A1-204ENST00000486023 SCNM1Q9BWG6 230 aa17.94■□□□□ 0.46
COL6A1-204ENST00000486023 SLC39A8Q9C0K1 460 aa17.94■□□□□ 0.46
COL6A1-204ENST00000486023 TPX2Q9ULW0 747 aaKnown RBP17.94■□□□□ 0.46
COL6A1-204ENST00000486023 DMTF1Q9Y222 760 aa17.94■□□□□ 0.46
COL6A1-204ENST00000486023 CACNA1EQ15878 2313 aa17.93■□□□□ 0.46
COL6A1-204ENST00000486023 C16orf96A6NNT2 1141 aa17.93■□□□□ 0.46
COL6A1-204ENST00000486023 WASH4PA8MWX3 477 aa17.93■□□□□ 0.46
COL6A1-204ENST00000486023 PRAMEF26H0Y7S4 382 aa17.93■□□□□ 0.46
COL6A1-204ENST00000486023 FLRT2O43155 660 aa17.93■□□□□ 0.46
COL6A1-204ENST00000486023 GSRP00390 522 aa17.93■□□□□ 0.46
COL6A1-204ENST00000486023 ITGAVP06756 1048 aa17.93■□□□□ 0.46
COL6A1-204ENST00000486023 TCF4P15884 667 aa17.93■□□□□ 0.46
COL6A1-204ENST00000486023 ITGB7P26010 798 aa17.93■□□□□ 0.46
COL6A1-204ENST00000486023 EIF4A3P38919 411 aaKnown RBP17.93■□□□□ 0.46
COL6A1-204ENST00000486023 PAPOLAP51003 745 aaKnown RBP17.93■□□□□ 0.46
COL6A1-204ENST00000486023 CLDN2P57739 230 aa17.93■□□□□ 0.46
COL6A1-204ENST00000486023 RAD51Q06609 339 aa17.93■□□□□ 0.46
COL6A1-204ENST00000486023 ALKBH5Q6P6C2 394 aaKnown RBP17.93■□□□□ 0.46
COL6A1-204ENST00000486023 RFX8Q6ZV50 586 aa17.93■□□□□ 0.46
COL6A1-204ENST00000486023 UMODL1-AS1Q8N2C9 162 aa17.93■□□□□ 0.46
COL6A1-204ENST00000486023 MFSD2AQ8NA29 543 aa17.93■□□□□ 0.46
COL6A1-204ENST00000486023 FNIP1Q8TF40 1166 aa17.93■□□□□ 0.46
COL6A1-204ENST00000486023 ARHGEF26Q96DR7 871 aa17.93■□□□□ 0.46
COL6A1-204ENST00000486023 IQCDQ96DY2 449 aa17.93■□□□□ 0.46
COL6A1-204ENST00000486023 KLHDC7BQ96G42 594 aa17.93■□□□□ 0.46
COL6A1-204ENST00000486023 FEM1CQ96JP0 617 aa17.93■□□□□ 0.46
COL6A1-204ENST00000486023 GDAP1L1Q96MZ0 367 aa17.93■□□□□ 0.46
COL6A1-204ENST00000486023 NCAPGQ9BPX3 1015 aa17.93■□□□□ 0.46
COL6A1-204ENST00000486023 DONSONQ9NYP3 566 aa17.93■□□□□ 0.46
COL6A1-204ENST00000486023 UBA2Q9UBT2 640 aaPredicted RBP17.93■□□□□ 0.46
COL6A1-204ENST00000486023 ANAPC7Q9UJX3 599 aa17.93■□□□□ 0.46
COL6A1-204ENST00000486023 ZFR2Q9UPR6 939 aaKnown RBP17.93■□□□□ 0.46
COL6A1-204ENST00000486023 PCDHGB2Q9Y5G2 931 aa17.93■□□□□ 0.46
COL6A1-204ENST00000486023 CHD8Q9HCK8 2581 aa17.92■□□□□ 0.46
COL6A1-204ENST00000486023 KNL1Q8NG31 2342 aa17.92■□□□□ 0.46
COL6A1-204ENST00000486023 A0A1B0GTQ1 180 aa17.92■□□□□ 0.46
COL6A1-204ENST00000486023 INSIG1O15503 277 aa17.92■□□□□ 0.46
COL6A1-204ENST00000486023 IGSF6O95976 241 aa17.92■□□□□ 0.46
COL6A1-204ENST00000486023 PAK4O96013 591 aaPredicted RBP17.92■□□□□ 0.46
COL6A1-204ENST00000486023 FTH1P19P0C7X4 201 aa17.92■□□□□ 0.46
COL6A1-204ENST00000486023 ERCC2P18074 760 aa17.92■□□□□ 0.46
COL6A1-204ENST00000486023 AKT2P31751 481 aa17.92■□□□□ 0.46
COL6A1-204ENST00000486023 NXPH1P58417 271 aa17.92■□□□□ 0.46
COL6A1-204ENST00000486023 BNIP3Q12983 259 aa17.92■□□□□ 0.46
COL6A1-204ENST00000486023 CYTH1Q15438 398 aa17.92■□□□□ 0.46
COL6A1-204ENST00000486023 ZNF284Q2VY69 593 aa17.92■□□□□ 0.46
COL6A1-204ENST00000486023 ZNF805Q5CZA5 627 aa17.92■□□□□ 0.46
COL6A1-204ENST00000486023 NEK5Q6P3R8 708 aa17.92■□□□□ 0.46
COL6A1-204ENST00000486023 GDPD4Q6W3E5 623 aa17.92■□□□□ 0.46
COL6A1-204ENST00000486023 TTC7BQ86TV6 843 aa17.92■□□□□ 0.46
COL6A1-204ENST00000486023 CALN1Q9BXU9 219 aa17.92■□□□□ 0.46
COL6A1-204ENST00000486023 DEF6Q9H4E7 631 aa17.92■□□□□ 0.46
COL6A1-204ENST00000486023 CWC15Q9P013 229 aaKnown RBP17.92■□□□□ 0.46
COL6A1-204ENST00000486023 ITM2BQ9Y287 266 aa17.92■□□□□ 0.46
COL6A1-204ENST00000486023 FADS3Q9Y5Q0 445 aa17.92■□□□□ 0.46
COL6A1-204ENST00000486023 CEP295Q9C0D2 2601 aa17.91■□□□□ 0.46
COL6A1-204ENST00000486023 ARHGAP42A6NI28 874 aa17.91■□□□□ 0.46
COL6A1-204ENST00000486023 DFNA5O60443 496 aa17.91■□□□□ 0.46
COL6A1-204ENST00000486023 MAGEC1O60732 1142 aa17.91■□□□□ 0.46
COL6A1-204ENST00000486023 CBFA2T3O75081 653 aa17.91■□□□□ 0.46
COL6A1-204ENST00000486023 THEGLP0DJG4 465 aa17.91■□□□□ 0.46
COL6A1-204ENST00000486023 ITIH2P19823 946 aa17.91■□□□□ 0.46
COL6A1-204ENST00000486023 IL1R2P27930 398 aa17.91■□□□□ 0.46
COL6A1-204ENST00000486023 HTR7P34969 479 aa17.91■□□□□ 0.46
COL6A1-204ENST00000486023 GJC1P36383 396 aa17.91■□□□□ 0.46
COL6A1-204ENST00000486023 NUDT1P36639 197 aa17.91■□□□□ 0.46
COL6A1-204ENST00000486023 GRK6P43250 576 aa17.91■□□□□ 0.46
COL6A1-204ENST00000486023 ARRB1P49407 418 aaPredicted RBP17.91■□□□□ 0.46
COL6A1-204ENST00000486023 NDST2P52849 883 aa17.91■□□□□ 0.46
COL6A1-204ENST00000486023 SGCGQ13326 291 aa17.91■□□□□ 0.46
COL6A1-204ENST00000486023 PIGHQ14442 188 aaPredicted RBP17.91■□□□□ 0.46
COL6A1-204ENST00000486023 TSR1Q2NL82 804 aaKnown RBP17.91■□□□□ 0.46
COL6A1-204ENST00000486023 INO80DQ53TQ3 878 aaPredicted RBP17.91■□□□□ 0.46
COL6A1-204ENST00000486023 SPECC1LQ69YQ0 1117 aa17.91■□□□□ 0.46
COL6A1-204ENST00000486023 SLCO6A1Q86UG4 719 aa17.91■□□□□ 0.46
COL6A1-204ENST00000486023 SPATS2Q86XZ4 545 aaKnown RBP17.91■□□□□ 0.46
COL6A1-204ENST00000486023 PLPP6Q8IY26 295 aa17.91■□□□□ 0.46
COL6A1-204ENST00000486023 PAF1Q8N7H5 531 aa17.91■□□□□ 0.46
COL6A1-204ENST00000486023 SLC17A9Q9BYT1 436 aa17.91■□□□□ 0.46
COL6A1-204ENST00000486023 LRRC19Q9H756 370 aa17.91■□□□□ 0.46
COL6A1-204ENST00000486023 SP110Q9HB58 689 aa17.91■□□□□ 0.46
COL6A1-204ENST00000486023 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.91■□□□□ 0.46
COL6A1-204ENST00000486023 IP6K2Q9UHH9 426 aa17.91■□□□□ 0.46
COL6A1-204ENST00000486023 GGT7Q9UJ14 662 aa17.91■□□□□ 0.46
COL6A1-204ENST00000486023 KLK13Q9UKR3 277 aa17.91■□□□□ 0.46
COL6A1-204ENST00000486023 DOCK4Q8N1I0 1966 aa17.9■□□□□ 0.46
COL6A1-204ENST00000486023 IGLON5A6NGN9 336 aa17.9■□□□□ 0.46
COL6A1-204ENST00000486023 C10orf142B7Z368 130 aa17.9■□□□□ 0.46
COL6A1-204ENST00000486023 H3BRJ5 948 aa17.9■□□□□ 0.46
COL6A1-204ENST00000486023 SDC3O75056 442 aa17.9■□□□□ 0.46
COL6A1-204ENST00000486023 PALMO75781 387 aa17.9■□□□□ 0.46
COL6A1-204ENST00000486023 PIGNO95427 931 aa17.9■□□□□ 0.46
COL6A1-204ENST00000486023 TPM1P09493 284 aa17.9■□□□□ 0.46
COL6A1-204ENST00000486023 ATXN1LP0C7T5 689 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms