RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 RRP7AQ9Y3A4 280 aaKnown RBP5.18□□□□□ -1.58
CCDC66-219ENST00000484441 PCDHGB3Q9Y5G1 929 aa5.18□□□□□ -1.58
CCDC66-219ENST00000484441 VWA3AA6NCI4 1184 aa5.17□□□□□ -1.58
CCDC66-219ENST00000484441 FAM90A7PA6NKC0 464 aa5.17□□□□□ -1.58
CCDC66-219ENST00000484441 FAM90A22PA8MWA6 464 aa5.17□□□□□ -1.58
CCDC66-219ENST00000484441 FAM90A12PA8MX19 464 aa5.17□□□□□ -1.58
CCDC66-219ENST00000484441 FAM90A23PA8MXZ1 464 aa5.17□□□□□ -1.58
CCDC66-219ENST00000484441 ASAP2O43150 1006 aa5.17□□□□□ -1.58
CCDC66-219ENST00000484441 CBX6O95503 412 aa5.17□□□□□ -1.58
CCDC66-219ENST00000484441 TGFB3P10600 412 aa5.17□□□□□ -1.58
CCDC66-219ENST00000484441 NAGAP17050 411 aa5.17□□□□□ -1.58
CCDC66-219ENST00000484441 CTPS1P17812 591 aa5.17□□□□□ -1.58
CCDC66-219ENST00000484441 GOLGA8FQ08AF8 430 aa5.17□□□□□ -1.58
CCDC66-219ENST00000484441 FAM27E3Q08E93 113 aa5.17□□□□□ -1.58
CCDC66-219ENST00000484441 KIF5AQ12840 1032 aa5.17□□□□□ -1.58
CCDC66-219ENST00000484441 TRAF2Q12933 501 aa5.17□□□□□ -1.58
CCDC66-219ENST00000484441 ATG9BQ674R7 924 aa5.17□□□□□ -1.58
CCDC66-219ENST00000484441 NADSYN1Q6IA69 706 aa5.17□□□□□ -1.58
CCDC66-219ENST00000484441 MON1BQ7L1V2 547 aa5.17□□□□□ -1.58
CCDC66-219ENST00000484441 C2CD5Q86YS7 1000 aa5.17□□□□□ -1.58
CCDC66-219ENST00000484441 TMEM170AQ8WVE7 144 aa5.17□□□□□ -1.58
CCDC66-219ENST00000484441 ATOH1Q92858 354 aaPredicted RBP5.17□□□□□ -1.58
CCDC66-219ENST00000484441 SH3KBP1Q96B97 665 aa5.17□□□□□ -1.58
CCDC66-219ENST00000484441 GFM1Q96RP9 751 aaKnown RBP5.17□□□□□ -1.58
CCDC66-219ENST00000484441 TWNKQ96RR1 684 aa5.17□□□□□ -1.58
CCDC66-219ENST00000484441 CLSTN3Q9BQT9 956 aa5.17□□□□□ -1.58
CCDC66-219ENST00000484441 NPFFR1Q9GZQ6 430 aa5.17□□□□□ -1.58
CCDC66-219ENST00000484441 MVB12BQ9H7P6 319 aa5.17□□□□□ -1.58
CCDC66-219ENST00000484441 NOD2Q9HC29 1040 aa5.17□□□□□ -1.58
CCDC66-219ENST00000484441 ITM2CQ9NQX7 267 aa5.17□□□□□ -1.58
CCDC66-219ENST00000484441 PRSS44E7EML9 344 aa5.16□□□□□ -1.58
CCDC66-219ENST00000484441 ACOT8O14734 319 aa5.16□□□□□ -1.58
CCDC66-219ENST00000484441 PEX14O75381 377 aa5.16□□□□□ -1.58
CCDC66-219ENST00000484441 PPP1R3DO95685 299 aa5.16□□□□□ -1.58
CCDC66-219ENST00000484441 RXRAP19793 462 aa5.16□□□□□ -1.58
CCDC66-219ENST00000484441 PAPOLAP51003 745 aaKnown RBP5.16□□□□□ -1.58
CCDC66-219ENST00000484441 SEC61A1P61619 476 aaKnown RBP5.16□□□□□ -1.58
CCDC66-219ENST00000484441 TRAF3Q13114 568 aa5.16□□□□□ -1.58
CCDC66-219ENST00000484441 SLC18A3Q16572 532 aa5.16□□□□□ -1.58
CCDC66-219ENST00000484441 FBXO43Q4G163 708 aa5.16□□□□□ -1.58
CCDC66-219ENST00000484441 CAPRIN2Q6IMN6 1127 aaKnown RBP5.16□□□□□ -1.58
CCDC66-219ENST00000484441 LHPPQ9H008 270 aa5.16□□□□□ -1.58
CCDC66-219ENST00000484441 LMAN2LQ9H0V9 348 aa5.16□□□□□ -1.58
CCDC66-219ENST00000484441 STN1Q9H668 368 aaKnown RBP5.16□□□□□ -1.58
CCDC66-219ENST00000484441 AGO1Q9UL18 857 aaKnown RBP5.16□□□□□ -1.58
CCDC66-219ENST00000484441 IFRD1O00458 451 aaPredicted RBP5.15□□□□□ -1.59
CCDC66-219ENST00000484441 IL1AP01583 271 aa5.15□□□□□ -1.59
CCDC66-219ENST00000484441 CHRM4P08173 479 aa5.15□□□□□ -1.59
CCDC66-219ENST00000484441 FCGR1AP12314 374 aa5.15□□□□□ -1.59
CCDC66-219ENST00000484441 ZNF12P17014 697 aa5.15□□□□□ -1.59
CCDC66-219ENST00000484441 TTKP33981 857 aa5.15□□□□□ -1.59
CCDC66-219ENST00000484441 ARSFP54793 590 aa5.15□□□□□ -1.59
CCDC66-219ENST00000484441 MYBPC2Q14324 1141 aa5.15□□□□□ -1.59
CCDC66-219ENST00000484441 ANKRD1Q15327 319 aa5.15□□□□□ -1.59
CCDC66-219ENST00000484441 LDHAL6AQ6ZMR3 332 aa5.15□□□□□ -1.59
CCDC66-219ENST00000484441 PALB2Q86YC2 1186 aa5.15□□□□□ -1.59
CCDC66-219ENST00000484441 DCP1BQ8IZD4 617 aaKnown RBP5.15□□□□□ -1.59
CCDC66-219ENST00000484441 SMRP1Q8NCR6 262 aa5.15□□□□□ -1.59
CCDC66-219ENST00000484441 GPT2Q8TD30 523 aa5.15□□□□□ -1.59
CCDC66-219ENST00000484441 RAB40AQ8WXH6 277 aa5.15□□□□□ -1.59
CCDC66-219ENST00000484441 TM6SF1Q9BZW5 370 aa5.15□□□□□ -1.59
CCDC66-219ENST00000484441 CLK4Q9HAZ1 481 aaKnown RBP5.15□□□□□ -1.59
CCDC66-219ENST00000484441 ENTPD7Q9NQZ7 604 aa5.15□□□□□ -1.59
CCDC66-219ENST00000484441 PROCRQ9UNN8 238 aa5.15□□□□□ -1.59
CCDC66-219ENST00000484441 CNPY2Q9Y2B0 182 aa5.15□□□□□ -1.59
CCDC66-219ENST00000484441 GPR52Q9Y2T5 361 aa5.15□□□□□ -1.59
CCDC66-219ENST00000484441 CNTNAP2Q9UHC6 1331 aa5.15□□□□□ -1.59
CCDC66-219ENST00000484441 DOCK7Q96N67 2140 aa5.14□□□□□ -1.59
CCDC66-219ENST00000484441 EBAG9O00559 213 aa5.14□□□□□ -1.59
CCDC66-219ENST00000484441 PIP5K1CO60331 668 aa5.14□□□□□ -1.59
CCDC66-219ENST00000484441 PAPSS2O95340 614 aaPredicted RBP5.14□□□□□ -1.59
CCDC66-219ENST00000484441 PRSS2P07478 247 aa5.14□□□□□ -1.59
CCDC66-219ENST00000484441 CKMT1AP12532 417 aa5.14□□□□□ -1.59
CCDC66-219ENST00000484441 BNC1Q01954 994 aa5.14□□□□□ -1.59
CCDC66-219ENST00000484441 ST3GAL1Q11201 340 aa5.14□□□□□ -1.59
CCDC66-219ENST00000484441 CTTNQ14247 550 aaKnown RBP5.14□□□□□ -1.59
CCDC66-219ENST00000484441 MAP3K21Q5TCX8 1036 aa5.14□□□□□ -1.59
CCDC66-219ENST00000484441 BBS12Q6ZW61 710 aa5.14□□□□□ -1.59
CCDC66-219ENST00000484441 GHDCQ8N2G8 530 aa5.14□□□□□ -1.59
CCDC66-219ENST00000484441 MIGA1Q8NAN2 632 aa5.14□□□□□ -1.59
CCDC66-219ENST00000484441 OR14A16Q8NHC5 309 aa5.14□□□□□ -1.59
CCDC66-219ENST00000484441 TBC1D22AQ8WUA7 517 aa5.14□□□□□ -1.59
CCDC66-219ENST00000484441 COG8Q96MW5 612 aa5.14□□□□□ -1.59
CCDC66-219ENST00000484441 PYM1Q9BRP8 204 aaKnown RBP5.14□□□□□ -1.59
CCDC66-219ENST00000484441 HERPUD2Q9BSE4 406 aa5.14□□□□□ -1.59
CCDC66-219ENST00000484441 CBY3A6NI87 242 aa5.13□□□□□ -1.59
CCDC66-219ENST00000484441 CHL1O00533 1208 aa5.13□□□□□ -1.59
CCDC66-219ENST00000484441 TSPAN3O60637 253 aa5.13□□□□□ -1.59
CCDC66-219ENST00000484441 CD72P21854 359 aa5.13□□□□□ -1.59
CCDC66-219ENST00000484441 ITGB8P26012 769 aa5.13□□□□□ -1.59
CCDC66-219ENST00000484441 HALP42357 657 aa5.13□□□□□ -1.59
CCDC66-219ENST00000484441 PDLIM4P50479 330 aa5.13□□□□□ -1.59
CCDC66-219ENST00000484441 ART1P52961 327 aa5.13□□□□□ -1.59
CCDC66-219ENST00000484441 TBL3Q12788 808 aaKnown RBP5.13□□□□□ -1.59
CCDC66-219ENST00000484441 PLEKHO1Q53GL0 409 aaPredicted RBP5.13□□□□□ -1.59
CCDC66-219ENST00000484441 EFHC1Q5JVL4 640 aa5.13□□□□□ -1.59
CCDC66-219ENST00000484441 ANKRD45Q5TZF3 282 aa5.13□□□□□ -1.59
CCDC66-219ENST00000484441 DENND6AQ8IWF6 608 aa5.13□□□□□ -1.59
CCDC66-219ENST00000484441 LSM14AQ8ND56 463 aaKnown RBP5.13□□□□□ -1.59
CCDC66-219ENST00000484441 HSPH1Q92598 858 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms